Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g05830.t01
CDS Infomation

cds chromosome:12X:17:6357705:6361180:-1 gene:VIT_17s0000g05830 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGGAGGCCATCAAAGATCAGCCCTCTGTTCATGGGAAGTCTAAACTTCGGTATCCT
CTGAGATCCGCTACTAAATCCAAGGAGGAGAAACAATCGACGGCAGATACTTCAAACTCT
TCTGCAACCAAGAGGGGAAGAATTGTCTCAAAGGTCAGTCAGAGTGTTAGTGTCCTCGAC
AGCTCTACCAAGGACACAGCAGCCAAGCCGCCTAGAAGATTTTCTATTCCTGCCAAGTCA
AATGTCAGCCCCCACATGAAACCGGCTGGCAACATTACTCCAATTTCTGAGACTAGGGCC
AAGAGGTCTGTTACCAATCAAGGGAAAATTGCCACACCAGTTTCTGATGTTTCCAAATCA
GGGAACCGCAGGAACTCCAGCTATATATCCTCAGCAACATATTGGTTGTCACAGATTAAG
CTATCTGAATCTGCTGCTATGCACTCAATTTCACTTGGTTTCTTCAAACTTGCCTTGGAG
GCTGGATGTAAGCCTCTCCAGAGAATGCGTGAAGAGCTAAAGTCTTATGCACGCCGGAAT
AGCCTTGGTGAACTCGGAGAATCTGTGAAAGAATTATTCAGTAGTTATGAAATTTCAGAG
AACTTGGAGCAGTTGCAGGTTTCTGAAACTTGTTCTCAGGTGCCTGGAGAGGGAACTCGA
TCATCTGATGATGATGTTCACAGCTCTTCTTCTACTAGGAGCACTAGGAAACTGAAACCA
AAGTCCTTGAACACTGATGCTGCTCAAGTTTCTTCAGTCACAGAATCCGCCAATAAGGAG
ACTACTCAGAAGAATAATCCTGCAACTAGAGTCAGGGGGTCATTGAATAAGAATTCAGTG
AATACAAGATCGGTTTCTGACTCTGGGAGCCGTAACTTACAAAGGAAACCCCAGAAGCCA
AGTAAGCAAGACTCTAAAACAGAGAAGGTTGTGATAAAGAAACAAGGAAAGAAATCTGCA
AATGAAGAAGGTCCAGTCAATTCTTTGCCAACAGAGGAAACAACACTTCAAGAAAACAAA
GAAAACATGGATGCCCCTCTGATGGAAGAAACTAGTTTGACTGAAGTAATGTAG

Peptide Sequence

PEP ID

VIT_17s0000g05830.t01
PEP Infomation

pep chromosome:12X:17:6357705:6361180:-1 gene:VIT_17s0000g05830 transcript:VIT_17s0000g05830.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEEAIKDQPSVHGKSKLRYPLRSATKSKEEKQSTADTSNSSATKRGRIVSKVSQSVSVLD
SSTKDTAAKPPRRFSIPAKSNVSPHMKPAGNITPISETRAKRSVTNQGKIATPVSDVSKS
GNRRNSSYISSATYWLSQIKLSESAAMHSISLGFFKLALEAGCKPLQRMREELKSYARRN
SLGELGESVKELFSSYEISENLEQLQVSETCSQVPGEGTRSSDDDVHSSSSTRSTRKLKP
KSLNTDAAQVSSVTESANKETTQKNNPATRVRGSLNKNSVNTRSVSDSGSRNLQRKPQKP
SKQDSKTEKVVIKKQGKKSANEEGPVNSLPTEETTLQENKENMDAPLMEETSLTEVM

Transcript Sequence

Transcript ID

VIT_17s0000g05830.t01
Transcript Infomation

cdna chromosome:12X:17:6357705:6361180:-1 gene:VIT_17s0000g05830 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AATCGAAGCCATTTCTATGGAGGAGGCCATCAAAGATCAGCCCTCTGTTCATGGGAAGTC
TAAACTTCGGTATCCTCTGAGATCCGCTACTAAATCCAAGGAGGAGAAACAATCGACGGC
AGATACTTCAAACTCTTCTGCAACCAAGAGGGGAAGAATTGTCTCAAAGGTCAGTCAGAG
TGTTAGTGTCCTCGACAGCTCTACCAAGGACACAGCAGCCAAGCCGCCTAGAAGATTTTC
TATTCCTGCCAAGTCAAATGTCAGCCCCCACATGAAACCGGCTGGCAACATTACTCCAAT
TTCTGAGACTAGGGCCAAGAGGTCTGTTACCAATCAAGGGAAAATTGCCACACCAGTTTC
TGATGTTTCCAAATCAGGGAACCGCAGGAACTCCAGCTATATATCCTCAGCAACATATTG
GTTGTCACAGATTAAGCTATCTGAATCTGCTGCTATGCACTCAATTTCACTTGGTTTCTT
CAAACTTGCCTTGGAGGCTGGATGTAAGCCTCTCCAGAGAATGCGTGAAGAGCTAAAGTC
TTATGCACGCCGGAATAGCCTTGGTGAACTCGGAGAATCTGTGAAAGAATTATTCAGTAG
TTATGAAATTTCAGAGAACTTGGAGCAGTTGCAGGTTTCTGAAACTTGTTCTCAGGTGCC
TGGAGAGGGAACTCGATCATCTGATGATGATGTTCACAGCTCTTCTTCTACTAGGAGCAC
TAGGAAACTGAAACCAAAGTCCTTGAACACTGATGCTGCTCAAGTTTCTTCAGTCACAGA
ATCCGCCAATAAGGAGACTACTCAGAAGAATAATCCTGCAACTAGAGTCAGGGGGTCATT
GAATAAGAATTCAGTGAATACAAGATCGGTTTCTGACTCTGGGAGCCGTAACTTACAAAG
GAAACCCCAGAAGCCAAGTAAGCAAGACTCTAAAACAGAGAAGGTTGTGATAAAGAAACA
AGGAAAGAAATCTGCAAATGAAGAAGGTCCAGTCAATTCTTTGCCAACAGAGGAAACAAC
ACTTCAAGAAAACAAAGAAAACATGGATGCCCCTCTGATGGAAGAAACTAGTTTGACTGA
AGTAATGTAGACATGCTGCACCAAACATGCTGTGAACTCCTTATAAAACTCTTTTACTCT
TGTTGGATTTTGTCTTCAGTGTTTTTTAGTGAGGGCTTTTCCTTTGTATAGAAAGGGTCA
ATGTGAAAGTGGTGATCCGGTCTGGTGTGAAAGTGAAACTAAGCATTTACTATTCATTTT
CCCTTGTTATTGTCCAGTAAGACTGGGATTGTTTGTGTCTAGTATCATACAGTTATTCTG
GTGATTTAAATTGTATCGAAGTACTAAGCTTCATTTTTGGTGTCCTGATATAAGATAGTA
TATGTTTGCAAGCA