Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g06220.t01
CDS Infomation

cds chromosome:12X:17:6778775:6782507:1 gene:VIT_17s0000g06220 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTGAAAAGAGCATGCTACCCTCCAGGTTTCTTTTCTGCCTAATAACCATTTCCATG
TTCCTTCTGATCCTTTCTTCTTTGTTCCTCCTTCAATTTAGCAATACTTCTTTCATACCC
AATTCAGTTTTCAAGTTAATTCTTGTTAATAGCACATCAGTTTACTTCAAATCCAGTGGA
AAAAATGAACAAACTAAGCTTCCTTTCGTTACTTCCGTAGCTTCACCTGTTGATAGTAAA
AGACCCATGGGAAGAGAGGGGAGTTGTCAAATTTCCAATGCAAGCAAGAAAATGGATGCT
TTAGGGCAAGGTAGAAGGAAGGGTTGTGACCCAAATCAAGCTCACCTTCGGGCATTTATG
TATGACTTGCCTCCTGAATTTCATTTTGGATTATTGGGTTGGACAGGAAAGGCAAATCAG
ATATGGCCAAATGTTAGTAATCCAGGTCGAATCCCATCATATCCAGGTGGATTGAATTTA
CAGCACAGTATAGAGTATTGGCTAACCCTTGATCTTCTATCATCTGATACTCCGAATATA
GTTAGACCTTGCAGTGCAATCAGAGTGAAGAATTCAAGTCAAGCAGATATAATCTTTGTG
CCATTCTTTTCATCTCTGAGCTACAACAGGCATTCTAGGCTTCATGGAAAGGAAAAAGTT
AGTGTTAACAAGATGTTGCAGGATAAATTGGTGAATTTTTTAATGGGTCAGGATGAATGG
AAGCAATTGGGTGGGAAGAACCATCTAATTGTAGCTCACCATCCAAATAGCATGTTGGAT
GCAAGAAAGAAGCTAGGTTCTGCCATGTTTGTGCTTGCAGATTTTGGAAGGTACCCGGTT
GAAATAGCAAATATTGACAAGGATGTGATCGCCCCTTACAAGCATGTTCTGAGGAGCAAT
CCTGTGGCAGATTCAGCCACATTTGAGGGGCGTCCCCTATTAGTGTATTTTCAAGGGGCA
ATTTATAGAAAAGATGGAGGAGCTATACGCCAGGAACTATATTATCTTCTCAGAGATGAG
AAAGATGTACATTTCACGTTTGGTAGCGTTCGAGGGAATGGGATCAACGGTGCAAGTGAA
GGGATGGCATCATCCAAATTCTGCTTGAATATTGCTGGAGACACCCCATCCTCAAATCGC
CTCTTTGATGCCATTGTGAGCCATTGTGTTCCTGTCATAATAAGTGATGAAATTGAGCTA
CCATTTGAAGATGTTTTGGATTACTCTGAGTTCTGCATATTTGTCCGTGCATCTGATGCT
GTAAAAAATGGGTTCCTACTGAATCTTCTTAGGGGAATCAAGAGAGAGAAGTGGACCAAA
ATGTGGGAGAGATTAAAGGAGATTGCTCACCACTTTGAATATCAATATCCATCTCAGGCA
GGTGATGCTGTGGATATGATTTGGGGGGCAGTTTCACGCAAGATATCTTCAATTCAAAAC
AAACTCCACAGGAAGAATAGATACCGCAGATCTCAGATTCTGCTAAAGAGGAATTGA

Peptide Sequence

PEP ID

VIT_17s0000g06220.t01
PEP Infomation

pep chromosome:12X:17:6778775:6782507:1 gene:VIT_17s0000g06220 transcript:VIT_17s0000g06220.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSEKSMLPSRFLFCLITISMFLLILSSLFLLQFSNTSFIPNSVFKLILVNSTSVYFKSSG
KNEQTKLPFVTSVASPVDSKRPMGREGSCQISNASKKMDALGQGRRKGCDPNQAHLRAFM
YDLPPEFHFGLLGWTGKANQIWPNVSNPGRIPSYPGGLNLQHSIEYWLTLDLLSSDTPNI
VRPCSAIRVKNSSQADIIFVPFFSSLSYNRHSRLHGKEKVSVNKMLQDKLVNFLMGQDEW
KQLGGKNHLIVAHHPNSMLDARKKLGSAMFVLADFGRYPVEIANIDKDVIAPYKHVLRSN
PVADSATFEGRPLLVYFQGAIYRKDGGAIRQELYYLLRDEKDVHFTFGSVRGNGINGASE
GMASSKFCLNIAGDTPSSNRLFDAIVSHCVPVIISDEIELPFEDVLDYSEFCIFVRASDA
VKNGFLLNLLRGIKREKWTKMWERLKEIAHHFEYQYPSQAGDAVDMIWGAVSRKISSIQN
KLHRKNRYRRSQILLKRN

Transcript Sequence

Transcript ID

VIT_17s0000g06220.t01
Transcript Infomation

cdna chromosome:12X:17:6778775:6782507:1 gene:VIT_17s0000g06220 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGATAATTAAATGCCTTAAGTGAAGCTGACGATCCAGTAGAATAGAATGATTTGTAGCAC
AGTGAGGACACACCACCCTTTTTGCTGTCCCAAAGAACAAAAAAAATTATCAGCAGGGAA
TGGAATCTGAAAACCCCAGTTGATCAGGCGCTCTTCCTATTGGTTGTACCCCTTAGATGG
CGAATCCAAGAACAGAAGCTAATGGTTTTTGAGAGTATATGGAATTCAGCCATTCATATT
GAGCAAGCTTGCAAAACACGATATATGAACATGCTCTAGAAAAGGAAATTTTTATCTGGG
ATTGACCGGTTACTGTGGTCAGAGTCTCAGAGATGGTTGTTTTTTTGTAGGGAAACTTGG
TATGGAAAAATACCCCTGAAATCATTTTCCAAAACCCTCTGGGGTTTTTAAAGCAGGCAC
TGGGTTTACTTTTCATTCTGGAGATTGGGTAGTTCCCTTTTGGTGTTCTTTGTGGAAATC
AAGCTGCTCATGTTAATGGGTAGGAGTTGAACCCTTTTTTTTTTTCAATGATCATCTTCT
CAATGAATTCATTAAGAAACTTAAAACCCTTTGTTTTATTCTGTAGAATCTGGGTACCCT
GCTTCTAAAGAAACGGATACTTTGATTATCTTCCTTCTCTTAATGTAGCATTTGCTGCAG
TTTTAAACTCTCTAAGTTTCGCTTTCCCTATATTTCGCCAATGTCTGAAAAGAGCATGCT
ACCCTCCAGGTTTCTTTTCTGCCTAATAACCATTTCCATGTTCCTTCTGATCCTTTCTTC
TTTGTTCCTCCTTCAATTTAGCAATACTTCTTTCATACCCAATTCAGTTTTCAAGTTAAT
TCTTGTTAATAGCACATCAGTTTACTTCAAATCCAGTGGAAAAAATGAACAAACTAAGCT
TCCTTTCGTTACTTCCGTAGCTTCACCTGTTGATAGTAAAAGACCCATGGGAAGAGAGGG
GAGTTGTCAAATTTCCAATGCAAGCAAGAAAATGGATGCTTTAGGGCAAGGTAGAAGGAA
GGGTTGTGACCCAAATCAAGCTCACCTTCGGGCATTTATGTATGACTTGCCTCCTGAATT
TCATTTTGGATTATTGGGTTGGACAGGAAAGGCAAATCAGATATGGCCAAATGTTAGTAA
TCCAGGTCGAATCCCATCATATCCAGGTGGATTGAATTTACAGCACAGTATAGAGTATTG
GCTAACCCTTGATCTTCTATCATCTGATACTCCGAATATAGTTAGACCTTGCAGTGCAAT
CAGAGTGAAGAATTCAAGTCAAGCAGATATAATCTTTGTGCCATTCTTTTCATCTCTGAG
CTACAACAGGCATTCTAGGCTTCATGGAAAGGAAAAAGTTAGTGTTAACAAGATGTTGCA
GGATAAATTGGTGAATTTTTTAATGGGTCAGGATGAATGGAAGCAATTGGGTGGGAAGAA
CCATCTAATTGTAGCTCACCATCCAAATAGCATGTTGGATGCAAGAAAGAAGCTAGGTTC
TGCCATGTTTGTGCTTGCAGATTTTGGAAGGTACCCGGTTGAAATAGCAAATATTGACAA
GGATGTGATCGCCCCTTACAAGCATGTTCTGAGGAGCAATCCTGTGGCAGATTCAGCCAC
ATTTGAGGGGCGTCCCCTATTAGTGTATTTTCAAGGGGCAATTTATAGAAAAGATGGAGG
AGCTATACGCCAGGAACTATATTATCTTCTCAGAGATGAGAAAGATGTACATTTCACGTT
TGGTAGCGTTCGAGGGAATGGGATCAACGGTGCAAGTGAAGGGATGGCATCATCCAAATT
CTGCTTGAATATTGCTGGAGACACCCCATCCTCAAATCGCCTCTTTGATGCCATTGTGAG
CCATTGTGTTCCTGTCATAATAAGTGATGAAATTGAGCTACCATTTGAAGATGTTTTGGA
TTACTCTGAGTTCTGCATATTTGTCCGTGCATCTGATGCTGTAAAAAATGGGTTCCTACT
GAATCTTCTTAGGGGAATCAAGAGAGAGAAGTGGACCAAAATGTGGGAGAGATTAAAGGA
GATTGCTCACCACTTTGAATATCAATATCCATCTCAGGCAGGTGATGCTGTGGATATGAT
TTGGGGGGCAGTTTCACGCAAGATATCTTCAATTCAAAACAAACTCCACAGGAAGAATAG
ATACCGCAGATCTCAGATTCTGCTAAAGAGGAATTGAGATGACAACTGCCCACTTGAAAG
ATTGAGATACTTCCTGTCCCCAAATTCTGTATCTGATTGGGCTGGTTGTCAATTCCAAGT
AAGGACAGAAGCTGAGTTTTGTTAAGAGATGCATGGCTCTGTATTAGCTACTTCTAGTCA
TACTCATAAATTGGAGATTTTTCTTGTAGTCTAGTTTTTACACAGAA