Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g05600.t01
CDS Infomation

cds chromosome:12X:17:6124001:6125145:1 gene:VIT_17s0000g05600 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACAGACCCTACACCTTTTAACAAGAAGCTACAAGGTAAAGTGGCTATCATCACCGGC
GGCGCAAGCGGCATCGGCGAGGCTACGGCACGTCTCTTCGCCGATCACGGCGCACGAGCC
GTCGTTGTAGCCGACATCCAAGACGAGCTGGGCCGTGGCGTCGCCGAGTCAATCGGCTTA
CACCGCTGCAGGTACATTCACTGTGATGTAACCGATGAGCAGCAGATCAAAGCGATGGTG
GAATCGACGGTGAAGATGTTCGGACAACTCGACATCATGTTCAGCAACGCTGGGGTTATG
AGTATGGGCGACCAGACCATACTGGAGCTGGATCTATCAGCTTCCGACAAGGTGTTTGCA
GTAAACGCACGCGGCATGGCGGCGTGTGTGAAGCACGCGGCGCGTGCGATGGTGGAGGGT
GGTGTTAAAGGGAGCATAGTGTGCACGGCGAGCGTGGCTGCGACGGTGGGGAATGACAAG
TTCACTGACTACATAATGTCGAAGCACGCGGTGTTGGGGCTAGTGAGATCGGCGAGTAAG
CAGCTGGGCGCGTACGGAATAAGGGTGAATTGCGTGTCACCGACGGCAGTGGCGACGCCA
ATGCTTTGCAGCGCATTTAAGATGGGCGTGGAGGAGGCGGAGAAATTTTTTGTAGAGGAC
ATGGATTTAAAAGGGAGAGGGGCAGTGCAAGTGAGACACGTGGGGGATGCAGCGTTGTTT
CTTGCTTCCGACGATTCTGAGTTTATAACGGGACATAACTTGGCCATCGACGGGGGCTTC
CGCCGGTGA

Peptide Sequence

PEP ID

VIT_17s0000g05600.t01
PEP Infomation

pep chromosome:12X:17:6124001:6125145:1 gene:VIT_17s0000g05600 transcript:VIT_17s0000g05600.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTDPTPFNKKLQGKVAIITGGASGIGEATARLFADHGARAVVVADIQDELGRGVAESIGL
HRCRYIHCDVTDEQQIKAMVESTVKMFGQLDIMFSNAGVMSMGDQTILELDLSASDKVFA
VNARGMAACVKHAARAMVEGGVKGSIVCTASVAATVGNDKFTDYIMSKHAVLGLVRSASK
QLGAYGIRVNCVSPTAVATPMLCSAFKMGVEEAEKFFVEDMDLKGRGAVQVRHVGDAALF
LASDDSEFITGHNLAIDGGFRR

Transcript Sequence

Transcript ID

VIT_17s0000g05600.t01
Transcript Infomation

cdna chromosome:12X:17:6124001:6125145:1 gene:VIT_17s0000g05600 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAAAGGAGTGGCAATATGAAATGTTCATAAAAAAGTGGACACAAGGAAACCATAGTTTTC
CCTATAAATCATTCTGAGTAATCCTATACCCTCACCTCAACCTTGCTGCCAGCCTGCCGC
TGCTCTCTAATCTCAGGAGCCATCTTCATAGTTCATACTTCATACTCTCAGCCTCACCAA
AATTCCATGACAGACCCTACACCTTTTAACAAGAAGCTACAAGGTAAAGTGGCTATCATC
ACCGGCGGCGCAAGCGGCATCGGCGAGGCTACGGCACGTCTCTTCGCCGATCACGGCGCA
CGAGCCGTCGTTGTAGCCGACATCCAAGACGAGCTGGGCCGTGGCGTCGCCGAGTCAATC
GGCTTACACCGCTGCAGGTACATTCACTGTGATGTAACCGATGAGCAGCAGATCAAAGCG
ATGGTGGAATCGACGGTGAAGATGTTCGGACAACTCGACATCATGTTCAGCAACGCTGGG
GTTATGAGTATGGGCGACCAGACCATACTGGAGCTGGATCTATCAGCTTCCGACAAGGTG
TTTGCAGTAAACGCACGCGGCATGGCGGCGTGTGTGAAGCACGCGGCGCGTGCGATGGTG
GAGGGTGGTGTTAAAGGGAGCATAGTGTGCACGGCGAGCGTGGCTGCGACGGTGGGGAAT
GACAAGTTCACTGACTACATAATGTCGAAGCACGCGGTGTTGGGGCTAGTGAGATCGGCG
AGTAAGCAGCTGGGCGCGTACGGAATAAGGGTGAATTGCGTGTCACCGACGGCAGTGGCG
ACGCCAATGCTTTGCAGCGCATTTAAGATGGGCGTGGAGGAGGCGGAGAAATTTTTTGTA
GAGGACATGGATTTAAAAGGGAGAGGGGCAGTGCAAGTGAGACACGTGGGGGATGCAGCG
TTGTTTCTTGCTTCCGACGATTCTGAGTTTATAACGGGACATAACTTGGCCATCGACGGG
GGCTTCCGCCGGTGAGTATGTTACATTTCAGGAAGGGAAGCGAAAAAGCTATTTTCCTTT
TCCTTTTTGTTATTTTCAATAAGTTATTTCACATGAAATGTCAGTATCATGTTGGCCAAC
CCATCTCCCTTTCTAACTTTTAAGTTTTAAGTTGTAACACAATCCATGGCTATATGTTCT
TCTTG