Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g05490.t01
CDS Infomation

cds chromosome:12X:17:5986034:5987218:-1 gene:VIT_17s0000g05490 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACCCTTAAAGGTGGGACTAGCCAAGCATGCGCTGCCTGCAAGTACCAGAGGAGGAAG
TGCTCCTCTGAGTGTCCTCTTGCCCCTTACTTCCCTCCTGATCAGCCCAAAATGTTTGCC
GACGCTCACAGGCTCTTTGGTGTCAGCAACATCCTTAAAATTCTCAAGCAATTGGACCCC
ACCCAGAAACTCACCGCCATGCAGTCCATCATCTACCAGGCCACCATCCGTGAGCGCTAT
CCGGTTAGCGGCTGCTTGGGTTTGATTTGCCAACTCCATTACCAAATCCGCCAGACCGAG
GACGAGCTTCATGTTGTCCTTTCACAGCTTGAAATCTGCCGCCAGCACCACCACCAACAG
ATACAGATGGCCTCTGCACCCAGTGATTCCTCCTCTTCCCCCTTGGAGCTAGGCTGCAGT
GCCCTCTCTCTCCATCATAACCCTCCTCCTCCTCCTCCGGAATACAACGCTGTTTCTGTT
GCTGGCGGTGGTGATGGTGGTCTGCCTGTTGGAGTTGGAACCCATCACCCATATTCTCCT
ACGACCAATGCGCCTTTCAATTTTGATTTCCTTGATCCCAAAGACAATTCTCTGAATCCT
GTGTGGCCTCAGAATTCATTCAGTATCACCAACAACAATGATGTTCACAATTCCTTGACA
ATCCAGCCTCAACCCGTTGCCACACAGCCCTTACCCCTCCAACCCCAGGCTGCCCAGGAT
TATGATGAGATACATCCATTCTTCGATACTTTTGACGACAGACAGTCATACGTAGATTCC
AAAGAGGCTTATGAATCAAGCTCGGAATCATCCTTCAAAGATGCCACCCAGTCCACTGAC
AATGTTGCTGAGAATGAATTGAAAAGCGCTGCGGCATGCTTCAGTCTCATCAGTCTCGGC
CAATGA

Peptide Sequence

PEP ID

VIT_17s0000g05490.t01
PEP Infomation

pep chromosome:12X:17:5986034:5987218:-1 gene:VIT_17s0000g05490 transcript:VIT_17s0000g05490.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTLKGGTSQACAACKYQRRKCSSECPLAPYFPPDQPKMFADAHRLFGVSNILKILKQLDP
TQKLTAMQSIIYQATIRERYPVSGCLGLICQLHYQIRQTEDELHVVLSQLEICRQHHHQQ
IQMASAPSDSSSSPLELGCSALSLHHNPPPPPPEYNAVSVAGGGDGGLPVGVGTHHPYSP
TTNAPFNFDFLDPKDNSLNPVWPQNSFSITNNNDVHNSLTIQPQPVATQPLPLQPQAAQD
YDEIHPFFDTFDDRQSYVDSKEAYESSSESSFKDATQSTDNVAENELKSAAACFSLISLG
Q

Transcript Sequence

Transcript ID

VIT_17s0000g05490.t01
Transcript Infomation

cdna chromosome:12X:17:5986034:5987218:-1 gene:VIT_17s0000g05490 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GACATGACCCTTAAAGGTGGGACTAGCCAAGCATGCGCTGCCTGCAAGTACCAGAGGAGG
AAGTGCTCCTCTGAGTGTCCTCTTGCCCCTTACTTCCCTCCTGATCAGCCCAAAATGTTT
GCCGACGCTCACAGGCTCTTTGGTGTCAGCAACATCCTTAAAATTCTCAAGCAATTGGAC
CCCACCCAGAAACTCACCGCCATGCAGTCCATCATCTACCAGGCCACCATCCGTGAGCGC
TATCCGGTTAGCGGCTGCTTGGGTTTGATTTGCCAACTCCATTACCAAATCCGCCAGACC
GAGGACGAGCTTCATGTTGTCCTTTCACAGCTTGAAATCTGCCGCCAGCACCACCACCAA
CAGATACAGATGGCCTCTGCACCCAGTGATTCCTCCTCTTCCCCCTTGGAGCTAGGCTGC
AGTGCCCTCTCTCTCCATCATAACCCTCCTCCTCCTCCTCCGGAATACAACGCTGTTTCT
GTTGCTGGCGGTGGTGATGGTGGTCTGCCTGTTGGAGTTGGAACCCATCACCCATATTCT
CCTACGACCAATGCGCCTTTCAATTTTGATTTCCTTGATCCCAAAGACAATTCTCTGAAT
CCTGTGTGGCCTCAGAATTCATTCAGTATCACCAACAACAATGATGTTCACAATTCCTTG
ACAATCCAGCCTCAACCCGTTGCCACACAGCCCTTACCCCTCCAACCCCAGGCTGCCCAG
GATTATGATGAGATACATCCATTCTTCGATACTTTTGACGACAGACAGTCATACGTAGAT
TCCAAAGAGGCTTATGAATCAAGCTCGGAATCATCCTTCAAAGATGCCACCCAGTCCACT
GACAATGTTGCTGAGAATGAATTGAAAAGCGCTGCGGCATGCTTCAGTCTCATCAGTCTC
GGCCAATGATAAGAAGTGGGTAGCATTTCCAGATTCAATTGTATTTCAGTCCTCTGAGCA
TTTTTTTTCTATTGTTTTTGTGTTAATTTGTTTTCCTTTCACCTTCACCATTTCATGACT
GTTGTAGTGTTTTAAATTTCTATCATAACTCCCTCTTTCTACATTTTAATAATTCTATTG
AATTTGAT