Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g05800.t01
CDS Infomation

cds chromosome:12X:17:6290204:6305722:-1 gene:VIT_17s0000g05800 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGGGGTAGAGTTCCCCAAATTGCTGCTTTGAATTGGTTAGGTTCTCTCAGTCTCTCA
AGATCTATTCATAATTTACCTTTTGCAACCATAGAAGTTGAAGAGATATCAGGTTCTCAA
CCTGCTGAAGTACAAAATTTGGTGCAAGGCAAATGGACAGGATCTACTAGTGGGGAGACA
ATTGTGGATCCTTTAAATGGAGAACCATTCATCCAAGTTGCTGAGGTAGATGAAACAGGA
ATACAGCCATTTGTGGACAGCTTGTCCAAGTGCCCCAAACATGGTCTACATAATCCATTT
AAAGCACCTGAAAGGTATCTCATGTTAGGAGACATATCCAACAAGGCAGCTCACATGCTT
TCCCTGCCCAAGGTTTCCGATTTCTTCACTAGGTTAATACAAAGAGTTGCTCCAAAGAGT
TATCAACAGGCTCTTGGTGAAGTTTATGTTACACAAAAATTTCTGGAGAATTTTTCTGGT
GATCAGGTTCGTTTCCTGGCGAGGTCTTTTGCAGTGCCAGGAAATCATCTTGGGCAGCAA
AGTCATGGTTTTCGTTGGCCTTATGGTCCGGTGGCAATTGTTACACCCTTTAATTTCCCT
TTGGAGATTCCTGTCCTTCAGTTGATGGGAGCCCTTTACATGGGCAACAAACCCATTCTT
AAGGTTGATAGCAAGGTGAGTATTGTTATGGAGCAGATGATTCGATTGCTTCATCATTGT
GGGTTGCCTATGGAGGATCTTGACTTTATAAATTCTGATGGAAAGACAATGAACAAACTA
TTATTGGAGGCAAATCCACGAATGACACTCTTTACTGGTAGTTCCAGAGTGGCAGATAAG
TTAGCTGTTGACCTAAAGGGTCGGATTAAATTGGAAGATGCAGGATTTGACTGGAAAATT
CTGGGACCAGATGTTCAAGAGGTGGACTATGTTGCATGGGTCTGTGATCAAGATGCATAT
GCATGCAGTGGACAAAAGTGCTCTGCGCAGTCAATAGTATTCATGCATGAGAACTGGTTT
AAAAGTTCACTTATTTCCAGAATGAAAGATCTTGCTGCAAGAAGGAAGTTAGAAGATCTA
ACTATTGGACCTGTTCTGAGTTTTACAACTGAAGCAATGCTAGAACATATGAATAAGTTG
CTTCAGATACCAGGATCAGAGCTACTATTTGGTGGCAAGGCTTTAGAAAATCATTCGATC
CCTCCAATTTACGGTGCTCTAAAACCAACAGCCATTTATATTCCGCTTGAAGAAATGCTG
AAGGATGGCAATTATGAGCTTGTTACAAGAGAGATTTTTGGACCATTCCAGGTTGTAACT
GACTATAAAGACAATCAGCTACCCAGGGTGTTGGAAGCACTTGAGAGGATGCATGCACAT
TTAACTGCTGCGGTGGTTTCTAATGATTCCCTGTTTTTGCAGGAAGTGATTGGGAAATCA
GTGAACGGGACTACTTATGCTGGACTAAGGGCAAGAACAACAGGAGCTCCACAGAATCAC
TGGTTTGGACCAGCAGGGGACCCAAGAGGGGCAGGAATTGGGACGCCAGAAGCAATAAAG
CTTGTTTGGTCGTGTCATAGAGAAATCATATATGATATTGGTCCCCTGCCAAGTCACTGG
GAAATTCCACCAGCTACCTGA

Peptide Sequence

PEP ID

VIT_17s0000g05800.t01
PEP Infomation

pep chromosome:12X:17:6290204:6305722:-1 gene:VIT_17s0000g05800 transcript:VIT_17s0000g05800.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MRGRVPQIAALNWLGSLSLSRSIHNLPFATIEVEEISGSQPAEVQNLVQGKWTGSTSGET
IVDPLNGEPFIQVAEVDETGIQPFVDSLSKCPKHGLHNPFKAPERYLMLGDISNKAAHML
SLPKVSDFFTRLIQRVAPKSYQQALGEVYVTQKFLENFSGDQVRFLARSFAVPGNHLGQQ
SHGFRWPYGPVAIVTPFNFPLEIPVLQLMGALYMGNKPILKVDSKVSIVMEQMIRLLHHC
GLPMEDLDFINSDGKTMNKLLLEANPRMTLFTGSSRVADKLAVDLKGRIKLEDAGFDWKI
LGPDVQEVDYVAWVCDQDAYACSGQKCSAQSIVFMHENWFKSSLISRMKDLAARRKLEDL
TIGPVLSFTTEAMLEHMNKLLQIPGSELLFGGKALENHSIPPIYGALKPTAIYIPLEEML
KDGNYELVTREIFGPFQVVTDYKDNQLPRVLEALERMHAHLTAAVVSNDSLFLQEVIGKS
VNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREIIYDIGPLPSHW
EIPPAT

Transcript Sequence

Transcript ID

VIT_17s0000g05800.t01
Transcript Infomation

cdna chromosome:12X:17:6290204:6305722:-1 gene:VIT_17s0000g05800 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATAATTCGTGAGTTGGAATGCAGAAGAGAATTGAGAATTTAGGACGAATCTGTAAACCCT
ATATTGAGTACCGGCCGCCATGTATAGATTCGGAGTATGCAGAGAAATGAGGGGTAGAGT
TCCCCAAATTGCTGCTTTGAATTGGTTAGGTTCTCTCAGTCTCTCAAGATCTATTCATAA
TTTACCTTTTGCAACCATAGAAGTTGAAGAGATATCAGGTTCTCAACCTGCTGAAGTACA
AAATTTGGTGCAAGGCAAATGGACAGGATCTACTAGTGGGGAGACAATTGTGGATCCTTT
AAATGGAGAACCATTCATCCAAGTTGCTGAGGTAGATGAAACAGGAATACAGCCATTTGT
GGACAGCTTGTCCAAGTGCCCCAAACATGGTCTACATAATCCATTTAAAGCACCTGAAAG
GTATCTCATGTTAGGAGACATATCCAACAAGGCAGCTCACATGCTTTCCCTGCCCAAGGT
TTCCGATTTCTTCACTAGGTTAATACAAAGAGTTGCTCCAAAGAGTTATCAACAGGCTCT
TGGTGAAGTTTATGTTACACAAAAATTTCTGGAGAATTTTTCTGGTGATCAGGTTCGTTT
CCTGGCGAGGTCTTTTGCAGTGCCAGGAAATCATCTTGGGCAGCAAAGTCATGGTTTTCG
TTGGCCTTATGGTCCGGTGGCAATTGTTACACCCTTTAATTTCCCTTTGGAGATTCCTGT
CCTTCAGTTGATGGGAGCCCTTTACATGGGCAACAAACCCATTCTTAAGGTTGATAGCAA
GGTGAGTATTGTTATGGAGCAGATGATTCGATTGCTTCATCATTGTGGGTTGCCTATGGA
GGATCTTGACTTTATAAATTCTGATGGAAAGACAATGAACAAACTATTATTGGAGGCAAA
TCCACGAATGACACTCTTTACTGGTAGTTCCAGAGTGGCAGATAAGTTAGCTGTTGACCT
AAAGGGTCGGATTAAATTGGAAGATGCAGGATTTGACTGGAAAATTCTGGGACCAGATGT
TCAAGAGGTGGACTATGTTGCATGGGTCTGTGATCAAGATGCATATGCATGCAGTGGACA
AAAGTGCTCTGCGCAGTCAATAGTATTCATGCATGAGAACTGGTTTAAAAGTTCACTTAT
TTCCAGAATGAAAGATCTTGCTGCAAGAAGGAAGTTAGAAGATCTAACTATTGGACCTGT
TCTGAGTTTTACAACTGAAGCAATGCTAGAACATATGAATAAGTTGCTTCAGATACCAGG
ATCAGAGCTACTATTTGGTGGCAAGGCTTTAGAAAATCATTCGATCCCTCCAATTTACGG
TGCTCTAAAACCAACAGCCATTTATATTCCGCTTGAAGAAATGCTGAAGGATGGCAATTA
TGAGCTTGTTACAAGAGAGATTTTTGGACCATTCCAGGTTGTAACTGACTATAAAGACAA
TCAGCTACCCAGGGTGTTGGAAGCACTTGAGAGGATGCATGCACATTTAACTGCTGCGGT
GGTTTCTAATGATTCCCTGTTTTTGCAGGAAGTGATTGGGAAATCAGTGAACGGGACTAC
TTATGCTGGACTAAGGGCAAGAACAACAGGAGCTCCACAGAATCACTGGTTTGGACCAGC
AGGGGACCCAAGAGGGGCAGGAATTGGGACGCCAGAAGCAATAAAGCTTGTTTGGTCGTG
TCATAGAGAAATCATATATGATATTGGTCCCCTGCCAAGTCACTGGGAAATTCCACCAGC
TACCTGAAGATTGACAATTGACATCAAGGGAAGGGGCCTATATGGCTAATCTCAAATATA
AAATGCAAACATCTGGCATAGTGCGAGAGGACAATTTAATAATAGCATGTCGATGCTTGT
CGTTTTCTGTGGTCTATCGGTATTAACAATTTTATGCAACCACTAAGTGATAAAAAGTAA
TGCAACCAAAAGATGATGTAAAATAAAGCGAGCAAAAGATGTGTTTACTTTCAACAGTGG
CATCTGGATGATCACCAGCGGCATTTGTCTTTTCGGGGCGGCAAGAGACAAAACTT