Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g05210.t01
CDS Infomation

cds chromosome:12X:17:5700375:5706514:1 gene:VIT_17s0000g05210 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGCAAAGCTTCTGCATTCCTTAACAGATGATAACCCAGATTTGCAGAAGCAAATT
GGGTGCATGGCTGGGATCTTTCAACTCTTTGATCATCACCATATCCTCACCGGAAGGCGC
ATCAGCCACAAGAGGCTTCTTCCAGGTAATTCCTACCTCAACAGCAGCCTGGAAACGAAT
TCTACTAATGTAGGCCACCGACATACTGCAGCAGGAAAAAATTCAAACAAAAGTGTGAAT
GAGAAACAAAAATTCTCCACAGAATCATCCAGAGTTTCATTCTCATCTTCGTCTTGTTCA
TCTTCTATGTCCTCTCTCGAATGTAACAAAACAGCTCAACCAGAACCTTGTTCCTTTGAC
CGAATCATTTTTCCTGAAACTCACTCAAGGGATCCAGCCATGAACCAGTTAAGTGCCTCT
CCACAATTAGGGCGGCAATCGCTTGATCTTCGTGATTTGGTCAAGGATTCTATGTACAGA
GAAGTACGAGGGCTGTCAGTTAAGACTACAACCAGAGAAGAAGCTGTGGGCCATGCCGTG
AAGCCTAAAGACTCTCCAAGGCCTTCACAGCCATCCAAATCAATGGATGGATCTTATGGA
GTTGGTACCAAAGGGAAGCAAAATGTGCCTGTTGATCTCAAGGAGTCTCTTAGAGTTCTT
GCCAAGCTTCGAGAAGCACCTTGGTATTTCAATGAAGCTAGAGAACTTCCAAGATCATCA
TATGAAGCAAAAGATGGACCTTTGCCTTCAATTCCAAAAGATGCTCCTCGGTTTTCTTAT
GATGGGAGGGAGATAAACCGCTTATCCTTTGAATCACAAGATACCTCCAAAGGCACCCCA
AAGCTGAAAGAACTACCAAGACTTTCATTGGACAGCAGAGAGGGTTCCATGCGGGGTTCG
AACTTTGATTCAAGATCAAATTCCGTTTTGAGGAATTTGCAGAAGGGCAGTGCCAACTCT
AAAGACAATGTCCCAAATTTAAAGCAAATATCAGAGTCTCAGAAACGGCCTCCTAGCGTT
GTTGCTAAGTTGATGGGCTTGGAAGCTTTACCAGATTCCATATCAGTCCATGATAGTCAG
ATGGGGTTGATCAGAACCTGCCCAATCCAGGATTGTGATCCCTTCTCAAGGTCACCTAAA
ACACCTGATCCAAGTAGTAGGCCAATCCAGATGCCCTACTCCCCTAGAAGCTCATGGAAG
GAACCAACTTCACCAAGGTGGAGAAATCCAGATTCAGTCATGAAACCTATCTCAAGTTCA
AGGTTTCCCATTGAACCAGCACCATGGAGACAGCAGGATGGAAGTCGGGGCTCTCTAAAA
CCAGCTTCTAGGAATATAAAAGCTCCAGCAAGGGCACCAAATTCCTTCCCATCTGTGTAT
AGTGAGATTGAGAAAAGATTGAAAGATCTTGAATTTAAACAATCTGGAAAGGATCTAAGA
GCTCTTAAACAAATATTAGAAGCAATGCAGGCAAAGGGACTCTTGGAGACCAGAAGAGAA
GAGCAACCTTCCAACTTTGGAACTAAAAGAGATGAGCCAAAATATACCAGCTTTGATCAG
AAGGTAAGACTGGCAAGCCAACGAAAAACTCAACATGATACTGTTTGTGCTGCCACTGCT
GGGGGGGCTAATTCTCGAAGGAGTTTTGATTCCCCAATTGTGATCATGAAACCAGCCAAA
CTAGTTGAGAAATCTAGTATTCCTGCTTCCTCCGTAATTTCAATTGATGGTTTTTCCAGT
TTCCATAAGCCTCAGGGTGGCAACTTTGCAGATAACAGAAAGGATTCAGTTAATAGCCAA
ACAGCTAAAGTTTTTACTCCTAAAAATAGTAGCAGAGATCATGTTACTAGTTCCATTGAT
AAGAGAAGCAATGTCAGAAACTCAAGAGCAGCACAAACTCCAACAAGGCCTCAACAGTTG
CCTAAAGAAAATACCTCAAGCTTGGTAAAGAGCTCAGGATCTGTAAGCCCAAGACTACAG
CAAAAGAAGCTCGAGTTAGAGAAGCGATCTCGACTGCCCAGCACTTCATCTGAATTGGGC
AAATCAAGAAGGCAATCCCACAAGATGCCAACAGAATCAAGTTCGCCAGGAGGAAAATGC
AGACCAAAATCTCCCAACTTGCAGCAAAGTGATGACCAACTGAGTGAGATAAGTAGCGAA
TCAAGAAACTTGAGTTACCAGGGAGATGACATTTCTGTGCATTCAGACAGCAACATGGAA
GTCACCAGTACTGAACACTCTACTGAGATCAATGGCAGCCGGAGTCCATCCATGAAGGCT
GCCAATTGTCCAACTTCTGGCTTATTAAAGAAAAAATCAACTTCAAGGTTGGCCGAAGAT
GTGTCATTGGCAGAACTTGCTACAATTGCCCCCGAGCAGCCCAGCCCTGTCTCTGTTCTT
GATGCTTCAGTGTACATAGATGATGCACCATCTCCTGTGAAGCAGACACCAACTGCTCTG
AAAGATAATGGGAGTTGGAATTCCAGCAACAATCATGATGAAGAGCAATGGAAGCTGAAG
GATGATATCTTATCTAACAGCACAGGATCAGGCGTTACCTCTGAGATCAACCGCAAAAAA
TTACAAAATATTGAACATTTGGTCCAGAAGCTTAAACAACTAAACTCCACTCACGATGAA
GCCAGCACAGATTACATTGCATCACTCTGTGAGAACACAAACCCAGACCACAGATACATT
TCTGAGATATTGTTAGCTTCAGGTCTCCTCCTCAGAGACCTTGACTCCAGCCTCACAACC
TATCAGTTCCACCCGTCAGGGCACCCAATCAACCCTGAGTTATTCTTTGTTCTGGAGCAA
ACCAAGGGTAGCACTTTGATCTGCAAAGAAGGCTGCTCTGGAACAGTTTCCAATCTGAAG
CCTGACCAGGGAAAATTTCACCGTAAACTTATATTTGATGCTGTTAATGAGATTCTTGTG
GGAAAGTTAGCTCTGGCAGGGCCCTCTCCTGAACCATGGATAAAGCCTGATAAACTGGCA
AGGAAGACATTGAGTGCACAAAAGCTTCTAAAAGAATTGTGTTCAGAGATAGAGCAGCTT
CAAGCCATCAAATCAGAGTGCATCATAGAGGAGAAGGAGGATGATTTTAAAAGCATCTTA
TGGAAGGATGTAATGCATGGATCCGAGAGTTGGACAGATTTTTGTGGTGAGATTTCTGGG
GTAGTTTTGGATGTTGAACGTTTGATCTTCAAGGATTTGGTTGATGAGATTGTCATGGGT
GAGTCGACTAGTGCACGAGCCAATCCTGGTAGGCGTTGCAGGCGGCTGTTTGCAAAGTAG

Peptide Sequence

PEP ID

VIT_17s0000g05210.t01
PEP Infomation

pep chromosome:12X:17:5700375:5706514:1 gene:VIT_17s0000g05210 transcript:VIT_17s0000g05210.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAAKLLHSLTDDNPDLQKQIGCMAGIFQLFDHHHILTGRRISHKRLLPGNSYLNSSLETN
STNVGHRHTAAGKNSNKSVNEKQKFSTESSRVSFSSSSCSSSMSSLECNKTAQPEPCSFD
RIIFPETHSRDPAMNQLSASPQLGRQSLDLRDLVKDSMYREVRGLSVKTTTREEAVGHAV
KPKDSPRPSQPSKSMDGSYGVGTKGKQNVPVDLKESLRVLAKLREAPWYFNEARELPRSS
YEAKDGPLPSIPKDAPRFSYDGREINRLSFESQDTSKGTPKLKELPRLSLDSREGSMRGS
NFDSRSNSVLRNLQKGSANSKDNVPNLKQISESQKRPPSVVAKLMGLEALPDSISVHDSQ
MGLIRTCPIQDCDPFSRSPKTPDPSSRPIQMPYSPRSSWKEPTSPRWRNPDSVMKPISSS
RFPIEPAPWRQQDGSRGSLKPASRNIKAPARAPNSFPSVYSEIEKRLKDLEFKQSGKDLR
ALKQILEAMQAKGLLETRREEQPSNFGTKRDEPKYTSFDQKVRLASQRKTQHDTVCAATA
GGANSRRSFDSPIVIMKPAKLVEKSSIPASSVISIDGFSSFHKPQGGNFADNRKDSVNSQ
TAKVFTPKNSSRDHVTSSIDKRSNVRNSRAAQTPTRPQQLPKENTSSLVKSSGSVSPRLQ
QKKLELEKRSRLPSTSSELGKSRRQSHKMPTESSSPGGKCRPKSPNLQQSDDQLSEISSE
SRNLSYQGDDISVHSDSNMEVTSTEHSTEINGSRSPSMKAANCPTSGLLKKKSTSRLAED
VSLAELATIAPEQPSPVSVLDASVYIDDAPSPVKQTPTALKDNGSWNSSNNHDEEQWKLK
DDILSNSTGSGVTSEINRKKLQNIEHLVQKLKQLNSTHDEASTDYIASLCENTNPDHRYI
SEILLASGLLLRDLDSSLTTYQFHPSGHPINPELFFVLEQTKGSTLICKEGCSGTVSNLK
PDQGKFHRKLIFDAVNEILVGKLALAGPSPEPWIKPDKLARKTLSAQKLLKELCSEIEQL
QAIKSECIIEEKEDDFKSILWKDVMHGSESWTDFCGEISGVVLDVERLIFKDLVDEIVMG
ESTSARANPGRRCRRLFAK

Transcript Sequence

Transcript ID

VIT_17s0000g05210.t01
Transcript Infomation

cdna chromosome:12X:17:5700375:5706514:1 gene:VIT_17s0000g05210 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAAGAGAGAAGAGGGCTAGGGTTTAGGTATTTTTCTTGGCATCCCTTCAATTGACGTTTG
ACCTTAGAGGAAGAAATCCCTGATTTTCAACTGGGTCACAGGAGAATTTCTTAGATTCCT
CATAAATTGTGATGTTCCATCATTGGTTCTAAAATTTTTGGAGAGCCTTAAAGATTTGTC
TCATGGAAGTGGGGCCTGAAGTTCACTAGATTAGACACAGGATAATAGAGATACAGGAAG
TGAGGCCATATTATTGTGTAGTTGAAGAGAGGCGGTGGAGATGGCTGCAAAGCTTCTGCA
TTCCTTAACAGATGATAACCCAGATTTGCAGAAGCAAATTGGGTGCATGGCTGGGATCTT
TCAACTCTTTGATCATCACCATATCCTCACCGGAAGGCGCATCAGCCACAAGAGGCTTCT
TCCAGGTAATTCCTACCTCAACAGCAGCCTGGAAACGAATTCTACTAATGTAGGCCACCG
ACATACTGCAGCAGGAAAAAATTCAAACAAAAGTGTGAATGAGAAACAAAAATTCTCCAC
AGAATCATCCAGAGTTTCATTCTCATCTTCGTCTTGTTCATCTTCTATGTCCTCTCTCGA
ATGTAACAAAACAGCTCAACCAGAACCTTGTTCCTTTGACCGAATCATTTTTCCTGAAAC
TCACTCAAGGGATCCAGCCATGAACCAGTTAAGTGCCTCTCCACAATTAGGGCGGCAATC
GCTTGATCTTCGTGATTTGGTCAAGGATTCTATGTACAGAGAAGTACGAGGGCTGTCAGT
TAAGACTACAACCAGAGAAGAAGCTGTGGGCCATGCCGTGAAGCCTAAAGACTCTCCAAG
GCCTTCACAGCCATCCAAATCAATGGATGGATCTTATGGAGTTGGTACCAAAGGGAAGCA
AAATGTGCCTGTTGATCTCAAGGAGTCTCTTAGAGTTCTTGCCAAGCTTCGAGAAGCACC
TTGGTATTTCAATGAAGCTAGAGAACTTCCAAGATCATCATATGAAGCAAAAGATGGACC
TTTGCCTTCAATTCCAAAAGATGCTCCTCGGTTTTCTTATGATGGGAGGGAGATAAACCG
CTTATCCTTTGAATCACAAGATACCTCCAAAGGCACCCCAAAGCTGAAAGAACTACCAAG
ACTTTCATTGGACAGCAGAGAGGGTTCCATGCGGGGTTCGAACTTTGATTCAAGATCAAA
TTCCGTTTTGAGGAATTTGCAGAAGGGCAGTGCCAACTCTAAAGACAATGTCCCAAATTT
AAAGCAAATATCAGAGTCTCAGAAACGGCCTCCTAGCGTTGTTGCTAAGTTGATGGGCTT
GGAAGCTTTACCAGATTCCATATCAGTCCATGATAGTCAGATGGGGTTGATCAGAACCTG
CCCAATCCAGGATTGTGATCCCTTCTCAAGGTCACCTAAAACACCTGATCCAAGTAGTAG
GCCAATCCAGATGCCCTACTCCCCTAGAAGCTCATGGAAGGAACCAACTTCACCAAGGTG
GAGAAATCCAGATTCAGTCATGAAACCTATCTCAAGTTCAAGGTTTCCCATTGAACCAGC
ACCATGGAGACAGCAGGATGGAAGTCGGGGCTCTCTAAAACCAGCTTCTAGGAATATAAA
AGCTCCAGCAAGGGCACCAAATTCCTTCCCATCTGTGTATAGTGAGATTGAGAAAAGATT
GAAAGATCTTGAATTTAAACAATCTGGAAAGGATCTAAGAGCTCTTAAACAAATATTAGA
AGCAATGCAGGCAAAGGGACTCTTGGAGACCAGAAGAGAAGAGCAACCTTCCAACTTTGG
AACTAAAAGAGATGAGCCAAAATATACCAGCTTTGATCAGAAGGTAAGACTGGCAAGCCA
ACGAAAAACTCAACATGATACTGTTTGTGCTGCCACTGCTGGGGGGGCTAATTCTCGAAG
GAGTTTTGATTCCCCAATTGTGATCATGAAACCAGCCAAACTAGTTGAGAAATCTAGTAT
TCCTGCTTCCTCCGTAATTTCAATTGATGGTTTTTCCAGTTTCCATAAGCCTCAGGGTGG
CAACTTTGCAGATAACAGAAAGGATTCAGTTAATAGCCAAACAGCTAAAGTTTTTACTCC
TAAAAATAGTAGCAGAGATCATGTTACTAGTTCCATTGATAAGAGAAGCAATGTCAGAAA
CTCAAGAGCAGCACAAACTCCAACAAGGCCTCAACAGTTGCCTAAAGAAAATACCTCAAG
CTTGGTAAAGAGCTCAGGATCTGTAAGCCCAAGACTACAGCAAAAGAAGCTCGAGTTAGA
GAAGCGATCTCGACTGCCCAGCACTTCATCTGAATTGGGCAAATCAAGAAGGCAATCCCA
CAAGATGCCAACAGAATCAAGTTCGCCAGGAGGAAAATGCAGACCAAAATCTCCCAACTT
GCAGCAAAGTGATGACCAACTGAGTGAGATAAGTAGCGAATCAAGAAACTTGAGTTACCA
GGGAGATGACATTTCTGTGCATTCAGACAGCAACATGGAAGTCACCAGTACTGAACACTC
TACTGAGATCAATGGCAGCCGGAGTCCATCCATGAAGGCTGCCAATTGTCCAACTTCTGG
CTTATTAAAGAAAAAATCAACTTCAAGGTTGGCCGAAGATGTGTCATTGGCAGAACTTGC
TACAATTGCCCCCGAGCAGCCCAGCCCTGTCTCTGTTCTTGATGCTTCAGTGTACATAGA
TGATGCACCATCTCCTGTGAAGCAGACACCAACTGCTCTGAAAGATAATGGGAGTTGGAA
TTCCAGCAACAATCATGATGAAGAGCAATGGAAGCTGAAGGATGATATCTTATCTAACAG
CACAGGATCAGGCGTTACCTCTGAGATCAACCGCAAAAAATTACAAAATATTGAACATTT
GGTCCAGAAGCTTAAACAACTAAACTCCACTCACGATGAAGCCAGCACAGATTACATTGC
ATCACTCTGTGAGAACACAAACCCAGACCACAGATACATTTCTGAGATATTGTTAGCTTC
AGGTCTCCTCCTCAGAGACCTTGACTCCAGCCTCACAACCTATCAGTTCCACCCGTCAGG
GCACCCAATCAACCCTGAGTTATTCTTTGTTCTGGAGCAAACCAAGGGTAGCACTTTGAT
CTGCAAAGAAGGCTGCTCTGGAACAGTTTCCAATCTGAAGCCTGACCAGGGAAAATTTCA
CCGTAAACTTATATTTGATGCTGTTAATGAGATTCTTGTGGGAAAGTTAGCTCTGGCAGG
GCCCTCTCCTGAACCATGGATAAAGCCTGATAAACTGGCAAGGAAGACATTGAGTGCACA
AAAGCTTCTAAAAGAATTGTGTTCAGAGATAGAGCAGCTTCAAGCCATCAAATCAGAGTG
CATCATAGAGGAGAAGGAGGATGATTTTAAAAGCATCTTATGGAAGGATGTAATGCATGG
ATCCGAGAGTTGGACAGATTTTTGTGGTGAGATTTCTGGGGTAGTTTTGGATGTTGAACG
TTTGATCTTCAAGGATTTGGTTGATGAGATTGTCATGGGTGAGTCGACTAGTGCACGAGC
CAATCCTGGTAGGCGTTGCAGGCGGCTGTTTGCAAAGTAGCATTGTTCCACTCTTTCTTC
TTTTCAATCATCTCAACCTGTTCTGTTCTTTTTTGTTTGTAATTTTTTGTGCAAAAGCAT
AATCATTCATGGCTAAGAAATGCAG