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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g05350.t01
CDS Infomation

cds chromosome:12X:17:5826959:5832071:1 gene:VIT_17s0000g05350 gene_biotype:protein_coding transcript_biotype:protein_coding description:5-formyltetrahydrofolate cyclo-ligase [Source:UniProtKB/TrEMBL;Acc:D7SIJ5]
Sequence

ATGACCAACAATACCCATCAATCCAGTAATACCCACCTCGAAGCCGTCTTCAAGCAGAAG
AAGATCCTCCGATCCAGCGTCCGCAAAGCACTCAAGGGCATGGACCCCTCTTCCAGATCT
CAAGAGGATAATGCAGTTCAGAATATCATCCTGGAAGCTCCATGGTTTAGATCTAGTCAG
AGATTATGCGCTTATATAAGTTGCAGTTCTTTGCGAGAAGTTGATACATCAAAAGTTCTG
TCAGAAATTCTACAGAATCCAGCCAAAGATGGTCATACACAGATGGGGAAAAAGCTTTAT
GTCCCACGTGTGGAGGACAAAAATAGTTACATGCGGATGCTGAATATTACACATATGGAT
GATCTAATTTCAAATTCAATGAACATTTTAGAACCAGCTCCAGTAGATGGTGATGGCAAT
GAACGTGAAGATGTTATGCAGGCAACTGACCCAGTTGACTTGCTCCTATTACCTGGACTT
GCTTTTGACAAATCTGGAAGACGCTTGGGTCGTGGTGGAGGTTACTATGATGCCTTCCTG
AAGAACTACCTAGAGCTTGTGAAGGAGCGGAATTGGAAGCAACCCCTCCTTGTTGCATTG
TCGTATTCTGTGCAGATAATGGATGAGGGAGTTATACCAGTCACTCCAAATGATGTTCCT
GTGGATGCTCTTGTATCCCCAGCAGGTGTGATCCCCATCACCACAGCTGCACAGGAGAGG
TGTCATTGA

Peptide Sequence

PEP ID

VIT_17s0000g05350.t01
PEP Infomation

pep chromosome:12X:17:5826959:5832071:1 gene:VIT_17s0000g05350 transcript:VIT_17s0000g05350.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:5-formyltetrahydrofolate cyclo-ligase [Source:UniProtKB/TrEMBL;Acc:D7SIJ5]
Sequence

MTNNTHQSSNTHLEAVFKQKKILRSSVRKALKGMDPSSRSQEDNAVQNIILEAPWFRSSQ
RLCAYISCSSLREVDTSKVLSEILQNPAKDGHTQMGKKLYVPRVEDKNSYMRMLNITHMD
DLISNSMNILEPAPVDGDGNEREDVMQATDPVDLLLLPGLAFDKSGRRLGRGGGYYDAFL
KNYLELVKERNWKQPLLVALSYSVQIMDEGVIPVTPNDVPVDALVSPAGVIPITTAAQER
CH

Transcript Sequence

Transcript ID

VIT_17s0000g05350.t01
Transcript Infomation

cdna chromosome:12X:17:5826959:5832071:1 gene:VIT_17s0000g05350 gene_biotype:protein_coding transcript_biotype:protein_coding description:5-formyltetrahydrofolate cyclo-ligase [Source:UniProtKB/TrEMBL;Acc:D7SIJ5]
Sequence

AATGAGTAGAACTGGGTTGAGGCAAAAGGCCAAGTTGGTGCTGATGACCCAGCCATACTC
CATAGCAACAGTACTTGCTCAGGCGCCCTTCTGCTCCCTCTTCAACCCACTACCGGCTCC
TCGCTCCATCGTCACAATGACCAACAATACCCATCAATCCAGTAATACCCACCTCGAAGC
CGTCTTCAAGCAGAAGAAGATCCTCCGATCCAGCGTCCGCAAAGCACTCAAGGGCATGGA
CCCCTCTTCCAGATCTCAAGAGGATAATGCAGTTCAGAATATCATCCTGGAAGCTCCATG
GTTTAGATCTAGTCAGAGATTATGCGCTTATATAAGTTGCAGTTCTTTGCGAGAAGTTGA
TACATCAAAAGTTCTGTCAGAAATTCTACAGAATCCAGCCAAAGATGGTCATACACAGAT
GGGGAAAAAGCTTTATGTCCCACGTGTGGAGGACAAAAATAGTTACATGCGGATGCTGAA
TATTACACATATGGATGATCTAATTTCAAATTCAATGAACATTTTAGAACCAGCTCCAGT
AGATGGTGATGGCAATGAACGTGAAGATGTTATGCAGGCAACTGACCCAGTTGACTTGCT
CCTATTACCTGGACTTGCTTTTGACAAATCTGGAAGACGCTTGGGTCGTGGTGGAGGTTA
CTATGATGCCTTCCTGAAGAACTACCTAGAGCTTGTGAAGGAGCGGAATTGGAAGCAACC
CCTCCTTGTTGCATTGTCGTATTCTGTGCAGATAATGGATGAGGGAGTTATACCAGTCAC
TCCAAATGATGTTCCTGTGGATGCTCTTGTATCCCCAGCAGGTGTGATCCCCATCACCAC
AGCTGCACAGGAGAGGTGTCATTGAGCAAACATCCTTCTCAACTGTTCTACCAAGTGTGC
TGATTTCATTCCTTTCATTTAACCAACAGACTTGTAGAACGACCTTCCAAATGAAACTTC
ACCAAAGCAAAAAGAAAAAAGGCCATTTTTATTACAAGAGGGTTCCCAAAAATTCAGTTG
TTTTGGTCCATTCTGATTGTTAAGGTGTCATGGTTGATATTCCCCTGCTTTGTGTAATAA
AGAAAGAACTAGACTTGAAATTATGCCTTTTTCAAA