Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g05470.t01
CDS Infomation

cds chromosome:12X:17:5959100:5961553:-1 gene:VIT_17s0000g05470 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTGAGCAGCAAATGGATTACTACAGTGGCAAGCATATGGATCCAGTGCACCTGCGGC
GGATCCTACGCCTTCGGCGTCTACTCATCGGTTCTCAAATCTAGCCAAAGTTACGACCAA
GCAACGCTCGATACCGTCTCCGTGTTCAAAGACATCGGAGCCAACGCCGGTGTCCTCTCC
GGCCTCCTCTACTCCGCCGCCTCTTCCGTTTCTTATCTCCTCAGTTTTGGTGGACCGTGG
GTGGTCCACGTGGCAGGGGCGATTCAGTGCTTTGCTGGCTATTTTCTTATATGGCTGTCC
GTCACTGGAGTCATTCATCGGCCTGCAGTGCCGCTGATGTGCTTGTTCATGTTCATCGCC
GCTCACGCTCAGACCTTCTTCAACACTGCTAATGTCGTCACCGCCGTTCAGAACTTCCCG
GATTATGGCGGCACCATCGTCGGTATCATGAAGGGCTTTCTTGGTCTGAGTGGGGCAGTG
TTAATCCAAGTGTACGATGCATTATTCGAAGGCAATCCGAGCATTTTCATTCTGATGCTT
GCGTTGCTGCCGACTTTCATCTCCCTCTTGCTGATGTGTTTGGTTAGAATCGATGAAAGA
GACACACAAGGCAACAAGAAGCAGTTGAATCGTTTCTCCACTGTCGCTCTCCTTGTTGCT
GCTTATCTTATGATCGTGATAATCTTGGAGAACATCTTTACTTTTCCGTTATGGGCACGC
ATCGCTACTCTCATACTTCTTTTGCTTCTGCTGGCTTCCCCTCTTGGAATCGCAGCCAAT
GCCCTTAAGGATGAATCAGAGATATCATCACAAGGGTTGGTGTCCTCCGAGAGGAGCCCA
TTGCTGAGTGACAATGGGTCCCTACAGTCTGAGAGGTGGTCTTCAGCTGCAGGGGATCCT
AAAGAACATCATGCAGCAGACGAAGACACCCCAATGCTGCAGGATGAGGAAGACCTGAAT
GTTGTGCAAGCCATGCGGACTGGAAACTTCTGGTTGTTGTTCATAGCCATGGCATGTGGA
ATGGGGTCCGGGCTGGCTACAATAAATAACATCAGCCAAATAGGAGAATCTCTTGGTTAC
ACTACAGTTGAGATAAACACTCTGGTTTCTTTGTGGAGTATATGGAATTTTCTTGGCCGT
TTTGGAGCTGGATATGTATCGGATATTCTGCTGCATAGAAGAGGCTGGGCAAGGCCATTG
TTGATGGTCATCACCCTGGCTACCATGACTATTGGCCATGTGATCATTGCCTCTGGTTTT
GCGGGGAATTTGTATGTGGGTTCAGTAATAGTAGGGGTTTGTTATGGTTCACAGTGGTCA
TTGATGCCCACCATCACTTCCGAGCTATTTGGTGTTGGGCACATGGGTACCATCTTCAAC
ACCATTGCCATAGCCAGTCCTGTTGGCTCTTACCTTCTCTCTGTTAGAGTAATCGGGTAC
ATCTATGACAAGGAAGCATCAGGCAAGCAGAACTCATGCTCCGGCACTCATTGTTTCATG
TTATCATTTCTGATCATCGGATGTGTTACTCTTTTTGGGTCACTCGTTGCTTCTGCATTG
TTCTTCCGAACAAAGAGGTTCTATAAGTTGGTTGTACTTAGAAGGCTAAACCTTTCTCTG
CAAGACGATGACAGGTAG

Peptide Sequence

PEP ID

VIT_17s0000g05470.t01
PEP Infomation

pep chromosome:12X:17:5959100:5961553:-1 gene:VIT_17s0000g05470 transcript:VIT_17s0000g05470.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLSSKWITTVASIWIQCTCGGSYAFGVYSSVLKSSQSYDQATLDTVSVFKDIGANAGVLS
GLLYSAASSVSYLLSFGGPWVVHVAGAIQCFAGYFLIWLSVTGVIHRPAVPLMCLFMFIA
AHAQTFFNTANVVTAVQNFPDYGGTIVGIMKGFLGLSGAVLIQVYDALFEGNPSIFILML
ALLPTFISLLLMCLVRIDERDTQGNKKQLNRFSTVALLVAAYLMIVIILENIFTFPLWAR
IATLILLLLLLASPLGIAANALKDESEISSQGLVSSERSPLLSDNGSLQSERWSSAAGDP
KEHHAADEDTPMLQDEEDLNVVQAMRTGNFWLLFIAMACGMGSGLATINNISQIGESLGY
TTVEINTLVSLWSIWNFLGRFGAGYVSDILLHRRGWARPLLMVITLATMTIGHVIIASGF
AGNLYVGSVIVGVCYGSQWSLMPTITSELFGVGHMGTIFNTIAIASPVGSYLLSVRVIGY
IYDKEASGKQNSCSGTHCFMLSFLIIGCVTLFGSLVASALFFRTKRFYKLVVLRRLNLSL
QDDDR

Transcript Sequence

Transcript ID

VIT_17s0000g05470.t01
Transcript Infomation

cdna chromosome:12X:17:5959100:5961553:-1 gene:VIT_17s0000g05470 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAAGATGTTGAGCAGCAAATGGATTACTACAGTGGCAAGCATATGGATCCAGTGCACCT
GCGGCGGATCCTACGCCTTCGGCGTCTACTCATCGGTTCTCAAATCTAGCCAAAGTTACG
ACCAAGCAACGCTCGATACCGTCTCCGTGTTCAAAGACATCGGAGCCAACGCCGGTGTCC
TCTCCGGCCTCCTCTACTCCGCCGCCTCTTCCGTTTCTTATCTCCTCAGTTTTGGTGGAC
CGTGGGTGGTCCACGTGGCAGGGGCGATTCAGTGCTTTGCTGGCTATTTTCTTATATGGC
TGTCCGTCACTGGAGTCATTCATCGGCCTGCAGTGCCGCTGATGTGCTTGTTCATGTTCA
TCGCCGCTCACGCTCAGACCTTCTTCAACACTGCTAATGTCGTCACCGCCGTTCAGAACT
TCCCGGATTATGGCGGCACCATCGTCGGTATCATGAAGGGCTTTCTTGGTCTGAGTGGGG
CAGTGTTAATCCAAGTGTACGATGCATTATTCGAAGGCAATCCGAGCATTTTCATTCTGA
TGCTTGCGTTGCTGCCGACTTTCATCTCCCTCTTGCTGATGTGTTTGGTTAGAATCGATG
AAAGAGACACACAAGGCAACAAGAAGCAGTTGAATCGTTTCTCCACTGTCGCTCTCCTTG
TTGCTGCTTATCTTATGATCGTGATAATCTTGGAGAACATCTTTACTTTTCCGTTATGGG
CACGCATCGCTACTCTCATACTTCTTTTGCTTCTGCTGGCTTCCCCTCTTGGAATCGCAG
CCAATGCCCTTAAGGATGAATCAGAGATATCATCACAAGGGTTGGTGTCCTCCGAGAGGA
GCCCATTGCTGAGTGACAATGGGTCCCTACAGTCTGAGAGGTGGTCTTCAGCTGCAGGGG
ATCCTAAAGAACATCATGCAGCAGACGAAGACACCCCAATGCTGCAGGATGAGGAAGACC
TGAATGTTGTGCAAGCCATGCGGACTGGAAACTTCTGGTTGTTGTTCATAGCCATGGCAT
GTGGAATGGGGTCCGGGCTGGCTACAATAAATAACATCAGCCAAATAGGAGAATCTCTTG
GTTACACTACAGTTGAGATAAACACTCTGGTTTCTTTGTGGAGTATATGGAATTTTCTTG
GCCGTTTTGGAGCTGGATATGTATCGGATATTCTGCTGCATAGAAGAGGCTGGGCAAGGC
CATTGTTGATGGTCATCACCCTGGCTACCATGACTATTGGCCATGTGATCATTGCCTCTG
GTTTTGCGGGGAATTTGTATGTGGGTTCAGTAATAGTAGGGGTTTGTTATGGTTCACAGT
GGTCATTGATGCCCACCATCACTTCCGAGCTATTTGGTGTTGGGCACATGGGTACCATCT
TCAACACCATTGCCATAGCCAGTCCTGTTGGCTCTTACCTTCTCTCTGTTAGAGTAATCG
GGTACATCTATGACAAGGAAGCATCAGGCAAGCAGAACTCATGCTCCGGCACTCATTGTT
TCATGTTATCATTTCTGATCATCGGATGTGTTACTCTTTTTGGGTCACTCGTTGCTTCTG
CATTGTTCTTCCGAACAAAGAGGTTCTATAAGTTGGTTGTACTTAGAAGGCTAAACCTTT
CTCTGCAAGACGATGACAGGTAGTAGAGGCAGTATATACTATGGTGTTCAAAGTATGATT
CATTGTTTATTTGTAATCCAGTTGTTGCTTCCTCTGTTTTTCTGAGGGAAGACACGAAAA
CAAATGTAATTCTTATTCCATCATCTTGATAATTTCCCAGGAGTTTCAATTCCTTGGTTC
TGATTCAGAATTGACACATGCCTCCTCTTTCTTATTATTAAAACCAAGCTGCCTATTACT
TTATATATTTG