Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g05750.t01
CDS Infomation

cds chromosome:12X:17:6218457:6227902:-1 gene:VIT_17s0000g05750 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAGCAGCAGCAGCTGGGCGGTTCATGGATCTAGATTTAAGGAAGGGCCACCTCGGA
AGCTCACCGCACCCTACCAGCCACTCGCTTCATGTATTCCATCAAAGGTATGAGTCGTGT
TCACTGTCGATGAATGGTTGCCAAGGAGACCCCAAAATTCCCATTGGAACCATCCAGACT
CGGACGTTTCCAGGCGTTTCAACGCACTCACTCGCCCTCGACACCCTCAGCTCCGCCATC
TCCCACTTGAAATCCGACCCACCTCCCTTCACCTCCGGGATTCTACGTCTCCAGGTCCCA
ATTCAACAGAAAATTGAAGCAATTGATTGGCTCCACGCTCAACAAGAGCTTCTTCCCCGC
TGTTTCTTCTCCAGTAGAAGCCAAAGTAGCAGTTTTGATCCATTCATAGACTCCGTCAAC
GGAGATGGCAACGGTTTAGAGGACCACGATTTGGTTAGGGTCGCCGGCATCGGCGCTGCA
GTGTTCTTCCGACATATTCATCCATTCTCATTGGACGATTGGAAGTCCATAAAGAGGTTT
CTTTCCAAGAAATGCCCTTTAATTCGTGCATACGGGGCTATTCGGTTTGATCCAAGAGCT
AATGTATCATCTGAATGGAGGGCTTTTGGTTCATTCTACTTTGTGGTTCCTCAGGTGGAG
TTTAATGAGCTTGAAGGAAGTTCAGTTCTTGCTACAACTATTGCATGGGATAATGCCCTT
TCATGGACATGGGAAAAGGCAATTGGTGCACTTCAAGCTACAATGTGCCAGGTTTCTTCT
ATTGTTGGGAAGTTGAGGAAAGAAGTTTGTAAAACATTTGTCCTCAGCAATAGTCATGTT
CCTAGTAAGGCATCTTGGAATCTTGCTGTTAATAGAGCTTTGCAGATAATTGGCAGAGCT
GACTCACCCCTCATTAAGGTGGTACTTGCACGTAGCAGCAGGGTTGTGACTACTTCTCAT
ATTGACCCTATAGCATGGTTGGCTTGTTTACAGGTTGAGGGACAAAATGCTTACCAGTTC
TTTCTTCAGCCACCTGATGCACCAGCATTTATTGGGAACACTCCAGAGCAACTATTTCAC
CGAAAACGGCTTTGCATCCACAGTGAGGCTTTGGCTGGAACCCGTGCTAGAGGTGGATCA
AAGGCTCAGGATCTTCAAATAGAACTTGATTTACTTTCAAGTCCCAAGGAAGACTTTGAG
TTTTCTATTGTACGAGAGAGCATACAAAGAAAGCTGGAGGCCATATGCAGCACGGTGTGG
GTTGAACCAAAGAAAGCAATTCGAAAACTCCCCAGAATTCAACATCTATATGCCCAATTG
TCAGGACGATTGAGAAGTGAAGATGATGAGTTTGACATCTTGTCTTCTCTTCACCCAACT
CCAGCAGTTTGTGGGTTTCCTAGAGAAGAAGCACGGCTTTTAATCGCTGAAACTGAAATG
TTTGACCGAGGAATGTTTGCCGGTCCAGTTGGATGGTTTGGTGGAGGAGAGACTGAGTTT
GCAGTTGGGATCAGGTCAGCCTTAGTGGAGAAGGGTCTTGGTGGATTAATCTATGCTGGA
ACTGGGATAGTTAGAGGAAGCAATTCATCTTTAGAGTGGGAGGAGCTGGAGCTCAAGATA
TCTCAGTTCACCAAACCAATAAAAGTTGAGGTGCCTCTCTCCTGA

Peptide Sequence

PEP ID

VIT_17s0000g05750.t01
PEP Infomation

pep chromosome:12X:17:6218457:6227902:-1 gene:VIT_17s0000g05750 transcript:VIT_17s0000g05750.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAAAAAGRFMDLDLRKGHLGSSPHPTSHSLHVFHQRYESCSLSMNGCQGDPKIPIGTIQT
RTFPGVSTHSLALDTLSSAISHLKSDPPPFTSGILRLQVPIQQKIEAIDWLHAQQELLPR
CFFSSRSQSSSFDPFIDSVNGDGNGLEDHDLVRVAGIGAAVFFRHIHPFSLDDWKSIKRF
LSKKCPLIRAYGAIRFDPRANVSSEWRAFGSFYFVVPQVEFNELEGSSVLATTIAWDNAL
SWTWEKAIGALQATMCQVSSIVGKLRKEVCKTFVLSNSHVPSKASWNLAVNRALQIIGRA
DSPLIKVVLARSSRVVTTSHIDPIAWLACLQVEGQNAYQFFLQPPDAPAFIGNTPEQLFH
RKRLCIHSEALAGTRARGGSKAQDLQIELDLLSSPKEDFEFSIVRESIQRKLEAICSTVW
VEPKKAIRKLPRIQHLYAQLSGRLRSEDDEFDILSSLHPTPAVCGFPREEARLLIAETEM
FDRGMFAGPVGWFGGGETEFAVGIRSALVEKGLGGLIYAGTGIVRGSNSSLEWEELELKI
SQFTKPIKVEVPLS

Transcript Sequence

Transcript ID

VIT_17s0000g05750.t01
Transcript Infomation

cdna chromosome:12X:17:6218457:6227902:-1 gene:VIT_17s0000g05750 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TAAGTTCTATTGTTTATAAATTATAATGATCGTAAAGGAAGGAATTGGGAATCTATATAA
GATGAGTTGACAGCAAGCCTGGGAAGAAGCGGATACCCAAAAATAGTCATCATGGCAGCA
GCAGCAGCTGGGCGGTTCATGGATCTAGATTTAAGGAAGGGCCACCTCGGAAGCTCACCG
CACCCTACCAGCCACTCGCTTCATGTATTCCATCAAAGGTATGAGTCGTGTTCACTGTCG
ATGAATGGTTGCCAAGGAGACCCCAAAATTCCCATTGGAACCATCCAGACTCGGACGTTT
CCAGGCGTTTCAACGCACTCACTCGCCCTCGACACCCTCAGCTCCGCCATCTCCCACTTG
AAATCCGACCCACCTCCCTTCACCTCCGGGATTCTACGTCTCCAGGTCCCAATTCAACAG
AAAATTGAAGCAATTGATTGGCTCCACGCTCAACAAGAGCTTCTTCCCCGCTGTTTCTTC
TCCAGTAGAAGCCAAAGTAGCAGTTTTGATCCATTCATAGACTCCGTCAACGGAGATGGC
AACGGTTTAGAGGACCACGATTTGGTTAGGGTCGCCGGCATCGGCGCTGCAGTGTTCTTC
CGACATATTCATCCATTCTCATTGGACGATTGGAAGTCCATAAAGAGGTTTCTTTCCAAG
AAATGCCCTTTAATTCGTGCATACGGGGCTATTCGGTTTGATCCAAGAGCTAATGTATCA
TCTGAATGGAGGGCTTTTGGTTCATTCTACTTTGTGGTTCCTCAGGTGGAGTTTAATGAG
CTTGAAGGAAGTTCAGTTCTTGCTACAACTATTGCATGGGATAATGCCCTTTCATGGACA
TGGGAAAAGGCAATTGGTGCACTTCAAGCTACAATGTGCCAGGTTTCTTCTATTGTTGGG
AAGTTGAGGAAAGAAGTTTGTAAAACATTTGTCCTCAGCAATAGTCATGTTCCTAGTAAG
GCATCTTGGAATCTTGCTGTTAATAGAGCTTTGCAGATAATTGGCAGAGCTGACTCACCC
CTCATTAAGGTGGTACTTGCACGTAGCAGCAGGGTTGTGACTACTTCTCATATTGACCCT
ATAGCATGGTTGGCTTGTTTACAGGTTGAGGGACAAAATGCTTACCAGTTCTTTCTTCAG
CCACCTGATGCACCAGCATTTATTGGGAACACTCCAGAGCAACTATTTCACCGAAAACGG
CTTTGCATCCACAGTGAGGCTTTGGCTGGAACCCGTGCTAGAGGTGGATCAAAGGCTCAG
GATCTTCAAATAGAACTTGATTTACTTTCAAGTCCCAAGGAAGACTTTGAGTTTTCTATT
GTACGAGAGAGCATACAAAGAAAGCTGGAGGCCATATGCAGCACGGTGTGGGTTGAACCA
AAGAAAGCAATTCGAAAACTCCCCAGAATTCAACATCTATATGCCCAATTGTCAGGACGA
TTGAGAAGTGAAGATGATGAGTTTGACATCTTGTCTTCTCTTCACCCAACTCCAGCAGTT
TGTGGGTTTCCTAGAGAAGAAGCACGGCTTTTAATCGCTGAAACTGAAATGTTTGACCGA
GGAATGTTTGCCGGTCCAGTTGGATGGTTTGGTGGAGGAGAGACTGAGTTTGCAGTTGGG
ATCAGGTCAGCCTTAGTGGAGAAGGGTCTTGGTGGATTAATCTATGCTGGAACTGGGATA
GTTAGAGGAAGCAATTCATCTTTAGAGTGGGAGGAGCTGGAGCTCAAGATATCTCAGTTC
ACCAAACCAATAAAAGTTGAGGTGCCTCTCTCCTGATACAAGGACGTGATAACACAGGCA
GAATCACCTAAAAGATATCCTGAAGAGATGACATTGGGATTTTATCGAAGGGAAGATCAT
TTCAGCCAATTGTTTCATATCTCATGTTCTGGTTGCCTGGTTTCAATTTGAACTGTTCTT
ATGAGAAGAAAGAGTTTCAAGACAGTCTGTTTGTAGCTTTGGATGGAGTTATTAAACTGC
CAGTTTTTTGTCTTTGGCTGGTTTCCACTGTCTCCATT