Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g06050.t01
CDS Infomation

cds chromosome:12X:17:6616986:6621517:-1 gene:VIT_17s0000g06050 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGAAAAAAGGAAATGCAGCAGAAAGTAAAACTAGGAGCTCTATTTCCATCTTTGTT
GTATTGGGTCTGTGTTGTTTCTTCTATATTTTGGGTGCATGGCAACGAAGTGGTTTTGGG
AAGGGAGACAGCATAGCCATTGAAGTCACCAAACAAACGGACTGCAGTATCCTCTCCAAT
TTGAATTTTGAGACTCATCATAAAGATGAAGCAGGGACAATTGGCGACCAGTTCAAGCCA
TGTGATGCTCAGTACATTGATTACACACCATGCCAAGATCAAGACAGAGCAATGACGTTC
CCCCGAGAAGATATGAACTATAGAGAAAGACATTGTCCTCCAGAGGGAGAGAAACTTCAT
TGCCTTATCCCTGCACCCAAAGGATACGCTACACCATTCCCATGGCCAAAGAGCCGTGAT
TATGTACCCTTTGCAAATGCACCATATAAGAACTTGACTGTTGAGAAGGCTGTTCAGAAC
TGGATTCAATATGAGGGCAACGTGTTTAGGTTCCCAGGTGGTGGAACACAGTTTCCTCGT
GGAGCAGATGCATATATTGATGAACTTGCTTCTGTGATACCATTTGAAAATGGGATGGTT
AGAACAGCATTGGACACTGGTTGTGGGGTTGCAAGTTGGGGTGCATACTTGTTTAAAAAG
AATGTTATAGCCATGTCATTTGCACCAAGAGACTCACATGTAGCTCAAGTTCAATTTGCT
TTGGAGAGAGGTGTGCCAGCAGTTATTGGTGTTCTTGGAACTATAAAGCTACCATATCCA
TCTGGAGCCTTCGACATGGCTCACTGTTCTCGTTGCTTGATTCCATGGGGTGCAAATGAT
GGAATGTACATGATGGAAGTTGATCGAGTTCTTAGACCAGGTGGTTACTGGGTTCTTTCT
GGCCCTCCCATCAGCTGGAATATTAATTACCGAGCATGGCAGCGCCCTAAAGAGGATCTC
CAGGAGGAACAGAGCAAGATTGAAGAGATTGCCAAACTTCTTTGCTGGGAAAAGAAGTAT
GAGAAGGGTGAAATAGCTATCTGGAGGAAAAGAATAAATCATGATAGTTGCAGTGAGCAA
GATTCACACGTTACCTTTTGTGAAGCTACAAATGCAAACGATGTCTGGTACAAGCAGATG
GAGGCCTGCGTAACTCCTTATCCTAAGACTACAGAAGCAGATGAAGTTGCTGGTGGTGTA
TGGAAGCCATTTCCTGAGAGACTGAATGCCGTTCCCTTCAGGATATCCAGTGGATCCATC
CCTGGAGTCTCTGATGAGACTTTCCAGGAGGATGACAAATTGTGGAAGAAGCATGTCAAA
GCTTATAAAAGAACCAATAAGATCATTGACTCAGGAAGGTATCGCAACATCATGGATATG
AATGCTGGTCTGGGCAGTTTTGCTGCAGCACTTGAATCACCCAAATTGTGGGTGATGAAT
GTTATGCCTACAATAGCTGAAAAAGACACTCTGGGTGTCATTTATGAACGAGGATTGATC
GGCATATACCATGATTGGTGTGAAGCTTTCTCAACTTACCCAAGGACATATGACCTAATT
CATGCAAATGGTGTTTTCAGCTTGTACAAGAACAGTTGTAGTGCGGAAGACATTCTTCTG
GAGATGGATCGCATCCTACGGCCTGAAGGAGCAGTCATATTCCGTGATCAAATAGACGTG
CTCATCAAGGTGAAAAAGATCGTAGGAGGAATGAGGTGGAACACTAAATTAGTGGATCAT
GAAGATGGCCCCCTTGTCTCTGAAAAGATATTGTTTGCTGTCAAACAGTACTGGGTTGTA
GGTGAAAACAACTCCACAGCAGCTCCACAGTGA

Peptide Sequence

PEP ID

VIT_17s0000g06050.t01
PEP Infomation

pep chromosome:12X:17:6616986:6621517:-1 gene:VIT_17s0000g06050 transcript:VIT_17s0000g06050.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAKKGNAAESKTRSSISIFVVLGLCCFFYILGAWQRSGFGKGDSIAIEVTKQTDCSILSN
LNFETHHKDEAGTIGDQFKPCDAQYIDYTPCQDQDRAMTFPREDMNYRERHCPPEGEKLH
CLIPAPKGYATPFPWPKSRDYVPFANAPYKNLTVEKAVQNWIQYEGNVFRFPGGGTQFPR
GADAYIDELASVIPFENGMVRTALDTGCGVASWGAYLFKKNVIAMSFAPRDSHVAQVQFA
LERGVPAVIGVLGTIKLPYPSGAFDMAHCSRCLIPWGANDGMYMMEVDRVLRPGGYWVLS
GPPISWNINYRAWQRPKEDLQEEQSKIEEIAKLLCWEKKYEKGEIAIWRKRINHDSCSEQ
DSHVTFCEATNANDVWYKQMEACVTPYPKTTEADEVAGGVWKPFPERLNAVPFRISSGSI
PGVSDETFQEDDKLWKKHVKAYKRTNKIIDSGRYRNIMDMNAGLGSFAAALESPKLWVMN
VMPTIAEKDTLGVIYERGLIGIYHDWCEAFSTYPRTYDLIHANGVFSLYKNSCSAEDILL
EMDRILRPEGAVIFRDQIDVLIKVKKIVGGMRWNTKLVDHEDGPLVSEKILFAVKQYWVV
GENNSTAAPQ

Transcript Sequence

Transcript ID

VIT_17s0000g06050.t01
Transcript Infomation

cdna chromosome:12X:17:6616986:6621517:-1 gene:VIT_17s0000g06050 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTAGGTGCATCATGGCGAAAAAAGGAAATGCAGCAGAAAGTAAAACTAGGAGCTCTATTT
CCATCTTTGTTGTATTGGGTCTGTGTTGTTTCTTCTATATTTTGGGTGCATGGCAACGAA
GTGGTTTTGGGAAGGGAGACAGCATAGCCATTGAAGTCACCAAACAAACGGACTGCAGTA
TCCTCTCCAATTTGAATTTTGAGACTCATCATAAAGATGAAGCAGGGACAATTGGCGACC
AGTTCAAGCCATGTGATGCTCAGTACATTGATTACACACCATGCCAAGATCAAGACAGAG
CAATGACGTTCCCCCGAGAAGATATGAACTATAGAGAAAGACATTGTCCTCCAGAGGGAG
AGAAACTTCATTGCCTTATCCCTGCACCCAAAGGATACGCTACACCATTCCCATGGCCAA
AGAGCCGTGATTATGTACCCTTTGCAAATGCACCATATAAGAACTTGACTGTTGAGAAGG
CTGTTCAGAACTGGATTCAATATGAGGGCAACGTGTTTAGGTTCCCAGGTGGTGGAACAC
AGTTTCCTCGTGGAGCAGATGCATATATTGATGAACTTGCTTCTGTGATACCATTTGAAA
ATGGGATGGTTAGAACAGCATTGGACACTGGTTGTGGGGTTGCAAGTTGGGGTGCATACT
TGTTTAAAAAGAATGTTATAGCCATGTCATTTGCACCAAGAGACTCACATGTAGCTCAAG
TTCAATTTGCTTTGGAGAGAGGTGTGCCAGCAGTTATTGGTGTTCTTGGAACTATAAAGC
TACCATATCCATCTGGAGCCTTCGACATGGCTCACTGTTCTCGTTGCTTGATTCCATGGG
GTGCAAATGATGGAATGTACATGATGGAAGTTGATCGAGTTCTTAGACCAGGTGGTTACT
GGGTTCTTTCTGGCCCTCCCATCAGCTGGAATATTAATTACCGAGCATGGCAGCGCCCTA
AAGAGGATCTCCAGGAGGAACAGAGCAAGATTGAAGAGATTGCCAAACTTCTTTGCTGGG
AAAAGAAGTATGAGAAGGGTGAAATAGCTATCTGGAGGAAAAGAATAAATCATGATAGTT
GCAGTGAGCAAGATTCACACGTTACCTTTTGTGAAGCTACAAATGCAAACGATGTCTGGT
ACAAGCAGATGGAGGCCTGCGTAACTCCTTATCCTAAGACTACAGAAGCAGATGAAGTTG
CTGGTGGTGTATGGAAGCCATTTCCTGAGAGACTGAATGCCGTTCCCTTCAGGATATCCA
GTGGATCCATCCCTGGAGTCTCTGATGAGACTTTCCAGGAGGATGACAAATTGTGGAAGA
AGCATGTCAAAGCTTATAAAAGAACCAATAAGATCATTGACTCAGGAAGGTATCGCAACA
TCATGGATATGAATGCTGGTCTGGGCAGTTTTGCTGCAGCACTTGAATCACCCAAATTGT
GGGTGATGAATGTTATGCCTACAATAGCTGAAAAAGACACTCTGGGTGTCATTTATGAAC
GAGGATTGATCGGCATATACCATGATTGGTGTGAAGCTTTCTCAACTTACCCAAGGACAT
ATGACCTAATTCATGCAAATGGTGTTTTCAGCTTGTACAAGAACAGTTGTAGTGCGGAAG
ACATTCTTCTGGAGATGGATCGCATCCTACGGCCTGAAGGAGCAGTCATATTCCGTGATC
AAATAGACGTGCTCATCAAGGTGAAAAAGATCGTAGGAGGAATGAGGTGGAACACTAAAT
TAGTGGATCATGAAGATGGCCCCCTTGTCTCTGAAAAGATATTGTTTGCTGTCAAACAGT
ACTGGGTTGTAGGTGAAAACAACTCCACAGCAGCTCCACAGTGAATTCAAAAGAGGGAAC
TTTCAGTGTGATTTTATCAAGCAATGTTGCTACCTCTGATTCAAGTCCATCAATTTCATT
TATCTCACTCATGGGTATCTGGCCGAGTAACAAACATAGGGGATATGATTCTTACATTAT
CACATGTTGATTAATTCATTGATTGCCCCATGTTCTACCATTGCCATTGTTGATGGTACT
AGTTCGCAAGGTTCTATGGTTTTAGATGGCCTTCTATTTTTATGTTTGTTTGAGGTTCTA
GAGATGCTGTTTATGTTGTTTTAGGCTTGGGCTAAATTATTTCTCTAGTTTTGCATGTGG
TATGCCCTGCCATGATCAGTATGCTGATTTCTAAACCTTTTGGAATGTCTCTTTCCCTTT
TCAATGCTTATATATCAATTTTGCAATATA