Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g06310.t01
CDS Infomation

cds chromosome:12X:17:6845904:6848869:1 gene:VIT_17s0000g06310 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCAGGAGCCCAAGGACCCCGCGTTTAAGCTCTTTGGCAAAACCATACCCATGCTAGCG
GACGGCGATGCTCCGGTCAGCTCAGGTGATGTTGGAGACTCTGGCGCTGCTGTTGCCCGT
GAAGATGGTCTTGAAGAAGAAACTGAGAAGGATGCCCTGGGAGGAAAACCTGCTGAGACC
AAAGGAGAAGATGGTTCAGAGGAGTCAAGGAATTCAGAAACAGTGGCAGAGAGCAATGAG
AACCCTAAAACACCCTCTATTGCTGAAGAAAATGTAACACTAAAAACTTCCAAGGCGGAA
AAAGGACAAAGTGATAGTCCTGATTCTCAAGAGAAAACCCTGAAGAAGCCAGACAAAATC
CTTCCATGCCCCCGCTGTAATAGCATGGACACAAAGTTCTGTTATTACAACAATTACAAC
ATTAACCAACCCCGTCACTTCTGCAAAAGCTGCCAGAGGTATTGGACTGCTGGGGGTACC
ATGAGGAATGTTCCAGTGGGAGCTGGCCGTCGAAAGAACAAGAATTCTGCCTCGCATTAT
CGACATATCACCATCTCTGAAGCACTCCAAACTGTTCGAATTGAGGCTACTAATGGGGTG
CACCAACCAACTTTGAAAAGCAATGGCACAGTACTGACTTTTGGCTCGGATGCACCCTTT
TGTGATTCCATGACTTCTGTTTTAAATCTTGAGGAGAAAAAGATGCCTAATGGGGCCCGA
AACGGGTTTCATACACACGAAGAACAGGGAATTCCAGTTTCTTTCAGAGTTCAGGAAAAT
GGTGATGATCACTCTAGTGCATCTTCTATCACCGTTTCAAATTCATCGGAGGAAGGAAGC
AAGTATGGGCTACATGAGGCAAAGCGAAATTCCCATGGTGTACCTTCTCGAATTCCATGT
ATCCCTGGGATTCCCTGGCCTTATCCTTGGAATTCTGCAGTGCCTCCACCTTTCTGTCCT
CCAGGTTTTCCTATGCCATTCTATCCTGCAGCCTATTGGAATTGTCATGTTACGGCCCCT
TGGAACATTCCTTGGTTGTCTCCACCATCTTCTTCTGCAAACCAAAAGACTCCAAACTCC
AGACAAAATTCTCCAACCTTAGGGAAGCATTCAAGGGAAGGGGACATTCTTAAACCAAGC
ATTGTGGAGGATGAAGAGACCCCAAAACAGAGGAGTTCAGAGAGATGCCTCTGGGTTCCA
AAGACCTTGAGAATTGATGATCCTGCTGAAGCTGCAAAGAGTTCCATATGGACAACGCTC
GGGATTAAGAATGACAAGGTTGATTCAGTCAGCGGAGGAGGGCTCTTCAATGCCTTCCAC
TTGAAGGGTGATGATAAAAATCATGCTATTGACACCTCTGCCGTGTTGCGGGCTAACCCT
GCAGCCTTGTCTCGGTCACTCAACTTCCAAGAGAGCTCTTAA

Peptide Sequence

PEP ID

VIT_17s0000g06310.t01
PEP Infomation

pep chromosome:12X:17:6845904:6848869:1 gene:VIT_17s0000g06310 transcript:VIT_17s0000g06310.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MQEPKDPAFKLFGKTIPMLADGDAPVSSGDVGDSGAAVAREDGLEEETEKDALGGKPAET
KGEDGSEESRNSETVAESNENPKTPSIAEENVTLKTSKAEKGQSDSPDSQEKTLKKPDKI
LPCPRCNSMDTKFCYYNNYNINQPRHFCKSCQRYWTAGGTMRNVPVGAGRRKNKNSASHY
RHITISEALQTVRIEATNGVHQPTLKSNGTVLTFGSDAPFCDSMTSVLNLEEKKMPNGAR
NGFHTHEEQGIPVSFRVQENGDDHSSASSITVSNSSEEGSKYGLHEAKRNSHGVPSRIPC
IPGIPWPYPWNSAVPPPFCPPGFPMPFYPAAYWNCHVTAPWNIPWLSPPSSSANQKTPNS
RQNSPTLGKHSREGDILKPSIVEDEETPKQRSSERCLWVPKTLRIDDPAEAAKSSIWTTL
GIKNDKVDSVSGGGLFNAFHLKGDDKNHAIDTSAVLRANPAALSRSLNFQESS

Transcript Sequence

Transcript ID

VIT_17s0000g06310.t01
Transcript Infomation

cdna chromosome:12X:17:6845904:6848869:1 gene:VIT_17s0000g06310 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCGACGACTCCTCTCTCACTCGCCTAAATTTTCTCTGTTTTTTTTTTTTTCCCTTCTCGA
AATTTTGGCGCCTTGTTTGGTCACCGAGAAAATGCAGGAGCCCAAGGACCCCGCGTTTAA
GCTCTTTGGCAAAACCATACCCATGCTAGCGGACGGCGATGCTCCGGTCAGCTCAGGTGA
TGTTGGAGACTCTGGCGCTGCTGTTGCCCGTGAAGATGGTCTTGAAGAAGAAACTGAGAA
GGATGCCCTGGGAGGAAAACCTGCTGAGACCAAAGGAGAAGATGGTTCAGAGGAGTCAAG
GAATTCAGAAACAGTGGCAGAGAGCAATGAGAACCCTAAAACACCCTCTATTGCTGAAGA
AAATGTAACACTAAAAACTTCCAAGGCGGAAAAAGGACAAAGTGATAGTCCTGATTCTCA
AGAGAAAACCCTGAAGAAGCCAGACAAAATCCTTCCATGCCCCCGCTGTAATAGCATGGA
CACAAAGTTCTGTTATTACAACAATTACAACATTAACCAACCCCGTCACTTCTGCAAAAG
CTGCCAGAGGTATTGGACTGCTGGGGGTACCATGAGGAATGTTCCAGTGGGAGCTGGCCG
TCGAAAGAACAAGAATTCTGCCTCGCATTATCGACATATCACCATCTCTGAAGCACTCCA
AACTGTTCGAATTGAGGCTACTAATGGGGTGCACCAACCAACTTTGAAAAGCAATGGCAC
AGTACTGACTTTTGGCTCGGATGCACCCTTTTGTGATTCCATGACTTCTGTTTTAAATCT
TGAGGAGAAAAAGATGCCTAATGGGGCCCGAAACGGGTTTCATACACACGAAGAACAGGG
AATTCCAGTTTCTTTCAGAGTTCAGGAAAATGGTGATGATCACTCTAGTGCATCTTCTAT
CACCGTTTCAAATTCATCGGAGGAAGGAAGCAAGTATGGGCTACATGAGGCAAAGCGAAA
TTCCCATGGTGTACCTTCTCGAATTCCATGTATCCCTGGGATTCCCTGGCCTTATCCTTG
GAATTCTGCAGTGCCTCCACCTTTCTGTCCTCCAGGTTTTCCTATGCCATTCTATCCTGC
AGCCTATTGGAATTGTCATGTTACGGCCCCTTGGAACATTCCTTGGTTGTCTCCACCATC
TTCTTCTGCAAACCAAAAGACTCCAAACTCCAGACAAAATTCTCCAACCTTAGGGAAGCA
TTCAAGGGAAGGGGACATTCTTAAACCAAGCATTGTGGAGGATGAAGAGACCCCAAAACA
GAGGAGTTCAGAGAGATGCCTCTGGGTTCCAAAGACCTTGAGAATTGATGATCCTGCTGA
AGCTGCAAAGAGTTCCATATGGACAACGCTCGGGATTAAGAATGACAAGGTTGATTCAGT
CAGCGGAGGAGGGCTCTTCAATGCCTTCCACTTGAAGGGTGATGATAAAAATCATGCTAT
TGACACCTCTGCCGTGTTGCGGGCTAACCCTGCAGCCTTGTCTCGGTCACTCAACTTCCA
AGAGAGCTCTTAATTGAGTCGTAGTGTCATATAAATATGAAGGGCAAGGTTGAATTCAAA
TCACAAATTTGAACGCCCTTAATGTCCTCTTGCTTAGTCCTTGTTGCAAACCTAATTGGC
AAGCTAATTGACTGGGAGGAAGAGGTGGAGGATGACTGATCATTTCCCTAATGGGACAGG
GTAGTTTATCTTAGAGAAGCTCAAGTAGCAACAGTTTCTTCTTGTAACTGTATGAGAAGG
TGCCTTTTGATTTGCTTAGGGGTACTGAGTTTTCATTCATGTACATATACTTTCCACATA
TATGGAATACTGAGATAGATATGCAGATTACCAAGTCTGTAAAATGGTTCATTTTCCCC