Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g04870.t01
CDS Infomation

cds chromosome:12X:17:5258929:5270236:1 gene:VIT_17s0000g04870 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTCGAACCACAACATTTCATGGATTTACACGACAACTCAAGTCTAGGAGACCCCAAA
TCCTGGCTTTCCGGCGATGACAACTCCTCTCCGATTCACCGCCGGACTCAGTCCTCCTTG
TCCTCCGCCTCCGCCGCCGGAACTGCTGCCAATGTTGACAGACTCCTCTTTAACGACCTC
GTCGAGATCGTCCCTCTCGTTCAGTCTCTCATTGATCGGAAGGCGAGCAGTTCGTTCACC
CGAGTTGGTGCAGTCACCTACACCAAGACGCCTTCAAGAGAATCTTTGTCCAGGAGGTTT
TCTGAACTGAAAGGGAGAAATACAGCTCAATCTATCCCCACAAAAAAGCGAAGGGACCAT
GGAGAAAAGGACCAGGGAAGGAATGGTAGCAATAACCAAGATGGATGTGCTGATGGCTTC
TCACTTTTCTCCTCTAGGGCTGTGGCATCAGAGAAGGACAAAGAAGAGCTTATTGCATTG
AGGGAACAAGTGGAGGATTTACAGAGGAAATTAGCAGAGAAAGATGAACTCCTGAAATCA
GCAGAGATTTCAAAGAGCCAGATGTCTGCTGTTCATGATAAACTAGATGAACTGAAGCAA
CAGGTAGCAGAAAAGGACTCTTTAATTAAATCTACTCAACTACAACTTTCTGATGCGAAG
ATCAAGCTTGCCGACAAACAAGCAGCCCTGGAAAAGATACAGTGGGAAGCAATGACATCC
AACAGGAAAGTGGAGAAGCTCCAGGAAGATCTAGAATCCATGCAGGCAGATATTTCATCA
TTTATGCTTTTATTTGAAGGCTTGACAAAGAATGATTCCACTATACGTTCCGAAAGCTAT
GATATCACGCCATATCATTTAGGTCATCTTCCTCCAATTGATGATCTGGATGAGATAGGG
GCACAGAAAATGGAGGAGGCAAGAAAAGCTTATGTTGCTGCAGTCGCAGCTGCCAAAGAA
AACCAAGATGAAGAATCTATTGCACTTGCAGCCAATTCAAGATTACATCTTCAATCATTT
GTTTTCAAAAACCATAATATGGATGTCAGCAGGGCAAGTCCAGATGTCAGGATTGCTGGA
GCTCCTGTTGGAGCAGTTGCTCACTAG

Peptide Sequence

PEP ID

VIT_17s0000g04870.t01
PEP Infomation

pep chromosome:12X:17:5258929:5270236:1 gene:VIT_17s0000g04870 transcript:VIT_17s0000g04870.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MFEPQHFMDLHDNSSLGDPKSWLSGDDNSSPIHRRTQSSLSSASAAGTAANVDRLLFNDL
VEIVPLVQSLIDRKASSSFTRVGAVTYTKTPSRESLSRRFSELKGRNTAQSIPTKKRRDH
GEKDQGRNGSNNQDGCADGFSLFSSRAVASEKDKEELIALREQVEDLQRKLAEKDELLKS
AEISKSQMSAVHDKLDELKQQVAEKDSLIKSTQLQLSDAKIKLADKQAALEKIQWEAMTS
NRKVEKLQEDLESMQADISSFMLLFEGLTKNDSTIRSESYDITPYHLGHLPPIDDLDEIG
AQKMEEARKAYVAAVAAAKENQDEESIALAANSRLHLQSFVFKNHNMDVSRASPDVRIAG
APVGAVAH

Transcript Sequence

Transcript ID

VIT_17s0000g04870.t01
Transcript Infomation

cdna chromosome:12X:17:5258929:5270236:1 gene:VIT_17s0000g04870 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAAATTAAATATAAGGAACAAGGAAAAGGAGAAGGAAATTCAAAAAACAAGTCTCCAGCG
AGTCTCGCCTCCTTCTTCAGCCAGTCTCACACAGACAGTCCTCGGAAGGATCAAATCCAT
CGTTGGATTGAGGAAAACAATGTTCGAACCACAACATTTCATGGATTTACACGACAACTC
AAGTCTAGGAGACCCCAAATCCTGGCTTTCCGGCGATGACAACTCCTCTCCGATTCACCG
CCGGACTCAGTCCTCCTTGTCCTCCGCCTCCGCCGCCGGAACTGCTGCCAATGTTGACAG
ACTCCTCTTTAACGACCTCGTCGAGATCGTCCCTCTCGTTCAGTCTCTCATTGATCGGAA
GGCGAGCAGTTCGTTCACCCGAGTTGGTGCAGTCACCTACACCAAGACGCCTTCAAGAGA
ATCTTTGTCCAGGAGGTTTTCTGAACTGAAAGGGAGAAATACAGCTCAATCTATCCCCAC
AAAAAAGCGAAGGGACCATGGAGAAAAGGACCAGGGAAGGAATGGTAGCAATAACCAAGA
TGGATGTGCTGATGGCTTCTCACTTTTCTCCTCTAGGGCTGTGGCATCAGAGAAGGACAA
AGAAGAGCTTATTGCATTGAGGGAACAAGTGGAGGATTTACAGAGGAAATTAGCAGAGAA
AGATGAACTCCTGAAATCAGCAGAGATTTCAAAGAGCCAGATGTCTGCTGTTCATGATAA
ACTAGATGAACTGAAGCAACAGGTAGCAGAAAAGGACTCTTTAATTAAATCTACTCAACT
ACAACTTTCTGATGCGAAGATCAAGCTTGCCGACAAACAAGCAGCCCTGGAAAAGATACA
GTGGGAAGCAATGACATCCAACAGGAAAGTGGAGAAGCTCCAGGAAGATCTAGAATCCAT
GCAGGCAGATATTTCATCATTTATGCTTTTATTTGAAGGCTTGACAAAGAATGATTCCAC
TATACGTTCCGAAAGCTATGATATCACGCCATATCATTTAGGTCATCTTCCTCCAATTGA
TGATCTGGATGAGATAGGGGCACAGAAAATGGAGGAGGCAAGAAAAGCTTATGTTGCTGC
AGTCGCAGCTGCCAAAGAAAACCAAGATGAAGAATCTATTGCACTTGCAGCCAATTCAAG
ATTACATCTTCAATCATTTGTTTTCAAAAACCATAATATGGATGTCAGCAGGGCAAGTCC
AGATGTCAGGATTGCTGGAGCTCCTGTTGGAGCAGTTGCTCACTAGCCCCTTCGCC