Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g05090.t01
CDS Infomation

cds chromosome:12X:17:5578407:5580163:-1 gene:VIT_17s0000g05090 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTGGAGATCCTCGACGCCATTAACGTCTCTCCAACTCCGCAGGCTTCTTCTTCGCTGC
TTCTCATCATCATCATCATCATCATCATCTTCTTCTTCTTCTTCTTCTTCTTCTTTAGTA
CAGTCTTATTGCCTTAGCCCAACTCTCTCCCTAGATCCCTACTGTCTCTGTTCCTCACAA
CGCCACTTTGTCTCTCCTTCGTTTCCTCTCTCTAGGCGCTTCTCATCCCAACCAAACAAC
AGTGCCGATGATGATCACTCCCAAATCGCTCAATCTCTCTCTTCTGAACTCCTTAAGGAT
CCGGATTCAGAGCCTGTTCCCATTATCCAAAGGCTCCAGCTCAGCTTTTCTCACATTACT
CCCTCTCCTCCCCTTATCCTCCAAACACTTAATACTTCCCCTGATGCTGGCCGTACAGTT
TTAGGGTTTTACAAATGGCTCTCCTCGAACCCAAAATTTGTTCATTCTGATGAAACCATC
TCCTTCTTTGTCGATTATTTCGGTCGCCGGAAAGATTTCAAGGCCATCCACGAGGTACTA
ATGGATGGTCGCAACTTCGCCGGTGCTAAAACCCTAGAGTCGGCAATCGACCGGCTTGTC
CGGGCGGGCCGGGCCACGCAGGTGGTTTCCTTCTTTGATCGAATGGAGGTGGATTATGGA
TTCCGGAGAGACCGAGAATCGCTGACAATGGTTGTTTCGAAGCTTTGCGAACATGGATTT
GCCAGTCATGCGGAGAAAGTGGTGAAAAATGTGGCCAATGAGATTTTTCCTAATGAAACG
ATCTGTGATTTGCTTATTAAGGGGTGGTGTGTTGATGGGAAGCTTGATGAAGCTAGGAGG
TTGGCAGAGGAGATGTTTAGAGGAGGGTTTGAAATTGGTACAATGGCCTATAATTCGATT
CTGGATTGTATCTGTAAGCTTTGTAGGAAAAAGGATCCATTTCGTCTTGAATCCGAGGCA
GAGAAGATTTTGGTGGACATGGATGTTGCTGGGGTTCCACGCAACGTGGAAACTTTTAAT
GTTTTGATTACTAATTTATGTAAGATTAGGAAGACTGAGGATGCAATGAAGTTGTTTTAT
AGAATGGGTGAATGGGGATGTTACCCTAATGAAACCACATTTCTTGTTTTGACAAGGAGT
TTATATCAGGCAGCAAGGGTAGGAGAGGGTGATGAGATGATTGATAGGATGAAATCTGCT
GGGTTCGGGAATGCACTTGATAAGAAGGCATATTATGAGTTTATAAAAATTTTATGTGGG
ATTGAGAGGATCGATCATGCTATGAGTCTTTTTTCAAAGATGAAGGAGGACGGATGCAAA
CCCGGGATCAAGACATATGATTTATTGATGGGGAAGTTGTGTGCTCATGGTCGCCTTGAT
AAAGCAAATGCACTCTTCAGTGAAGCAGTGAATAGAGGGGTACCTGTGGAATCCAAGGCT
TATAAGTTGGATCCAAGATTTGTGAAGAAACCCACAGTGGCAAAGAAGGAGAAAAAACGA
GAAACATTGCCTGAGAAAATGGCCCGGAAGAGGAGGCGCCTTAGAAAAATCAGACTCAGT
TTTGTGAAGAAGCCTAAACGAATGCGGCGAGCATTTTGA

Peptide Sequence

PEP ID

VIT_17s0000g05090.t01
PEP Infomation

pep chromosome:12X:17:5578407:5580163:-1 gene:VIT_17s0000g05090 transcript:VIT_17s0000g05090.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MWRSSTPLTSLQLRRLLLRCFSSSSSSSSSSSSSSSSSLVQSYCLSPTLSLDPYCLCSSQ
RHFVSPSFPLSRRFSSQPNNSADDDHSQIAQSLSSELLKDPDSEPVPIIQRLQLSFSHIT
PSPPLILQTLNTSPDAGRTVLGFYKWLSSNPKFVHSDETISFFVDYFGRRKDFKAIHEVL
MDGRNFAGAKTLESAIDRLVRAGRATQVVSFFDRMEVDYGFRRDRESLTMVVSKLCEHGF
ASHAEKVVKNVANEIFPNETICDLLIKGWCVDGKLDEARRLAEEMFRGGFEIGTMAYNSI
LDCICKLCRKKDPFRLESEAEKILVDMDVAGVPRNVETFNVLITNLCKIRKTEDAMKLFY
RMGEWGCYPNETTFLVLTRSLYQAARVGEGDEMIDRMKSAGFGNALDKKAYYEFIKILCG
IERIDHAMSLFSKMKEDGCKPGIKTYDLLMGKLCAHGRLDKANALFSEAVNRGVPVESKA
YKLDPRFVKKPTVAKKEKKRETLPEKMARKRRRLRKIRLSFVKKPKRMRRAF

Transcript Sequence

Transcript ID

VIT_17s0000g05090.t01
Transcript Infomation

cdna chromosome:12X:17:5578407:5580163:-1 gene:VIT_17s0000g05090 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTGGAGATCCTCGACGCCATTAACGTCTCTCCAACTCCGCAGGCTTCTTCTTCGCTGC
TTCTCATCATCATCATCATCATCATCATCTTCTTCTTCTTCTTCTTCTTCTTCTTTAGTA
CAGTCTTATTGCCTTAGCCCAACTCTCTCCCTAGATCCCTACTGTCTCTGTTCCTCACAA
CGCCACTTTGTCTCTCCTTCGTTTCCTCTCTCTAGGCGCTTCTCATCCCAACCAAACAAC
AGTGCCGATGATGATCACTCCCAAATCGCTCAATCTCTCTCTTCTGAACTCCTTAAGGAT
CCGGATTCAGAGCCTGTTCCCATTATCCAAAGGCTCCAGCTCAGCTTTTCTCACATTACT
CCCTCTCCTCCCCTTATCCTCCAAACACTTAATACTTCCCCTGATGCTGGCCGTACAGTT
TTAGGGTTTTACAAATGGCTCTCCTCGAACCCAAAATTTGTTCATTCTGATGAAACCATC
TCCTTCTTTGTCGATTATTTCGGTCGCCGGAAAGATTTCAAGGCCATCCACGAGGTACTA
ATGGATGGTCGCAACTTCGCCGGTGCTAAAACCCTAGAGTCGGCAATCGACCGGCTTGTC
CGGGCGGGCCGGGCCACGCAGGTGGTTTCCTTCTTTGATCGAATGGAGGTGGATTATGGA
TTCCGGAGAGACCGAGAATCGCTGACAATGGTTGTTTCGAAGCTTTGCGAACATGGATTT
GCCAGTCATGCGGAGAAAGTGGTGAAAAATGTGGCCAATGAGATTTTTCCTAATGAAACG
ATCTGTGATTTGCTTATTAAGGGGTGGTGTGTTGATGGGAAGCTTGATGAAGCTAGGAGG
TTGGCAGAGGAGATGTTTAGAGGAGGGTTTGAAATTGGTACAATGGCCTATAATTCGATT
CTGGATTGTATCTGTAAGCTTTGTAGGAAAAAGGATCCATTTCGTCTTGAATCCGAGGCA
GAGAAGATTTTGGTGGACATGGATGTTGCTGGGGTTCCACGCAACGTGGAAACTTTTAAT
GTTTTGATTACTAATTTATGTAAGATTAGGAAGACTGAGGATGCAATGAAGTTGTTTTAT
AGAATGGGTGAATGGGGATGTTACCCTAATGAAACCACATTTCTTGTTTTGACAAGGAGT
TTATATCAGGCAGCAAGGGTAGGAGAGGGTGATGAGATGATTGATAGGATGAAATCTGCT
GGGTTCGGGAATGCACTTGATAAGAAGGCATATTATGAGTTTATAAAAATTTTATGTGGG
ATTGAGAGGATCGATCATGCTATGAGTCTTTTTTCAAAGATGAAGGAGGACGGATGCAAA
CCCGGGATCAAGACATATGATTTATTGATGGGGAAGTTGTGTGCTCATGGTCGCCTTGAT
AAAGCAAATGCACTCTTCAGTGAAGCAGTGAATAGAGGGGTACCTGTGGAATCCAAGGCT
TATAAGTTGGATCCAAGATTTGTGAAGAAACCCACAGTGGCAAAGAAGGAGAAAAAACGA
GAAACATTGCCTGAGAAAATGGCCCGGAAGAGGAGGCGCCTTAGAAAAATCAGACTCAGT
TTTGTGAAGAAGCCTAAACGAATGCGGCGAGCATTTTGATCTCATTAAAATTTTGCTTGG
GCTATGTTGGAAGTTTCAAAGGGTATGAATTTATCATTGTGATCATTTATTTTTTATGCT
TGTTGTTCTGATGCTACTGTTGGCAACACCTGAAATAAAACAGTGCTTAAAGTAGATTGA
TTTGACTCATAACTTGG