Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g05460.t01
CDS Infomation

cds chromosome:12X:17:5956449:5958829:-1 gene:VIT_17s0000g05460 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGAGGATACAGAGCAAGTGGATAGCTACATTAGCGAGCATATGGATCCAGTGCAGC
AGCGGCTCACTCTACACTTTCAGCATCTTCTCTTCGGCTCTCAAATCAAGCCAAGGTTAC
GACCAATCAACGCTCGACACCGTCTCTGTTGTCAAAGACGTCGGAGCCACCGCCGGTGTT
CTCTCCGGCTTCCTCTACTCCGCGGTCGCCGTCCCCCACCGCAGCCGCCGCTCCTCTTCT
TGCTTTCTTCGTGGCCCATGGGTGGTTATCGCTGTGGGGGCGATCCAGTGCTTTGCGGGC
TATTTCTTCTTATGGCTTTCTGTCGCCGGAGCCATTCCCCGGCAGCCGGTGCCGCTCATG
TGCCTCTTCATGTTCCTGACGGCTCATGCTCAGACCTTTTTCAACACGGCTAACGTGGTC
ACCGCTGTTCACAACTTCCCTGATTTTAGCGGCACAGTTGTTGGCATCATGAAGGGTTTT
CTTGGTTTGAGTGGAGCAATATTAATTCAATTATATCAGGCAATATTCAAGGGAAACCCT
GCCTCATATCTTCTCATGCTGATGCTGGTGACCACTGTCAATCCTCTGTTGCTCATGTGT
TTGGTCAGAATCTATAATACAAAAGAAGGAGATGAGAAGAAGCACCTGAATGGTTTTTCA
TTGGTTGCTTTAGTTGTAGCTGGTTACCTGATGGCCTTAATAATCTTAGAGAACATCCTC
ACTTTGCAATTTCCAGCACGCCTTTTTACCCTTGTTCTTCTGCTGCTGCTGCTTGCCATG
CCTCTTGCTGTTACAATTAAAGCCCAGCAGAGCAACTTTGATGGAACTTCTCAAACTTTC
TTGATTGAGAAGAACCAATTAATAGATGACCCAAAACAATTGGATGCTGAGAAAATAGGT
AAAGGGCAAGATCCTGCTGGATATCATTTGGTGCATAGTGATGCTGAACAAGAGAGAAAT
AATGATGATAATAGGGTTTTACTCCAGGGAGAAAACCTGAATCTGTTGCAAGCCATGGGC
ACCTGTAACTTTTGGTGTTTGTTTCTTGCCATGGCATGTGGAATGGGTTCAGGACTTGCC
ACAGTGAATAACATTGGCCAAATTGGAGGAGCATTTGGTTACAAAAGCTTTGAGACAAGT
ACTTTAGTTTCTTTATGGAGCATTTGGAATTTTCTTGGTCGTTTTGGAACTGGTTATGTA
TCAGACTATTTCCTGCATACAAGAGGATGGGCAAGGCCAGTATTCATGGTCATCACTCTT
GCAACCATGAGTATTGGTCATTTTGTTATTGCTTCTGGTATGCCTGGTGCTCTTTATGCT
GGTTCAGTATTAGTGGGTGTATCTTATGGTTCACAATGGTCACTAATGCCCACAATCACT
TCTGAGATATTTGGTGTACAGCATTTGGGCACCATATTCAACACCATTACCATGGCAAGT
CCAGTTGGATCTTATATTTTCTCGGTGAGGGTGGTTGGCTACATTTATGATAAAGAAGCA
TCAGCAGACGGGAATAAATGCACAGGAACTCACTGCTTCATGGTATCTTTTCTCATTATG
GCATCAGCTACCCTGTTGGGGTGTTTTGTTGCTTTGATATTGTTCCTCCGAACTAAAAGC
TTCTATAACCAAGTTGTACTACGAAGACTGCAACATCCGGGTAGAGTGTAA

Peptide Sequence

PEP ID

VIT_17s0000g05460.t01
PEP Infomation

pep chromosome:12X:17:5956449:5958829:-1 gene:VIT_17s0000g05460 transcript:VIT_17s0000g05460.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MERIQSKWIATLASIWIQCSSGSLYTFSIFSSALKSSQGYDQSTLDTVSVVKDVGATAGV
LSGFLYSAVAVPHRSRRSSSCFLRGPWVVIAVGAIQCFAGYFFLWLSVAGAIPRQPVPLM
CLFMFLTAHAQTFFNTANVVTAVHNFPDFSGTVVGIMKGFLGLSGAILIQLYQAIFKGNP
ASYLLMLMLVTTVNPLLLMCLVRIYNTKEGDEKKHLNGFSLVALVVAGYLMALIILENIL
TLQFPARLFTLVLLLLLLAMPLAVTIKAQQSNFDGTSQTFLIEKNQLIDDPKQLDAEKIG
KGQDPAGYHLVHSDAEQERNNDDNRVLLQGENLNLLQAMGTCNFWCLFLAMACGMGSGLA
TVNNIGQIGGAFGYKSFETSTLVSLWSIWNFLGRFGTGYVSDYFLHTRGWARPVFMVITL
ATMSIGHFVIASGMPGALYAGSVLVGVSYGSQWSLMPTITSEIFGVQHLGTIFNTITMAS
PVGSYIFSVRVVGYIYDKEASADGNKCTGTHCFMVSFLIMASATLLGCFVALILFLRTKS
FYNQVVLRRLQHPGRV

Transcript Sequence

Transcript ID

VIT_17s0000g05460.t01
Transcript Infomation

cdna chromosome:12X:17:5956449:5958829:-1 gene:VIT_17s0000g05460 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAAGGGGCGAAGTGAGAGATGGAGAGGATACAGAGCAAGTGGATAGCTACATTAGCGAGC
ATATGGATCCAGTGCAGCAGCGGCTCACTCTACACTTTCAGCATCTTCTCTTCGGCTCTC
AAATCAAGCCAAGGTTACGACCAATCAACGCTCGACACCGTCTCTGTTGTCAAAGACGTC
GGAGCCACCGCCGGTGTTCTCTCCGGCTTCCTCTACTCCGCGGTCGCCGTCCCCCACCGC
AGCCGCCGCTCCTCTTCTTGCTTTCTTCGTGGCCCATGGGTGGTTATCGCTGTGGGGGCG
ATCCAGTGCTTTGCGGGCTATTTCTTCTTATGGCTTTCTGTCGCCGGAGCCATTCCCCGG
CAGCCGGTGCCGCTCATGTGCCTCTTCATGTTCCTGACGGCTCATGCTCAGACCTTTTTC
AACACGGCTAACGTGGTCACCGCTGTTCACAACTTCCCTGATTTTAGCGGCACAGTTGTT
GGCATCATGAAGGGTTTTCTTGGTTTGAGTGGAGCAATATTAATTCAATTATATCAGGCA
ATATTCAAGGGAAACCCTGCCTCATATCTTCTCATGCTGATGCTGGTGACCACTGTCAAT
CCTCTGTTGCTCATGTGTTTGGTCAGAATCTATAATACAAAAGAAGGAGATGAGAAGAAG
CACCTGAATGGTTTTTCATTGGTTGCTTTAGTTGTAGCTGGTTACCTGATGGCCTTAATA
ATCTTAGAGAACATCCTCACTTTGCAATTTCCAGCACGCCTTTTTACCCTTGTTCTTCTG
CTGCTGCTGCTTGCCATGCCTCTTGCTGTTACAATTAAAGCCCAGCAGAGCAACTTTGAT
GGAACTTCTCAAACTTTCTTGATTGAGAAGAACCAATTAATAGATGACCCAAAACAATTG
GATGCTGAGAAAATAGGTAAAGGGCAAGATCCTGCTGGATATCATTTGGTGCATAGTGAT
GCTGAACAAGAGAGAAATAATGATGATAATAGGGTTTTACTCCAGGGAGAAAACCTGAAT
CTGTTGCAAGCCATGGGCACCTGTAACTTTTGGTGTTTGTTTCTTGCCATGGCATGTGGA
ATGGGTTCAGGACTTGCCACAGTGAATAACATTGGCCAAATTGGAGGAGCATTTGGTTAC
AAAAGCTTTGAGACAAGTACTTTAGTTTCTTTATGGAGCATTTGGAATTTTCTTGGTCGT
TTTGGAACTGGTTATGTATCAGACTATTTCCTGCATACAAGAGGATGGGCAAGGCCAGTA
TTCATGGTCATCACTCTTGCAACCATGAGTATTGGTCATTTTGTTATTGCTTCTGGTATG
CCTGGTGCTCTTTATGCTGGTTCAGTATTAGTGGGTGTATCTTATGGTTCACAATGGTCA
CTAATGCCCACAATCACTTCTGAGATATTTGGTGTACAGCATTTGGGCACCATATTCAAC
ACCATTACCATGGCAAGTCCAGTTGGATCTTATATTTTCTCGGTGAGGGTGGTTGGCTAC
ATTTATGATAAAGAAGCATCAGCAGACGGGAATAAATGCACAGGAACTCACTGCTTCATG
GTATCTTTTCTCATTATGGCATCAGCTACCCTGTTGGGGTGTTTTGTTGCTTTGATATTG
TTCCTCCGAACTAAAAGCTTCTATAACCAAGTTGTACTACGAAGACTGCAACATCCGGGT
AGAGTGTAAAAAGTTTTTTAAGTGTTTAAGAAATGTGTGCGAGGGTGTAATTGCTAGATT
GCTTTCTTTT