Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g05570.t01
CDS Infomation

cds chromosome:12X:17:6076049:6081359:1 gene:VIT_17s0000g05570 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGTTGTGGATTTGGTTTTTCTCTGCAATATTGGGAGGAACCCTTTTGGGCCCTTGC
TGTCTTGCTCTCTCTGAAGATGGTGTTACATTGTTGGAAATCAAGAGCCGTTTGAATGAC
AGTAGAAATTTTCTCGGTAACTGGAGGGATTCTGATGAGTTTCCATGTAAATGGACTGGT
GTCTCTTGCTATCACCATGATCATCGAGTTCGTTCTATAAACCTACCTTACATGCAACTC
GGGGGGATTATATCTCCAAGCATAGGCAAACTCAATAAATTACAAAGACTGGCACTTCAC
CAAAACAGCTTGCATGGGTCTATTCCTAACGAGATTGCCAATTGTGCTGAGCTCAGAGCC
CTGTACTTGAGGGCCAATTATCTTCAAGGAGGCATACCGTCAGACCTTGGAAATCTTTCA
TATCTCACTATACTGGATTTCTCAAGCAATTCATTAAAGGGTGCCATACCATCCTCACTG
GGTCGCCTCAAACGGCTGCGCTATTTGAACTTGTCTACAAACTTCCTTTCTGGTGAAATC
CCAGATGTTGGAGTCCTAAGCACTTTTGACAACAAGTCTTTTATTGGAAATTTGGATTTG
TGTGGTCAACAAGTGCACAAGCCATGTCGGACCTCACTGGGATTCCCTGCAGTGCTGCCC
CATGCTGAAAGTGATGAAGCTGCAGTCCCTGTTAAACGATCAGCTCATTTCACCAAAGGT
GTGTTGATTGGTGCAATGTCTACTATGGCTCTTGTGCTTGTCATGCTTCTTGCATTCCTC
TGGATTTGTTTCTTATCAAAGAAAGAAAGAGCTTCCAGGAAATATACCGAAGTTAAAAAG
CAAGTTCATCAAGAACCAAGCACCAAGCTTATTACTTTCCATGGTGATCTTCCATATCCC
TCGTGTGAGATCATAGAGAAGCTGGAAGCTCTTGATGAAGAGGATGTTGTGGGTTCAGGG
GGATTTGGTACTGTATATCGAATGGTCATGAATGACTGTGGTACATTTGCTGTGAAAAGA
ATTGATCGGAGTCGTGAAGGATCTGATAAAGTATTTGAGAGGGAGTTGGAGATCTTGGGT
AGCATAAAGCACATAAATCTAGTTAACCTGCGAGGTTACTGCAGGCTTCCCACTTCAAAG
CTGCTTATATATGATTATTTGGCTTTGGGCAGCTTAGATGATTTTTTGCATGAACATGGT
GGACAAGATGAGCGGTCCCTTAATTGGAGTGCTCGTTTAAACATAGCCCTGGGTTCTGCC
CGGGGGTTGGCATATTTGCATCATGATTGCAGCCCAAGGATAGTTCATCGTGACATAAAA
TCCAGCAACATACTCCTTGATGAAAATTTAGAGCCTCACGTTTCTGACTTTGGTCTTGCC
AAACTTTTGGTAGATGAGGATGCGCATATCACGACTGTCGTTGCTGGCACTTTTGGCTAT
TTGGCACCAGAGTATCTGCAAAGTGGAAGAGCAACAGAGAAATCAGATGTCTATAGCTTT
GGAGTTCTTTTGTTAGAGCTTGTCACTGGAAAGAGGCCTACTGATCCAACTTTCGTCAAG
AGAGGTTTAAATGTTGTTGGCTGGATGAACACCCTATTGAAAGAGAATCGGTTGGAGGAT
GTAGTAGATAAAAGGTGCAGAGACGCTGAAGTTGAAACTGTAGAAGCAATTCTTGATATA
GCGGGAAGGTGCACCGATGCAAACCCAGACGATCGGCCATCAATGAGCCAGGTGTTGCAG
CTGCTAGAGCAAGAAGTTATGTCACCATGCCCCAGTGATTTCTATGAGTCCCATTCAGAC
TACTGTTAA

Peptide Sequence

PEP ID

VIT_17s0000g05570.t01
PEP Infomation

pep chromosome:12X:17:6076049:6081359:1 gene:VIT_17s0000g05570 transcript:VIT_17s0000g05570.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGLWIWFFSAILGGTLLGPCCLALSEDGVTLLEIKSRLNDSRNFLGNWRDSDEFPCKWTG
VSCYHHDHRVRSINLPYMQLGGIISPSIGKLNKLQRLALHQNSLHGSIPNEIANCAELRA
LYLRANYLQGGIPSDLGNLSYLTILDFSSNSLKGAIPSSLGRLKRLRYLNLSTNFLSGEI
PDVGVLSTFDNKSFIGNLDLCGQQVHKPCRTSLGFPAVLPHAESDEAAVPVKRSAHFTKG
VLIGAMSTMALVLVMLLAFLWICFLSKKERASRKYTEVKKQVHQEPSTKLITFHGDLPYP
SCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDKVFERELEILG
SIKHINLVNLRGYCRLPTSKLLIYDYLALGSLDDFLHEHGGQDERSLNWSARLNIALGSA
RGLAYLHHDCSPRIVHRDIKSSNILLDENLEPHVSDFGLAKLLVDEDAHITTVVAGTFGY
LAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLED
VVDKRCRDAEVETVEAILDIAGRCTDANPDDRPSMSQVLQLLEQEVMSPCPSDFYESHSD
YC

Transcript Sequence

Transcript ID

VIT_17s0000g05570.t01
Transcript Infomation

cdna chromosome:12X:17:6076049:6081359:1 gene:VIT_17s0000g05570 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCTTTATCTCCACCGTAAGAACCTGAACTGGCTGTACAGTGACTGAATGTGCTCTAAAGG
GAACTCCAGCCAGGAACCCCCTCTTCATCAAAGGATGAAAATGGGGTTGTGGATTTGGTT
TTTCTCTGCAATATTGGGAGGAACCCTTTTGGGCCCTTGCTGTCTTGCTCTCTCTGAAGA
TGGTGTTACATTGTTGGAAATCAAGAGCCGTTTGAATGACAGTAGAAATTTTCTCGGTAA
CTGGAGGGATTCTGATGAGTTTCCATGTAAATGGACTGGTGTCTCTTGCTATCACCATGA
TCATCGAGTTCGTTCTATAAACCTACCTTACATGCAACTCGGGGGGATTATATCTCCAAG
CATAGGCAAACTCAATAAATTACAAAGACTGGCACTTCACCAAAACAGCTTGCATGGGTC
TATTCCTAACGAGATTGCCAATTGTGCTGAGCTCAGAGCCCTGTACTTGAGGGCCAATTA
TCTTCAAGGAGGCATACCGTCAGACCTTGGAAATCTTTCATATCTCACTATACTGGATTT
CTCAAGCAATTCATTAAAGGGTGCCATACCATCCTCACTGGGTCGCCTCAAACGGCTGCG
CTATTTGAACTTGTCTACAAACTTCCTTTCTGGTGAAATCCCAGATGTTGGAGTCCTAAG
CACTTTTGACAACAAGTCTTTTATTGGAAATTTGGATTTGTGTGGTCAACAAGTGCACAA
GCCATGTCGGACCTCACTGGGATTCCCTGCAGTGCTGCCCCATGCTGAAAGTGATGAAGC
TGCAGTCCCTGTTAAACGATCAGCTCATTTCACCAAAGGTGTGTTGATTGGTGCAATGTC
TACTATGGCTCTTGTGCTTGTCATGCTTCTTGCATTCCTCTGGATTTGTTTCTTATCAAA
GAAAGAAAGAGCTTCCAGGAAATATACCGAAGTTAAAAAGCAAGTTCATCAAGAACCAAG
CACCAAGCTTATTACTTTCCATGGTGATCTTCCATATCCCTCGTGTGAGATCATAGAGAA
GCTGGAAGCTCTTGATGAAGAGGATGTTGTGGGTTCAGGGGGATTTGGTACTGTATATCG
AATGGTCATGAATGACTGTGGTACATTTGCTGTGAAAAGAATTGATCGGAGTCGTGAAGG
ATCTGATAAAGTATTTGAGAGGGAGTTGGAGATCTTGGGTAGCATAAAGCACATAAATCT
AGTTAACCTGCGAGGTTACTGCAGGCTTCCCACTTCAAAGCTGCTTATATATGATTATTT
GGCTTTGGGCAGCTTAGATGATTTTTTGCATGAACATGGTGGACAAGATGAGCGGTCCCT
TAATTGGAGTGCTCGTTTAAACATAGCCCTGGGTTCTGCCCGGGGGTTGGCATATTTGCA
TCATGATTGCAGCCCAAGGATAGTTCATCGTGACATAAAATCCAGCAACATACTCCTTGA
TGAAAATTTAGAGCCTCACGTTTCTGACTTTGGTCTTGCCAAACTTTTGGTAGATGAGGA
TGCGCATATCACGACTGTCGTTGCTGGCACTTTTGGCTATTTGGCACCAGAGTATCTGCA
AAGTGGAAGAGCAACAGAGAAATCAGATGTCTATAGCTTTGGAGTTCTTTTGTTAGAGCT
TGTCACTGGAAAGAGGCCTACTGATCCAACTTTCGTCAAGAGAGGTTTAAATGTTGTTGG
CTGGATGAACACCCTATTGAAAGAGAATCGGTTGGAGGATGTAGTAGATAAAAGGTGCAG
AGACGCTGAAGTTGAAACTGTAGAAGCAATTCTTGATATAGCGGGAAGGTGCACCGATGC
AAACCCAGACGATCGGCCATCAATGAGCCAGGTGTTGCAGCTGCTAGAGCAAGAAGTTAT
GTCACCATGCCCCAGTGATTTCTATGAGTCCCATTCAGACTACTGTTAAAAATGATAGAC
AAACCATATGTATGCATTGTGGCAGATGTGTTGTTGCT