Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g05450.t01
CDS Infomation

cds chromosome:12X:17:5938805:5950398:-1 gene:VIT_17s0000g05450 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGACCAAGGGAGGCAAAGTCATGAACCCTACGGATGCTTATCGGAAAGAACTTCGC
AAGAAGGAGTTGAAAAGGAACAAGAAAGAAAGGAAGAAGGTGAGAGAGGTGGGGATTTTA
AAGAAGGACCCTGAGACACTGAGGGAGCAGATTGATAAGTTGGAAATGATGAAGGCAGAT
GGTGCTCTGGACAAAGCAAGAAAACACAAGAAGAGGCAACTTGAGGATACACTGAACCTC
GTCTTAAAGAAAAGAAAGGAATATGAAGAGAAATTGAAGGAGAAGGGTGAGGCCCCAGTT
ATGTTCAGTCATTTGGGACCTCCTAGAAGACGGACAACTGCAGAAGAAGAAGAGAGAGTC
AAGCACCCAAAACCTGAAGACTCTGTTTATTATCACCCTACGCTGAATCCTACTGGGGCC
CCACCACCTGGAAAGCCTCCCATGTTTAAATCATCAATAGGACCCAGGATTCCCTTATCA
GCAGCTTCATCGAGTGGTGCTGCTTCATCCTCAATGACAGATTCAGAGGATGCTGATTTA
GTTGTACCCCCTCCACCTCCACCACCTCCCCCATTGCCAGATACTGGTCATCTGGAACCT
GGAGATAGCTCTGTTATGCCTGCTTCCTTGCCTCTACCTCCTCCACCTCCAATGCCGCCA
AAGCCTGCTATGGCAGACTTGGGTGCATTGCCTCCACCACCTTTGCCACCTCCACCTCCT
GGTCCCCCACCTAAAGAACAGGTCACAACTCACCCTTCACTTCCTCCGCCTCCACTCATC
CAACAGTCTTCTCAGCCACCTCCACCTGGTATTGGCAGGATGGAAGGGGAGAAGACTCAA
TCTGCAACATCTGATGATCAAACCTCCAAGGAGCCAGTTCAGGTCCCAACAGTGCTCCCT
CCACCTCCCCCACCACCTGGCCTGCCGCTGAAGTTGGTAAGCAATCAGACTGAAGGCACA
CTACCTGAATCTGACATCAATAATCCTTCAGGCACCAAGGAGATCCCTATGGTCCCTCCT
CCTCCTCCTCCTCCACGGCAACAGCCTCCGGTGCCTAGACCTGGCCTGATCCCAACTTTG
CAGCCTGATGTATTATCCCCTGGAATTTCACGTTTCCCTCCACCCCCACCTCCACCTCCT
GGACTTCCCAGCCAAGCTGCTCCCCCTGGAATCATGGTCCCTCTAATTCCAAGGCCACCT
TTTGGACCTCCCCCAATGATGAGACCACCACTTCCACCTGGTGCTGTTCCCACCTTACAA
GAAGATGATTATGCTGCAATTAGACCACCGATGCCACAGAAGCCATCATATGTCAAATCA
GCTGCATCAACTGTTGTTAAGAGGCCACTAGCTCAGCACACTCCGGAGCTTACAGCTATG
GTTCCTGCATCTGTACGTGTGAGGAGAGAGATTGCTGCTCCAAAAGCAAAACCAAAACCA
TCCGTTTCAACCATTTCAGCAGTGCCCGGGCAAGCAGCTCCTTCTGTTGTGAAGCCAGAG
TTGGTAAACCCATCAGCAGCCGCAGCAAGGCCACAGAGCATTGACGACTCATACATGGCC
TTCCTGGAAGACATGAAAGCGCTTGGTGCACTTGACAGTTGA

Peptide Sequence

PEP ID

VIT_17s0000g05450.t01
PEP Infomation

pep chromosome:12X:17:5938805:5950398:-1 gene:VIT_17s0000g05450 transcript:VIT_17s0000g05450.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKTKGGKVMNPTDAYRKELRKKELKRNKKERKKVREVGILKKDPETLREQIDKLEMMKAD
GALDKARKHKKRQLEDTLNLVLKKRKEYEEKLKEKGEAPVMFSHLGPPRRRTTAEEEERV
KHPKPEDSVYYHPTLNPTGAPPPGKPPMFKSSIGPRIPLSAASSSGAASSSMTDSEDADL
VVPPPPPPPPPLPDTGHLEPGDSSVMPASLPLPPPPPMPPKPAMADLGALPPPPLPPPPP
GPPPKEQVTTHPSLPPPPLIQQSSQPPPPGIGRMEGEKTQSATSDDQTSKEPVQVPTVLP
PPPPPPGLPLKLVSNQTEGTLPESDINNPSGTKEIPMVPPPPPPPRQQPPVPRPGLIPTL
QPDVLSPGISRFPPPPPPPPGLPSQAAPPGIMVPLIPRPPFGPPPMMRPPLPPGAVPTLQ
EDDYAAIRPPMPQKPSYVKSAASTVVKRPLAQHTPELTAMVPASVRVRREIAAPKAKPKP
SVSTISAVPGQAAPSVVKPELVNPSAAAARPQSIDDSYMAFLEDMKALGALDS

Transcript Sequence

Transcript ID

VIT_17s0000g05450.t01
Transcript Infomation

cdna chromosome:12X:17:5938805:5950398:-1 gene:VIT_17s0000g05450 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAAGATGAAGACCAAGGGAGGCAAAGTCATGAACCCTACGGATGCTTATCGGAAAGAACT
TCGCAAGAAGGAGTTGAAAAGGAACAAGAAAGAAAGGAAGAAGGTGAGAGAGGTGGGGAT
TTTAAAGAAGGACCCTGAGACACTGAGGGAGCAGATTGATAAGTTGGAAATGATGAAGGC
AGATGGTGCTCTGGACAAAGCAAGAAAACACAAGAAGAGGCAACTTGAGGATACACTGAA
CCTCGTCTTAAAGAAAAGAAAGGAATATGAAGAGAAATTGAAGGAGAAGGGTGAGGCCCC
AGTTATGTTCAGTCATTTGGGACCTCCTAGAAGACGGACAACTGCAGAAGAAGAAGAGAG
AGTCAAGCACCCAAAACCTGAAGACTCTGTTTATTATCACCCTACGCTGAATCCTACTGG
GGCCCCACCACCTGGAAAGCCTCCCATGTTTAAATCATCAATAGGACCCAGGATTCCCTT
ATCAGCAGCTTCATCGAGTGGTGCTGCTTCATCCTCAATGACAGATTCAGAGGATGCTGA
TTTAGTTGTACCCCCTCCACCTCCACCACCTCCCCCATTGCCAGATACTGGTCATCTGGA
ACCTGGAGATAGCTCTGTTATGCCTGCTTCCTTGCCTCTACCTCCTCCACCTCCAATGCC
GCCAAAGCCTGCTATGGCAGACTTGGGTGCATTGCCTCCACCACCTTTGCCACCTCCACC
TCCTGGTCCCCCACCTAAAGAACAGGTCACAACTCACCCTTCACTTCCTCCGCCTCCACT
CATCCAACAGTCTTCTCAGCCACCTCCACCTGGTATTGGCAGGATGGAAGGGGAGAAGAC
TCAATCTGCAACATCTGATGATCAAACCTCCAAGGAGCCAGTTCAGGTCCCAACAGTGCT
CCCTCCACCTCCCCCACCACCTGGCCTGCCGCTGAAGTTGGTAAGCAATCAGACTGAAGG
CACACTACCTGAATCTGACATCAATAATCCTTCAGGCACCAAGGAGATCCCTATGGTCCC
TCCTCCTCCTCCTCCTCCACGGCAACAGCCTCCGGTGCCTAGACCTGGCCTGATCCCAAC
TTTGCAGCCTGATGTATTATCCCCTGGAATTTCACGTTTCCCTCCACCCCCACCTCCACC
TCCTGGACTTCCCAGCCAAGCTGCTCCCCCTGGAATCATGGTCCCTCTAATTCCAAGGCC
ACCTTTTGGACCTCCCCCAATGATGAGACCACCACTTCCACCTGGTGCTGTTCCCACCTT
ACAAGAAGATGATTATGCTGCAATTAGACCACCGATGCCACAGAAGCCATCATATGTCAA
ATCAGCTGCATCAACTGTTGTTAAGAGGCCACTAGCTCAGCACACTCCGGAGCTTACAGC
TATGGTTCCTGCATCTGTACGTGTGAGGAGAGAGATTGCTGCTCCAAAAGCAAAACCAAA
ACCATCCGTTTCAACCATTTCAGCAGTGCCCGGGCAAGCAGCTCCTTCTGTTGTGAAGCC
AGAGTTGGTAAACCCATCAGCAGCCGCAGCAAGGCCACAGAGCATTGACGACTCATACAT
GGCCTTCCTGGAAGACATGAAAGCGCTTGGTGCACTTGACAGTTGAGCTGATTGTAACCA
GAGAGCTGTATCTGACACAAGATGACAGACATGCTATGAAAGCAAACAAATGTGTACAGG
CTTATTGTAGAGGACGTTGGCCCCTTTGAGAGAAGAAATGCTTCATTGTCAGTAGCCTTG
ACGACCTTTGGCTGTGTCTTCCTGGAAACTCCCTTGTATTAAGTAGTAAATTAGTAAATC
CGTTTAGCAACTTTTTGAACCTCATTCTTGAAATGGTGTAACTTTGGGCTAATTTTCTCT
AGTCAACGAGAAGAGAGCTGGGAATTAATCACACTAAAATTACTAGAATTTTTACCATTC
CCTCTTTTTTCTCTGCT