Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g05370.t01
CDS Infomation

cds chromosome:12X:17:5834834:5839220:-1 gene:VIT_17s0000g05370 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATCCTCCACTCATCAATGAGTCTTCCTTCTCTGCGGCCAATCCCTCCGCCTACTCA
CTAGCTGAGATTTGGCCTTTTCCCGTCAACTCTGCCTCTGCAATTGGGGAACCCACTGCC
GGGTTGGGTCTCAGGATCGCTAATTTTGGCCAAATTATGGGTCAATTTGCAGATAGCTCT
GCAAATCGTGACGTGTCTGTTGATGAATCGACTGTGACGGAGCAGAGTGGGAGTCGTGGC
GGTGGAAGGAAGAGGAGGGATGTGAGTTCGGAGGATGAGTCTTCCAAGATTGTTTCTACT
AGTAGTGGCAGTGGCATGAATGCATCGAATGGTAAACGTATGAAAATATCAAGAACTCCT
GATGAAAATGGTGGTTCAAAAGCAGAATTAGAAGCTAGTTCAGTGGCTGGTGAAAAGCCC
GCTGAAGAATCTAAACCTGCTGAGCAGTCTAAGCAAGACTATATCCATGTGAGAGCAAGA
AGGGGTCAAGCTACTGATAGCCATAGTCTAGCAGAGCGAGCTAGGAGAGAAAAGATCAGT
GAGAGGATGAAGATTCTTCAAGATTTGGTTCCTGGATGTAATAAGGTTATTGGAAAAGCA
CTTGTCCTTGATGAGATAATCAACTACATCCAGTCACTACAGCGTCAAGTTGAGTTCCTG
TCAATGAAGCTTGAAGCAGTTAATTCAAGGATGAACCATACTGTTGAAGGATTTCCTTTG
AAAGATCTTGGGGTACAGACATTTGATGCTGCTGCAATGATATATGGATCACAAGCAACC
AGGGAATATGCTCAAGGATCGCAACCTGAATGGCTACATATGCAGGTTGGTGGCAGTATT
GAAAGAGCATCCTAG

Peptide Sequence

PEP ID

VIT_17s0000g05370.t01
PEP Infomation

pep chromosome:12X:17:5834834:5839220:-1 gene:VIT_17s0000g05370 transcript:VIT_17s0000g05370.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDPPLINESSFSAANPSAYSLAEIWPFPVNSASAIGEPTAGLGLRIANFGQIMGQFADSS
ANRDVSVDESTVTEQSGSRGGGRKRRDVSSEDESSKIVSTSSGSGMNASNGKRMKISRTP
DENGGSKAELEASSVAGEKPAEESKPAEQSKQDYIHVRARRGQATDSHSLAERARREKIS
ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNHTVEGFPL
KDLGVQTFDAAAMIYGSQATREYAQGSQPEWLHMQVGGSIERAS

Transcript Sequence

Transcript ID

VIT_17s0000g05370.t01
Transcript Infomation

cdna chromosome:12X:17:5834834:5839220:-1 gene:VIT_17s0000g05370 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCACTCTCTTTCATTATCATCAATTTTCTCTGGACTCACCCCCAATTCTCTTCTTAAAT
ACAACGACACACCCAGTTATTCACTTCGAAATTCCTAGAATCAAACTCAGTCTTTCACCC
AGTTCTCAGACTCGGGTTTGGAATTGGAAGCCCCTTTTATGAATTCTGGGTTGTTCAAAT
GGATCCTCCACTCATCAATGAGTCTTCCTTCTCTGCGGCCAATCCCTCCGCCTACTCACT
AGCTGAGATTTGGCCTTTTCCCGTCAACTCTGCCTCTGCAATTGGGGAACCCACTGCCGG
GTTGGGTCTCAGGATCGCTAATTTTGGCCAAATTATGGGTCAATTTGCAGATAGCTCTGC
AAATCGTGACGTGTCTGTTGATGAATCGACTGTGACGGAGCAGAGTGGGAGTCGTGGCGG
TGGAAGGAAGAGGAGGGATGTGAGTTCGGAGGATGAGTCTTCCAAGATTGTTTCTACTAG
TAGTGGCAGTGGCATGAATGCATCGAATGGTAAACGTATGAAAATATCAAGAACTCCTGA
TGAAAATGGTGGTTCAAAAGCAGAATTAGAAGCTAGTTCAGTGGCTGGTGAAAAGCCCGC
TGAAGAATCTAAACCTGCTGAGCAGTCTAAGCAAGACTATATCCATGTGAGAGCAAGAAG
GGGTCAAGCTACTGATAGCCATAGTCTAGCAGAGCGAGCTAGGAGAGAAAAGATCAGTGA
GAGGATGAAGATTCTTCAAGATTTGGTTCCTGGATGTAATAAGGTTATTGGAAAAGCACT
TGTCCTTGATGAGATAATCAACTACATCCAGTCACTACAGCGTCAAGTTGAGTTCCTGTC
AATGAAGCTTGAAGCAGTTAATTCAAGGATGAACCATACTGTTGAAGGATTTCCTTTGAA
AGATCTTGGGGTACAGACATTTGATGCTGCTGCAATGATATATGGATCACAAGCAACCAG
GGAATATGCTCAAGGATCGCAACCTGAATGGCTACATATGCAGGTTGGTGGCAGTATTGA
AAGAGCATCCTAGTGTTATAGAGAACTGTCATCAATGGGCAATAGGGGAACCGAGCAGCA
AAATTAATTCTTCAACATGTTTCCTGAAGTCTAGGACCACTTTGTTGTTGGCTTCTACAT
GTTATCCAGAGCCATGCTTCCTAAATATGTGTCAGTCCTTGCATTTGTAATCAGAAACCT
AAATCTTCCATCGAAAAATGCATTCCATCTCAGTATGTGTCATCTAACTCAAATTTACTG
TACTTAATATTGTACCAGTCACCAAATGGTGAATGTAGTATCTAAACATTAATATATGTA
ACCAAGGATGTGCCTTAAAAGAA