Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g05200.t01
CDS Infomation

cds chromosome:12X:17:5688103:5694618:1 gene:VIT_17s0000g05200 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATTTGGAAGTGGCACCCTGTGATGCAAGCTCTAGTCTCTGTGCCCAAAAGAAGAGA
AAGAAGCACAAGCAAAGGCACAATTCCATGGAAAATAATCATACAGATCATGGTCATCGG
GAGGGTACTTCTTCAATGGAGAATAGACCCCTTGGTAGTGATTCACCTCAAGAGCCTCCA
GATAATAGCAGTGCAAAGCTGGATCTGGAAGCCCAACTTGATTCAGATGTGAAAAGGTTG
GAGAAAAACAAAGGCAGAAACAAGCATGAGAAGAGACGTTATTCTCTGAAAGATAAGGCT
TTAGGCTATGGTGCTTCAGAAGAGGGTACATCTTTAAAGAACCTATCAATGGAACAAAAG
TCTGCAGTTAACACACGCTTAAATTTGGAAAAGACTGAACCTAGTGCAGAAGTGGGTTCA
TCTCATAAAAAGACTAATAAGGGAAAAAGGTGGAAGAAGAGGCATAATGACTTCAAAATT
AATGGTACAGATCATGATCTTCGTGAGGGTGGTCATGTGCCTAGCACAGATTTAACAATT
ATCAACCATTCTGAAAAAGCGGATGTGAGTTTTATTTCATATCCTAGTTCAATAAAGAAC
CATGATGACAAAGCTGATGATGATGCTGCTTTGCTTGAAATGAAAAATGATGTTAATATC
AATAAGAGGAAGACAAAAATCAAAACCTATGGCAGGAGAAAGACAAGGTTCTCCAATTCC
TCAGAAAGTAATTTGGAATCTATGAAGGAAGATGGTATGAGCTCCTCAACGCAGGTTGTA
CAAAGTAATTCAACTGGGGTGTATTCTTTTAAACATTCACTTAATGACCCTGGATCTGTC
CTTTCAGGGAATAAGTTGGCAAGGCTCCGGGTGGAAGATGGTACCTCAGTACATCCTCTG
AAAGATATTGCAATGGAGGCAGCCTTTGTTAACTGTTCAGATAGTAAACCTACATCTGAG
AAAAGGAAGAAGAACATGGTGAGCAATTTAAAAGATGCTACTGATGAAACTAGTTTTGTA
AAGATGCCAGTTATCCCTGCTGGGAACTCTGAACCTGTAAATGGGGTTAAGCTAGATAAG
ATGAAGGGTGCATTGCAGGATGAGGCTGAGAACGTGGAGGAAGAAACTGAGGTGAAAGAA
ATAATTCCTTCTTCATCACATTTAGGTGCTATAAAAGATGATGTCAAAATAGTTAACAAA
GAGGAGAATCCTCCACATACATCACAATCTCTTCCAGAAAGAGCTGTTAGTTGCCATTCC
AGAAAGAAGCTCCTTATACTTGATGTGAATGGATTACTTGCTGATATTGTTCCATATTTT
GTTGAAGGATATAAACCGGACATAGTAGTTTCACGGAAATCAGTTTTTAAGAGACCCTTC
TGTGATGATTTTCTGCAGTTTTGCTTCGAAAGATTTGATGTTGGTGTTTGGTCATCAAGA
ACCAAGAAAAATGTGGATATGGTGCTTGAATTTCTTATGGCAGATGCCAGACACAAATTG
CTTTTTTGTTGGGATCAATCCCAGTGTACCAATACGGGATTTACTACTCATGAGAATCCG
CAGAAGCCCCTGCTTTTAAAAGAACTTAGAAAACTATGGGAAAAGCATGAGCCAAATCTT
CGATGGGAAAAGGGAGAGTATAATGAATCAAATACATTGTTGTTAGATGATTCACCATGC
AAGGCATTGCTGAATCCTGCATACACAGCAATCTTTCCCTATTCCTATGAGTACAAGGAT
GTTAAAGATAATATGTTAGCAACCGGAGGCAAGCTTCGGGTTTACCTTGAAGGGTTAGCC
ATGGCTGATAATGTTCAGAAGTATGTCAAACAAAATCCATTTGGTCAACGGGCTATCACA
AAATCGAGTGCAACCTGGACTTACTATAGTAAGGTTGTTAGCAAATACTCATACACACAA
GAGGAAGATGGCAGGAATTCTCATGCTTGTCGGCAGTGA

Peptide Sequence

PEP ID

VIT_17s0000g05200.t01
PEP Infomation

pep chromosome:12X:17:5688103:5694618:1 gene:VIT_17s0000g05200 transcript:VIT_17s0000g05200.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDLEVAPCDASSSLCAQKKRKKHKQRHNSMENNHTDHGHREGTSSMENRPLGSDSPQEPP
DNSSAKLDLEAQLDSDVKRLEKNKGRNKHEKRRYSLKDKALGYGASEEGTSLKNLSMEQK
SAVNTRLNLEKTEPSAEVGSSHKKTNKGKRWKKRHNDFKINGTDHDLREGGHVPSTDLTI
INHSEKADVSFISYPSSIKNHDDKADDDAALLEMKNDVNINKRKTKIKTYGRRKTRFSNS
SESNLESMKEDGMSSSTQVVQSNSTGVYSFKHSLNDPGSVLSGNKLARLRVEDGTSVHPL
KDIAMEAAFVNCSDSKPTSEKRKKNMVSNLKDATDETSFVKMPVIPAGNSEPVNGVKLDK
MKGALQDEAENVEEETEVKEIIPSSSHLGAIKDDVKIVNKEENPPHTSQSLPERAVSCHS
RKKLLILDVNGLLADIVPYFVEGYKPDIVVSRKSVFKRPFCDDFLQFCFERFDVGVWSSR
TKKNVDMVLEFLMADARHKLLFCWDQSQCTNTGFTTHENPQKPLLLKELRKLWEKHEPNL
RWEKGEYNESNTLLLDDSPCKALLNPAYTAIFPYSYEYKDVKDNMLATGGKLRVYLEGLA
MADNVQKYVKQNPFGQRAITKSSATWTYYSKVVSKYSYTQEEDGRNSHACRQ

Transcript Sequence

Transcript ID

VIT_17s0000g05200.t01
Transcript Infomation

cdna chromosome:12X:17:5688103:5694618:1 gene:VIT_17s0000g05200 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AATTAGAATAAACTGTTTACATCTTCTGAAACTAACCAGGAAGAGGCTACACGGAGAAAA
TAAATTGTGTGGAGATTGATCTAATGAATGGAAGTGTGATAATTTCTGAACAGAAATCCT
GAAACGTCTTGGAGAAACTAAACTGATTCAGTTGAGAATCCTGCCCCAGAAACTGATTCA
TATCTACAGTCTTCAGTCAGTATTTGCTTAGAGATGGATTTGGAAGTGGCACCCTGTGAT
GCAAGCTCTAGTCTCTGTGCCCAAAAGAAGAGAAAGAAGCACAAGCAAAGGCACAATTCC
ATGGAAAATAATCATACAGATCATGGTCATCGGGAGGGTACTTCTTCAATGGAGAATAGA
CCCCTTGGTAGTGATTCACCTCAAGAGCCTCCAGATAATAGCAGTGCAAAGCTGGATCTG
GAAGCCCAACTTGATTCAGATGTGAAAAGGTTGGAGAAAAACAAAGGCAGAAACAAGCAT
GAGAAGAGACGTTATTCTCTGAAAGATAAGGCTTTAGGCTATGGTGCTTCAGAAGAGGGT
ACATCTTTAAAGAACCTATCAATGGAACAAAAGTCTGCAGTTAACACACGCTTAAATTTG
GAAAAGACTGAACCTAGTGCAGAAGTGGGTTCATCTCATAAAAAGACTAATAAGGGAAAA
AGGTGGAAGAAGAGGCATAATGACTTCAAAATTAATGGTACAGATCATGATCTTCGTGAG
GGTGGTCATGTGCCTAGCACAGATTTAACAATTATCAACCATTCTGAAAAAGCGGATGTG
AGTTTTATTTCATATCCTAGTTCAATAAAGAACCATGATGACAAAGCTGATGATGATGCT
GCTTTGCTTGAAATGAAAAATGATGTTAATATCAATAAGAGGAAGACAAAAATCAAAACC
TATGGCAGGAGAAAGACAAGGTTCTCCAATTCCTCAGAAAGTAATTTGGAATCTATGAAG
GAAGATGGTATGAGCTCCTCAACGCAGGTTGTACAAAGTAATTCAACTGGGGTGTATTCT
TTTAAACATTCACTTAATGACCCTGGATCTGTCCTTTCAGGGAATAAGTTGGCAAGGCTC
CGGGTGGAAGATGGTACCTCAGTACATCCTCTGAAAGATATTGCAATGGAGGCAGCCTTT
GTTAACTGTTCAGATAGTAAACCTACATCTGAGAAAAGGAAGAAGAACATGGTGAGCAAT
TTAAAAGATGCTACTGATGAAACTAGTTTTGTAAAGATGCCAGTTATCCCTGCTGGGAAC
TCTGAACCTGTAAATGGGGTTAAGCTAGATAAGATGAAGGGTGCATTGCAGGATGAGGCT
GAGAACGTGGAGGAAGAAACTGAGGTGAAAGAAATAATTCCTTCTTCATCACATTTAGGT
GCTATAAAAGATGATGTCAAAATAGTTAACAAAGAGGAGAATCCTCCACATACATCACAA
TCTCTTCCAGAAAGAGCTGTTAGTTGCCATTCCAGAAAGAAGCTCCTTATACTTGATGTG
AATGGATTACTTGCTGATATTGTTCCATATTTTGTTGAAGGATATAAACCGGACATAGTA
GTTTCACGGAAATCAGTTTTTAAGAGACCCTTCTGTGATGATTTTCTGCAGTTTTGCTTC
GAAAGATTTGATGTTGGTGTTTGGTCATCAAGAACCAAGAAAAATGTGGATATGGTGCTT
GAATTTCTTATGGCAGATGCCAGACACAAATTGCTTTTTTGTTGGGATCAATCCCAGTGT
ACCAATACGGGATTTACTACTCATGAGAATCCGCAGAAGCCCCTGCTTTTAAAAGAACTT
AGAAAACTATGGGAAAAGCATGAGCCAAATCTTCGATGGGAAAAGGGAGAGTATAATGAA
TCAAATACATTGTTGTTAGATGATTCACCATGCAAGGCATTGCTGAATCCTGCATACACA
GCAATCTTTCCCTATTCCTATGAGTACAAGGATGTTAAAGATAATATGTTAGCAACCGGA
GGCAAGCTTCGGGTTTACCTTGAAGGGTTAGCCATGGCTGATAATGTTCAGAAGTATGTC
AAACAAAATCCATTTGGTCAACGGGCTATCACAAAATCGAGTGCAACCTGGACTTACTAT
AGTAAGGTTGTTAGCAAATACTCATACACACAAGAGGAAGATGGCAGGAATTCTCATGCT
TGTCGGCAGTGATGAGGTTCGTTGAATGACCTGATAAATGTATTCCCAATTTGGGTCTTT
TCTCAAATGGAAAGCTTCAATGGAAATGCTAGTAGGTGTTCTCACAACTGTTGAAAGATC
CCAGAATGATTCTGATGGAGATTCATATACAGTTGTTCTGATAATCAGAGTAGCTCTGCT
TCAATCTGAGAGTCGTATGTGTGCTGCAGCAGGTGCTACAGTTTTTGACTTTGAACTTGA
GATGAACAGACCCCTTTTTTGTACCAATGGATTATTCATTTTCTTGCTTCCATATGACAT
GATAATTTTAAGATGTGTGTTGCTCATTCCTAAATTAAGAATTATTTTTAGTTTGTTTCA
TGGTATGTGTACCAGATAATAGGACTGAGTCATGATTTGCTAAGTCGACAGCTCTTCTTG
TGATATGTAGAATCTATGGGTACGCCCAGAAAAAGAGAGGCAAAGAAAGGAAAAAGAAAG
AAAAAAAATGAAAAAAGGGTTTCAGCCCATATCTGATCTCCAAGCAGGTCTTCAATTATA
TGATATCTCTCAGGATTGTCTTTGTTTCTTAAC