Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g05510.t01
CDS Infomation

cds chromosome:12X:17:6000517:6005645:-1 gene:VIT_17s0000g05510 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTGATGTTCTTTTCTTATTATTTTGAAGGGGTGGAATTGGGTAAGGTATTACTCTAT
TTGCAGATTATGTTGCGAACAAAGCAGATTGGTCCCCTTTCCAACTCTGCTAGGTCCATT
TTAATTAGTGGAACACGATCCAGTACACCAGATGGAAACTCATGCCCTTGCTCTGAAGAT
GAAACTTGTGTTTCAACAAAGCAGCATGCAAGAAATGAAGTTTTGATCATGCAGAAGCAA
ACCACCTTGGCATCCAAAACTGCAGCAAGAGTTGGACCCCTGTTTTTGGGTGATGCAGTA
AAAGTAGTGGGTTCTCAAAAAGTTGAGAGTGTTGAGCATGCAACTTCTCTAGCACAAGTT
GTAGCTGCTCCTAGATCTGTGGTGGGATCAGATTGTGTTAGTTATGTCAGTGACAATGTT
GGTGTTAATAATGATGCGGTGCATGCGCCTCCTATCTCAGATCAGTTTATTAGGGCAGGT
ATTGTAGCAGTAAATTTTCTGTCTGATTTAGTAAATTATAAGATTCCTATGTCAGATGGG
AGTGGAATGCTTAAGCTGCCACAGAACTGTATGGTTGACCCCACCAAGCCTCTTTCTAAG
ATCAAATCAACAAATATAAAACCCATTAGAAAAGGGAAATTTTCAAAAGTTCGTGCAGAG
TCGTCTGCCAATATAGCAGCAGCCTCAAACTCTACAAGTAGTTATCACAGTACAAGAGGA
AAAGGTGATAAATCGGGCTCAGTTAAAGGTTGCAGTCATGTGGGAGATACCTGGACAAGG
AATACAGTAGATACTCGAAGTCTGTCTTCAGATACTCACAATAAGAGGTCTATGCCACAG
AAGTCAAAAGCTTATTCAAACTACTCAACATCGAATTCCAATTTCAATTCCAATGTTCGA
AATTCAGAACCGAGGTTTGTGGGAGGCATCGCAGGGGGGTTCAGCAAGCCCCTAAGAGAT
ACAAAAATGATAGGAATTGCTCCAGTGTCTAGGCAGTTTGGAAGCTCTGGGCATGTTGTG
GAAAATGTTTCTCGCATATTGCGACAGCTGAGTTGGGGACCTGCAGCAGAAGAGGCTCTT
AGAAATCTCAACTGTTTGATGGATGCATATCAAGCAAACCAGGTTCTAAAGCAGATTCAA
GACCATCCGGTTGCTCTTGGTTTCTTTTATTGGCTGAAAAGACAAACTGGGTTCAAGCAT
GATGGGCATACTTACACCACAATGGTTGGCATCCTGGGTCGTGCTAGACAATTTGGTGCG
ATTAACAAATTGCTGGCTGAGATGGTCAGGGATGGATGCCAGCCAAATGTGGTGACATAT
AATCGATTGATTCACAGTTATGGCCGGGCAAACTATTTGAATGAAGCAGTCAGCGTTTTT
GATAGGATGCAGGAAGCAGGATGTCAACCTGACCGTGTCACCTATTGCACACTCATCGAC
ATCCATGCGAAAGCAGGGTTTCTGGATGTTGCCTTGCACATGTATCAAAAGATGCAAGAG
GCTCACCTTTCTCCTGACACATTCACCTACAGTGTTATAATCAACTGCCTGGGAAAAGCT
GGCCATTTGACTTCTGCTCACAAGCTATTCTGCGAGATGGTTGATCAGGGCTGTGTTCCA
AACTTGGTTACTTACAATATTATGATTGCTTTGCAAGCCAAGGCAAGGAACTATCCAACT
GCATTAGAACTTTACCGTGACATGCAGAATGCAGGATTTCAACCCGACAAAGTAACTTAC
AGCATAGTAATGGAGGTGCTTGGCCATTGTGGGCATCTTGAGGAGGCAGAAGCAATTTTT
ACTGAGATGAAAAGGAAGAATTGGGTGCCAGATGAACCTGTTTATGGTCTTTTAGTAGAC
TTGTGGGGAAAGGTTGGGAATGTTGAGAAGTCTTGGGAGTGGTATCAAGCCATGCTCAAT
GCTGGGTTGTGCCCTAATGTGCCCACTTGCAATTCCCTGCTCAGTGCGTTCCTTAGGGTG
CATCGGCTTTCAGATGCATACAACTTGCTGCAGAGCATGTTGCGATTAGGTCTCCAGCCT
TCTTTGCAAACTTATACCTTGCTTCTCAGTTGTTGTACTGAAGCTCGGTCATCATTTGAC
ATGGGATTTTGTGGTGAGCTTATGGCAGTGACGGGTCACCCTGCACACATGTTCCTACTG
TCCATGCCAGCTGCAGGACCTGATGGACAGAATGTTCGAGATCATGTGAGCAAGTTCCTG
GATCTGATGCACAGCGAGGATAGGGAGAGTAAGAGGGGACTTGTTGATGCAGTCGTGGAT
TTTCTCCACAAGTCAGGGCTCAAGGAGGAGGCTGGTTCTGTGTGGGAAGTTGCTGCACAG
AAGAATGTCTATCCAGACGCGGTTAGAGAGAAAAGCTCATGTTATTGGCTCATCAATCTG
CACTTCATGTCAGATGGGACTGCTGTGACGGCACTCTCACGGACACTTGCCTGGTTCCAC
CGGGAGATGCTTGTATCTGGAACTGTTCCCAGCCGGATTGATATAGTGACAGGATGGGGT
CGGCGGAGCAGGGTGACAGGAGCTTCTCTGGTGAGGCAGGCAGTGCAAGAACTGCTGCAT
ATATTCAGCTTCCCCTTTTTCACTGAAAATGGCAACTCCGGTTGTTTTGTCGGACGAGGG
GAGCCCCTTGGCAGATGGCTACTCCAATCCTATGTCGAGCGCATGCATTTACTGTAG

Peptide Sequence

PEP ID

VIT_17s0000g05510.t01
PEP Infomation

pep chromosome:12X:17:6000517:6005645:-1 gene:VIT_17s0000g05510 transcript:VIT_17s0000g05510.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLMFFSYYFEGVELGKVLLYLQIMLRTKQIGPLSNSARSILISGTRSSTPDGNSCPCSED
ETCVSTKQHARNEVLIMQKQTTLASKTAARVGPLFLGDAVKVVGSQKVESVEHATSLAQV
VAAPRSVVGSDCVSYVSDNVGVNNDAVHAPPISDQFIRAGIVAVNFLSDLVNYKIPMSDG
SGMLKLPQNCMVDPTKPLSKIKSTNIKPIRKGKFSKVRAESSANIAAASNSTSSYHSTRG
KGDKSGSVKGCSHVGDTWTRNTVDTRSLSSDTHNKRSMPQKSKAYSNYSTSNSNFNSNVR
NSEPRFVGGIAGGFSKPLRDTKMIGIAPVSRQFGSSGHVVENVSRILRQLSWGPAAEEAL
RNLNCLMDAYQANQVLKQIQDHPVALGFFYWLKRQTGFKHDGHTYTTMVGILGRARQFGA
INKLLAEMVRDGCQPNVVTYNRLIHSYGRANYLNEAVSVFDRMQEAGCQPDRVTYCTLID
IHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVP
NLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIF
TEMKRKNWVPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPNVPTCNSLLSAFLRV
HRLSDAYNLLQSMLRLGLQPSLQTYTLLLSCCTEARSSFDMGFCGELMAVTGHPAHMFLL
SMPAAGPDGQNVRDHVSKFLDLMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQ
KNVYPDAVREKSSCYWLINLHFMSDGTAVTALSRTLAWFHREMLVSGTVPSRIDIVTGWG
RRSRVTGASLVRQAVQELLHIFSFPFFTENGNSGCFVGRGEPLGRWLLQSYVERMHLL

Transcript Sequence

Transcript ID

VIT_17s0000g05510.t01
Transcript Infomation

cdna chromosome:12X:17:6000517:6005645:-1 gene:VIT_17s0000g05510 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTGATGTTCTTTTCTTATTATTTTGAAGGGGTGGAATTGGGTAAGGTATTACTCTAT
TTGCAGATTATGTTGCGAACAAAGCAGATTGGTCCCCTTTCCAACTCTGCTAGGTCCATT
TTAATTAGTGGAACACGATCCAGTACACCAGATGGAAACTCATGCCCTTGCTCTGAAGAT
GAAACTTGTGTTTCAACAAAGCAGCATGCAAGAAATGAAGTTTTGATCATGCAGAAGCAA
ACCACCTTGGCATCCAAAACTGCAGCAAGAGTTGGACCCCTGTTTTTGGGTGATGCAGTA
AAAGTAGTGGGTTCTCAAAAAGTTGAGAGTGTTGAGCATGCAACTTCTCTAGCACAAGTT
GTAGCTGCTCCTAGATCTGTGGTGGGATCAGATTGTGTTAGTTATGTCAGTGACAATGTT
GGTGTTAATAATGATGCGGTGCATGCGCCTCCTATCTCAGATCAGTTTATTAGGGCAGGT
ATTGTAGCAGTAAATTTTCTGTCTGATTTAGTAAATTATAAGATTCCTATGTCAGATGGG
AGTGGAATGCTTAAGCTGCCACAGAACTGTATGGTTGACCCCACCAAGCCTCTTTCTAAG
ATCAAATCAACAAATATAAAACCCATTAGAAAAGGGAAATTTTCAAAAGTTCGTGCAGAG
TCGTCTGCCAATATAGCAGCAGCCTCAAACTCTACAAGTAGTTATCACAGTACAAGAGGA
AAAGGTGATAAATCGGGCTCAGTTAAAGGTTGCAGTCATGTGGGAGATACCTGGACAAGG
AATACAGTAGATACTCGAAGTCTGTCTTCAGATACTCACAATAAGAGGTCTATGCCACAG
AAGTCAAAAGCTTATTCAAACTACTCAACATCGAATTCCAATTTCAATTCCAATGTTCGA
AATTCAGAACCGAGGTTTGTGGGAGGCATCGCAGGGGGGTTCAGCAAGCCCCTAAGAGAT
ACAAAAATGATAGGAATTGCTCCAGTGTCTAGGCAGTTTGGAAGCTCTGGGCATGTTGTG
GAAAATGTTTCTCGCATATTGCGACAGCTGAGTTGGGGACCTGCAGCAGAAGAGGCTCTT
AGAAATCTCAACTGTTTGATGGATGCATATCAAGCAAACCAGGTTCTAAAGCAGATTCAA
GACCATCCGGTTGCTCTTGGTTTCTTTTATTGGCTGAAAAGACAAACTGGGTTCAAGCAT
GATGGGCATACTTACACCACAATGGTTGGCATCCTGGGTCGTGCTAGACAATTTGGTGCG
ATTAACAAATTGCTGGCTGAGATGGTCAGGGATGGATGCCAGCCAAATGTGGTGACATAT
AATCGATTGATTCACAGTTATGGCCGGGCAAACTATTTGAATGAAGCAGTCAGCGTTTTT
GATAGGATGCAGGAAGCAGGATGTCAACCTGACCGTGTCACCTATTGCACACTCATCGAC
ATCCATGCGAAAGCAGGGTTTCTGGATGTTGCCTTGCACATGTATCAAAAGATGCAAGAG
GCTCACCTTTCTCCTGACACATTCACCTACAGTGTTATAATCAACTGCCTGGGAAAAGCT
GGCCATTTGACTTCTGCTCACAAGCTATTCTGCGAGATGGTTGATCAGGGCTGTGTTCCA
AACTTGGTTACTTACAATATTATGATTGCTTTGCAAGCCAAGGCAAGGAACTATCCAACT
GCATTAGAACTTTACCGTGACATGCAGAATGCAGGATTTCAACCCGACAAAGTAACTTAC
AGCATAGTAATGGAGGTGCTTGGCCATTGTGGGCATCTTGAGGAGGCAGAAGCAATTTTT
ACTGAGATGAAAAGGAAGAATTGGGTGCCAGATGAACCTGTTTATGGTCTTTTAGTAGAC
TTGTGGGGAAAGGTTGGGAATGTTGAGAAGTCTTGGGAGTGGTATCAAGCCATGCTCAAT
GCTGGGTTGTGCCCTAATGTGCCCACTTGCAATTCCCTGCTCAGTGCGTTCCTTAGGGTG
CATCGGCTTTCAGATGCATACAACTTGCTGCAGAGCATGTTGCGATTAGGTCTCCAGCCT
TCTTTGCAAACTTATACCTTGCTTCTCAGTTGTTGTACTGAAGCTCGGTCATCATTTGAC
ATGGGATTTTGTGGTGAGCTTATGGCAGTGACGGGTCACCCTGCACACATGTTCCTACTG
TCCATGCCAGCTGCAGGACCTGATGGACAGAATGTTCGAGATCATGTGAGCAAGTTCCTG
GATCTGATGCACAGCGAGGATAGGGAGAGTAAGAGGGGACTTGTTGATGCAGTCGTGGAT
TTTCTCCACAAGTCAGGGCTCAAGGAGGAGGCTGGTTCTGTGTGGGAAGTTGCTGCACAG
AAGAATGTCTATCCAGACGCGGTTAGAGAGAAAAGCTCATGTTATTGGCTCATCAATCTG
CACTTCATGTCAGATGGGACTGCTGTGACGGCACTCTCACGGACACTTGCCTGGTTCCAC
CGGGAGATGCTTGTATCTGGAACTGTTCCCAGCCGGATTGATATAGTGACAGGATGGGGT
CGGCGGAGCAGGGTGACAGGAGCTTCTCTGGTGAGGCAGGCAGTGCAAGAACTGCTGCAT
ATATTCAGCTTCCCCTTTTTCACTGAAAATGGCAACTCCGGTTGTTTTGTCGGACGAGGG
GAGCCCCTTGGCAGATGGCTACTCCAATCCTATGTCGAGCGCATGCATTTACTGTAGAAG
GCAATGTTGTCGCACCACCATTGCAGTTTTGTTGTGAAAGAAAGAAGAGGAACTTTGGTT
GCCTCAGGCATTAGTTTGAACTCTTATGAAGCTGTTGTTATCTGCTATCTCAAAATTGTT
GTTATAAGTAACAGTTCCAGCCTTTCTACTCCTCAACCCTAACACACAGTTTTTCATTCA
TAAATTTACAACCCCATGT