Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g05870.t01
CDS Infomation

cds chromosome:12X:17:6410692:6413316:1 gene:VIT_17s0000g05870 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aldose 1-epimerase [Source:UniProtKB/TrEMBL;Acc:D7SIE1]
Sequence

ATGGCTAAGATTCGTGAGTTGTGTTGCTTTCTCTTACTGGCATTTGCGATTGCTAAGGTT
TCTGAGGCAAGTAGTGAAATCGGGGTGTATGAATTGAAGAGGGGAAATTTCTCTGTCAAG
CTCACCAACTATGGCGCCACTGTTGTCTCTGTTATTCTCCCTGATAGGAATGGAAAATTG
GACGACGTCGTTCTTGGATTTGACTCCGTTGAAGACTATAAGAACGATACAACCTACTTC
GGCGCTATTGTGGGACGTGTGGCGAACCGAATTAAAGGGGCTCAGTTTACTCTGAATGGC
AAAAAATACAAGTTGGTTCCCAATGAGGGAAAGAACATGCTCCATGGTGGCCCCAAAGGA
TTCAGTGATGTGATATGGCATGTTCAAAGCTATGACAAAAACAGTCACGTTACATTCGTA
TATCACAGCTTTGATGGTGAAGAAGGATTTCCTGGTGATCTTCATGTCTCAGTGACATAT
ATGTTCTTCCAAACGAACAAGTTAGTCATAAAAATGACAGGTAGACCTCTTAACAAGGCC
ACCCCAGTGAATCTGGCCTCCCATAGTTACTGGAACCTTGGGGGCCACAGCAGCGGCGAC
GTCTTCTCACACCAGGTTCAGCTGTTTGCAGACAAGATCACTCCAGTTGATGATGAGCTC
ATTCCCACCGGCAAAATTCTCCCTGTGGAGGGAACTCCGTATGATTTTCTCAACATCCAT
GAAATTAAAACTAGGTTCCATGAATTACCTAGTGGTTATGATATCAATTATGTGCTTAAC
TATGTGGGGAATGAGCACTTCCATAAGGCCGCCGTGGTGTATGAAAGCAAATCGGGGAGG
AAGATGGAGCTGTGGACTAATCAGCCTGGCCTGCAGTTTTATACCAGCAACATGCTGGGG
ACTGTGAAGGGAAAAGGTGGTGTTACTTATAACAATTATGATGGAATATGCTTGGAGACA
CAAGGGTTTCCAGACGCCGTGAATCATCCAGACTTCCCATCACAGATCGTAAATCCTGGG
GAGATTTATGAACATTTTATGGTTTACAGGTTCACAGCCAAGTAG

Peptide Sequence

PEP ID

VIT_17s0000g05870.t01
PEP Infomation

pep chromosome:12X:17:6410692:6413316:1 gene:VIT_17s0000g05870 transcript:VIT_17s0000g05870.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aldose 1-epimerase [Source:UniProtKB/TrEMBL;Acc:D7SIE1]
Sequence

MAKIRELCCFLLLAFAIAKVSEASSEIGVYELKRGNFSVKLTNYGATVVSVILPDRNGKL
DDVVLGFDSVEDYKNDTTYFGAIVGRVANRIKGAQFTLNGKKYKLVPNEGKNMLHGGPKG
FSDVIWHVQSYDKNSHVTFVYHSFDGEEGFPGDLHVSVTYMFFQTNKLVIKMTGRPLNKA
TPVNLASHSYWNLGGHSSGDVFSHQVQLFADKITPVDDELIPTGKILPVEGTPYDFLNIH
EIKTRFHELPSGYDINYVLNYVGNEHFHKAAVVYESKSGRKMELWTNQPGLQFYTSNMLG
TVKGKGGVTYNNYDGICLETQGFPDAVNHPDFPSQIVNPGEIYEHFMVYRFTAK

Transcript Sequence

Transcript ID

VIT_17s0000g05870.t01
Transcript Infomation

cdna chromosome:12X:17:6410692:6413316:1 gene:VIT_17s0000g05870 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aldose 1-epimerase [Source:UniProtKB/TrEMBL;Acc:D7SIE1]
Sequence

ATCATAACTGAAGACTCTTCAGCATTCTCTCGCAGATCTCCATCCCTATCGATAAATATA
TTATCTCTTTGTTGAAGACTCTTCATCTGAAATGGCTAAGATTCGTGAGTTGTGTTGCTT
TCTCTTACTGGCATTTGCGATTGCTAAGGTTTCTGAGGCAAGTAGTGAAATCGGGGTGTA
TGAATTGAAGAGGGGAAATTTCTCTGTCAAGCTCACCAACTATGGCGCCACTGTTGTCTC
TGTTATTCTCCCTGATAGGAATGGAAAATTGGACGACGTCGTTCTTGGATTTGACTCCGT
TGAAGACTATAAGAACGATACAACCTACTTCGGCGCTATTGTGGGACGTGTGGCGAACCG
AATTAAAGGGGCTCAGTTTACTCTGAATGGCAAAAAATACAAGTTGGTTCCCAATGAGGG
AAAGAACATGCTCCATGGTGGCCCCAAAGGATTCAGTGATGTGATATGGCATGTTCAAAG
CTATGACAAAAACAGTCACGTTACATTCGTATATCACAGCTTTGATGGTGAAGAAGGATT
TCCTGGTGATCTTCATGTCTCAGTGACATATATGTTCTTCCAAACGAACAAGTTAGTCAT
AAAAATGACAGGTAGACCTCTTAACAAGGCCACCCCAGTGAATCTGGCCTCCCATAGTTA
CTGGAACCTTGGGGGCCACAGCAGCGGCGACGTCTTCTCACACCAGGTTCAGCTGTTTGC
AGACAAGATCACTCCAGTTGATGATGAGCTCATTCCCACCGGCAAAATTCTCCCTGTGGA
GGGAACTCCGTATGATTTTCTCAACATCCATGAAATTAAAACTAGGTTCCATGAATTACC
TAGTGGTTATGATATCAATTATGTGCTTAACTATGTGGGGAATGAGCACTTCCATAAGGC
CGCCGTGGTGTATGAAAGCAAATCGGGGAGGAAGATGGAGCTGTGGACTAATCAGCCTGG
CCTGCAGTTTTATACCAGCAACATGCTGGGGACTGTGAAGGGAAAAGGTGGTGTTACTTA
TAACAATTATGATGGAATATGCTTGGAGACACAAGGGTTTCCAGACGCCGTGAATCATCC
AGACTTCCCATCACAGATCGTAAATCCTGGGGAGATTTATGAACATTTTATGGTTTACAG
GTTCACAGCCAAGTAGAAGATTTGAGATT