Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g04890.t01
CDS Infomation

cds chromosome:12X:17:5278368:5292271:-1 gene:VIT_17s0000g04890 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTGACCCTTGTTGTCGCTACCACCACCGACGCCGCCTCCCTTGGCCCTGCCTCCGCC
CTCTTGGCCATGCCCGGTTGGCTCCCTGGCCCCTCCCTCCAGGAAATACCCAGTTTCAAA
CACGGGGAAGTGAGGCTGTTAAAGCATGATAATAGCATTATAAGTGAGGATCACTTGGAC
AAGCGTTGGGAGGAGCTGACAGGGGAGGTTGTGGAGGAGGCCATATTTCTGAGCAAGCAC
ACTGCTGTTTCAAACCGCCCTTCGCTCACTGTTCACCCTATTGGTGTACCACATTTACGT
GATGATGAGGTTCCACCTCAAGGTGGAAAGCCTGGCTGGGCTGCTCCTCCAAGTCCTCGA
ATAGGACCATGGTTGAGGCTCTTGAAGACAATTGCTCAATCACAAAATCTTATTCCTGAA
TTTGAGGTGACTTTGGAGGCTACTCATCATGGACCTGAAATTAATTCGCCAACTATGTTT
GTAGAGATTGGTAGTACAGAAGAGCACTGGAAAAGGCAGGATGCTGCACAAGTGGTTGCT
TCACTAATCTGGGAAGGACTGGGCCTTGGGGGAGGAGTTAAAGTGGGAGACTGGAACAGA
AATGATGGTAATAACAAAGTTCTCCTTGGCATTGGAGGTGGACATTATGCACCTCGACAT
ATGGATATTGTTCGGAATGATGGTGTTTGGGTAGGCCATCTGCTTTCAGGATATGCCTTG
CCAATGGAAGATCCTGGGAAATCAAAAGCGCAGGGAAATGCAAAGGATGTTGGTGGAACT
TGGAAACATGCTATTAAAGTCGCATATGAGGTTACTAAATCATCTTTTCCAGGCGGAGAA
GTTCTAGCACACCTTGATCAGAAGAGTTTCAAAAGCTGGCAGAAAAATGCCATTACAGAG
TTCTTGACAGAGCAGAACATAAAGATTGGCAAGCCTGGTGACTTCTACTGA

Peptide Sequence

PEP ID

VIT_17s0000g04890.t01
PEP Infomation

pep chromosome:12X:17:5278368:5292271:-1 gene:VIT_17s0000g04890 transcript:VIT_17s0000g04890.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVTLVVATTTDAASLGPASALLAMPGWLPGPSLQEIPSFKHGEVRLLKHDNSIISEDHLD
KRWEELTGEVVEEAIFLSKHTAVSNRPSLTVHPIGVPHLRDDEVPPQGGKPGWAAPPSPR
IGPWLRLLKTIAQSQNLIPEFEVTLEATHHGPEINSPTMFVEIGSTEEHWKRQDAAQVVA
SLIWEGLGLGGGVKVGDWNRNDGNNKVLLGIGGGHYAPRHMDIVRNDGVWVGHLLSGYAL
PMEDPGKSKAQGNAKDVGGTWKHAIKVAYEVTKSSFPGGEVLAHLDQKSFKSWQKNAITE
FLTEQNIKIGKPGDFY

Transcript Sequence

Transcript ID

VIT_17s0000g04890.t01
Transcript Infomation

cdna chromosome:12X:17:5278368:5292271:-1 gene:VIT_17s0000g04890 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAGGAAGGCCACGACGTGTTCCGCAGTCACCACGAGAAGAAGAAAAGAAGGAGAAATGGT
GACCCTTGTTGTCGCTACCACCACCGACGCCGCCTCCCTTGGCCCTGCCTCCGCCCTCTT
GGCCATGCCCGGTTGGCTCCCTGGCCCCTCCCTCCAGGAAATACCCAGTTTCAAACACGG
GGAAGTGAGGCTGTTAAAGCATGATAATAGCATTATAAGTGAGGATCACTTGGACAAGCG
TTGGGAGGAGCTGACAGGGGAGGTTGTGGAGGAGGCCATATTTCTGAGCAAGCACACTGC
TGTTTCAAACCGCCCTTCGCTCACTGTTCACCCTATTGGTGTACCACATTTACGTGATGA
TGAGGTTCCACCTCAAGGTGGAAAGCCTGGCTGGGCTGCTCCTCCAAGTCCTCGAATAGG
ACCATGGTTGAGGCTCTTGAAGACAATTGCTCAATCACAAAATCTTATTCCTGAATTTGA
GGTGACTTTGGAGGCTACTCATCATGGACCTGAAATTAATTCGCCAACTATGTTTGTAGA
GATTGGTAGTACAGAAGAGCACTGGAAAAGGCAGGATGCTGCACAAGTGGTTGCTTCACT
AATCTGGGAAGGACTGGGCCTTGGGGGAGGAGTTAAAGTGGGAGACTGGAACAGAAATGA
TGGTAATAACAAAGTTCTCCTTGGCATTGGAGGTGGACATTATGCACCTCGACATATGGA
TATTGTTCGGAATGATGGTGTTTGGGTAGGCCATCTGCTTTCAGGATATGCCTTGCCAAT
GGAAGATCCTGGGAAATCAAAAGCGCAGGGAAATGCAAAGGATGTTGGTGGAACTTGGAA
ACATGCTATTAAAGTCGCATATGAGGTTACTAAATCATCTTTTCCAGGCGGAGAAGTTCT
AGCACACCTTGATCAGAAGAGTTTCAAAAGCTGGCAGAAAAATGCCATTACAGAGTTCTT
GACAGAGCAGAACATAAAGATTGGCAAGCCTGGTGACTTCTACTGATTGTCATGCTAGAA
ACGGCTGATAGATTATTTTATCAATTTTGTTTTACTACTATGCACCGAAGTTATATTTTG
ATTATCACAAGGATGATGGCTGAAGATTCTTCAAGTTACTTGTCTTAGATGCTCAAATCA
GGAATGATCTTCAGTTTCTACTCTGTAATTTAGTTACTTAAATTTCAAATTCAAGCATAG
AGAATAAATGTAATGCTACAAATTACGCAGAAGATGCATGCCTATTT