Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_17s0000g05740.t01
CDS Infomation	cds chromosome:12X:17:6216007:6217587:1 gene:VIT_17s0000g05740 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:F6GTA3]
Sequence	ATGAGATTAGTAATTTTAATACCATTTTTGGTTATAGTTCCAGCCGTGACTGCCAACATA GGCGACTTCGATGAGGTGTGGCAAACTCGAGCGGAGGAAGCCAGAAAGGCCGCCCTCCAG GCCTATAACCCCCATCCAGAGAAAGTGACAGATAATTTCAACAAGAAGGTCCACAAGAGC TTTGATAGTACAAACCACACAAGGAGGAATTTGAGTAAATTTTCAGGACTATGCATGGCT ACCAACCCAATCGACAGGTGCTGGAGATGCCGAAGTGACTGGGCTAGCAACCGCATGAAA CTAGCTGATTGTGTGCTTGGGTTTGGGCAGAAGACAACTGGAGGCAAAGGTGGCAAAATT TATGTGGTGACGGATCCGTCTGACAATGACATGGTGAACCCCAAGCCCGGGACTTTACGT CATGCCGCGATCCAGGAGGAGCCACTTTGGATCATATTTGCCCATAGCATGGCAATCAGG CTAAATGAGGAGCTGATCATGACCAGTAATAAAACCATTGATGCCCGTGGAGCCAATGTG CACATTGCCAATGGTGCTGGCTTGACTCTGCAGTTTGTGCATAATATCATCATCCATGGC CTCCACATTCATGATATTAAGGTCGGCAATGGTGGCCTGATCCGGGACTCGGCCAGCCAC TATGGCTTCCGCACAAGAAGCGATGGGGATGGTATATCGATTTTCGGGGCCACAAATATT TGGATTGATCATATTTCCATGTCGAATTGTGCTGATGGACTAATAGATGCCATCATGGCA TCAACTGCTATTACCATCTCCAACTGCCATTTCACTCACCATAATGAGGTCATGTTGTTT GGTGCAAGCGACGGTTACTCCGGTGATGCAATCATGCAAATAACAATTACTTTCAACCAC TTCGGCCAGGGGTTGACACAAAGGATGCCAAGATGCCGGTGGGGATTCTTCCATGTTGTC AACAATGACTACACACATTGGCTGATGTACGCCATAGGGGGTAGCCACCATCCTACCATA CTCAGCCAGGGTAACCGATTCATCGCTCCTCCTGACATTAACTGTAAAGAGGTGACAAAG AGGGATTACTCACCTGAGAGTGTGTGGAAGAGTTGGACGTGGAGATCACAGGGGGATCTG ATGATGAATGGGGCCTTCTTCGTTGAATCTGGAGACCCTAATTTTGATTTCTCAAACAAA TATGTGATCAGGGCAAAACCTGGGGCATTTGTCACCAGGCTAACACGCTTTTCGGGTGCT CTTAGCTGCAGAGAAGGGATGCCATGTTAG

Peptide Sequence

PEP ID	VIT_17s0000g05740.t01
PEP Infomation	pep chromosome:12X:17:6216007:6217587:1 gene:VIT_17s0000g05740 transcript:VIT_17s0000g05740.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:F6GTA3]
Sequence	MRLVILIPFLVIVPAVTANIGDFDEVWQTRAEEARKAALQAYNPHPEKVTDNFNKKVHKS FDSTNHTRRNLSKFSGLCMATNPIDRCWRCRSDWASNRMKLADCVLGFGQKTTGGKGGKI YVVTDPSDNDMVNPKPGTLRHAAIQEEPLWIIFAHSMAIRLNEELIMTSNKTIDARGANV HIANGAGLTLQFVHNIIIHGLHIHDIKVGNGGLIRDSASHYGFRTRSDGDGISIFGATNI WIDHISMSNCADGLIDAIMASTAITISNCHFTHHNEVMLFGASDGYSGDAIMQITITFNH FGQGLTQRMPRCRWGFFHVVNNDYTHWLMYAIGGSHHPTILSQGNRFIAPPDINCKEVTK RDYSPESVWKSWTWRSQGDLMMNGAFFVESGDPNFDFSNKYVIRAKPGAFVTRLTRFSGA LSCREGMPC

Transcript Sequence

Transcript ID	VIT_17s0000g05740.t01
Transcript Infomation	cdna chromosome:12X:17:6216007:6217587:1 gene:VIT_17s0000g05740 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:F6GTA3]
Sequence	ATGAGATTAGTAATTTTAATACCATTTTTGGTTATAGTTCCAGCCGTGACTGCCAACATA GGCGACTTCGATGAGGTGTGGCAAACTCGAGCGGAGGAAGCCAGAAAGGCCGCCCTCCAG GCCTATAACCCCCATCCAGAGAAAGTGACAGATAATTTCAACAAGAAGGTCCACAAGAGC TTTGATAGTACAAACCACACAAGGAGGAATTTGAGTAAATTTTCAGGACTATGCATGGCT ACCAACCCAATCGACAGGTGCTGGAGATGCCGAAGTGACTGGGCTAGCAACCGCATGAAA CTAGCTGATTGTGTGCTTGGGTTTGGGCAGAAGACAACTGGAGGCAAAGGTGGCAAAATT TATGTGGTGACGGATCCGTCTGACAATGACATGGTGAACCCCAAGCCCGGGACTTTACGT CATGCCGCGATCCAGGAGGAGCCACTTTGGATCATATTTGCCCATAGCATGGCAATCAGG CTAAATGAGGAGCTGATCATGACCAGTAATAAAACCATTGATGCCCGTGGAGCCAATGTG CACATTGCCAATGGTGCTGGCTTGACTCTGCAGTTTGTGCATAATATCATCATCCATGGC CTCCACATTCATGATATTAAGGTCGGCAATGGTGGCCTGATCCGGGACTCGGCCAGCCAC TATGGCTTCCGCACAAGAAGCGATGGGGATGGTATATCGATTTTCGGGGCCACAAATATT TGGATTGATCATATTTCCATGTCGAATTGTGCTGATGGACTAATAGATGCCATCATGGCA TCAACTGCTATTACCATCTCCAACTGCCATTTCACTCACCATAATGAGGTCATGTTGTTT GGTGCAAGCGACGGTTACTCCGGTGATGCAATCATGCAAATAACAATTACTTTCAACCAC TTCGGCCAGGGGTTGACACAAAGGATGCCAAGATGCCGGTGGGGATTCTTCCATGTTGTC AACAATGACTACACACATTGGCTGATGTACGCCATAGGGGGTAGCCACCATCCTACCATA CTCAGCCAGGGTAACCGATTCATCGCTCCTCCTGACATTAACTGTAAAGAGGTGACAAAG AGGGATTACTCACCTGAGAGTGTGTGGAAGAGTTGGACGTGGAGATCACAGGGGGATCTG ATGATGAATGGGGCCTTCTTCGTTGAATCTGGAGACCCTAATTTTGATTTCTCAAACAAA TATGTGATCAGGGCAAAACCTGGGGCATTTGTCACCAGGCTAACACGCTTTTCGGGTGCT CTTAGCTGCAGAGAAGGGATGCCATGTTAG