Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g04860.t01
CDS Infomation

cds chromosome:12X:17:5244356:5248673:-1 gene:VIT_17s0000g04860 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAAGGAAAGGCATGATAGATGGAGGAGAGCAGATAACACGGCATACTGCACCTTCC
ATTGAATCGGAAGAGAATGACAGAAGAACATACATTTATACTGATGAGAGTGCACTTTTG
GACTGTGAAATGCCAGAGCTGGTTGTTTTTCTTCAGGAGAGCAAGTACCAGGCTATCAAG
GACTTTTGTACTGATGGGGAAGTGCCTTTGCACGCAAAGTCATTGACAGAAAATTGTGGG
TTGGATCATAATATTGTCTCTTGTTTGCTGAACTCCGATGCAGACAGTAGTGAATTACCC
AAAGAAAGACAGAGCACACAGTCCTCCATTTCAAACAGTTCAAATTCTTTCATCCAGCAT
GATTGCAACGATTATGTTGTTGAGCAATGTGGTTCCAGGGACTTGGAGAAAAAAATTGAA
ATAGATTTTGATGCAAGAGATAGGGTTTCAATTGAAGGATACACTGGGAGGATTACACCT
GAAACACAGTGTCTGGTTGGAGAGGCGGGTAGCAATTGCTATCACTTTGAGTTATCCAAT
CCCATTGGACATGGATGTGGACAAAAATGTTATCAGGGTTCTAGTGAGGAAGCAGTCTTG
GCAAACTCTTTGCTATATCCTGCACCTGAAGAAATCAGCAGCAGGCGCCATGCAATTGAG
GCCTCTTTCAGAAGTGAGATCAAGAGTGAAAGCATCCCTCTAGATATTGATTCATCTATA
GCCACAATCAGCAGCAGAGAAAAAGAGCCGCGAGTAGTGGACTGTCAACAACATTTTGAA
ACCGAAAATTTGTTTAGACTTGATGACGGTGCTTCAGAAAGTTTAACAGTTTCAACTCAA
AGTCTTGTTATTCAAAATGGTCATGAAGAGTCCAGTTTCTCTACACCTGGCCCTCTTTCA
AACTCCATAGCATTCTCAGGACCAATATCATATTCTGGCAGCATGTCTCTCCGGTCAAAT
AGCAGCACACGGTCCTTCGCTTTTCCCATATTACAATCTGAATGGAATGGAAGCCCGGTG
AAAATGATAGAACCTGACAGAAGACACTCTAGGAAGTGCCGACCTTGGAAGTTACATTAT
CTCTGCTGTAAATTCTAA

Peptide Sequence

PEP ID

VIT_17s0000g04860.t01
PEP Infomation

pep chromosome:12X:17:5244356:5248673:-1 gene:VIT_17s0000g04860 transcript:VIT_17s0000g04860.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MARKGMIDGGEQITRHTAPSIESEENDRRTYIYTDESALLDCEMPELVVFLQESKYQAIK
DFCTDGEVPLHAKSLTENCGLDHNIVSCLLNSDADSSELPKERQSTQSSISNSSNSFIQH
DCNDYVVEQCGSRDLEKKIEIDFDARDRVSIEGYTGRITPETQCLVGEAGSNCYHFELSN
PIGHGCGQKCYQGSSEEAVLANSLLYPAPEEISSRRHAIEASFRSEIKSESIPLDIDSSI
ATISSREKEPRVVDCQQHFETENLFRLDDGASESLTVSTQSLVIQNGHEESSFSTPGPLS
NSIAFSGPISYSGSMSLRSNSSTRSFAFPILQSEWNGSPVKMIEPDRRHSRKCRPWKLHY
LCCKF

Transcript Sequence

Transcript ID

VIT_17s0000g04860.t01
Transcript Infomation

cdna chromosome:12X:17:5244356:5248673:-1 gene:VIT_17s0000g04860 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGAATTGCCCATTTATTATGGCTTTTTTTTTGGTGATTTTCAAGAGCTTTTTTGAGTGGC
GAAAAAGAGATAGGAAATCCCCTGCATGTTAGATGAACTCTGCCCACCAGGACTTGTAGC
TAGTATTTTAAATTCTCTGACAAATCTGTGGAGAGGTGAGGATTGAAGGCAAACAAGGAG
ATCAGCGTAGAAGACGAGATATCAGTCCCCATGATTTAAAGGGCCAAGATTATGAGGTGC
ATTTGGATCTGTTGCCCGATAATACATTGATTGGAGATGGAATGGTCAGGAATTCACTAG
GATTAAATAGTCTCATGGCAAGGAAAGGCATGATAGATGGAGGAGAGCAGATAACACGGC
ATACTGCACCTTCCATTGAATCGGAAGAGAATGACAGAAGAACATACATTTATACTGATG
AGAGTGCACTTTTGGACTGTGAAATGCCAGAGCTGGTTGTTTTTCTTCAGGAGAGCAAGT
ACCAGGCTATCAAGGACTTTTGTACTGATGGGGAAGTGCCTTTGCACGCAAAGTCATTGA
CAGAAAATTGTGGGTTGGATCATAATATTGTCTCTTGTTTGCTGAACTCCGATGCAGACA
GTAGTGAATTACCCAAAGAAAGACAGAGCACACAGTCCTCCATTTCAAACAGTTCAAATT
CTTTCATCCAGCATGATTGCAACGATTATGTTGTTGAGCAATGTGGTTCCAGGGACTTGG
AGAAAAAAATTGAAATAGATTTTGATGCAAGAGATAGGGTTTCAATTGAAGGATACACTG
GGAGGATTACACCTGAAACACAGTGTCTGGTTGGAGAGGCGGGTAGCAATTGCTATCACT
TTGAGTTATCCAATCCCATTGGACATGGATGTGGACAAAAATGTTATCAGGGTTCTAGTG
AGGAAGCAGTCTTGGCAAACTCTTTGCTATATCCTGCACCTGAAGAAATCAGCAGCAGGC
GCCATGCAATTGAGGCCTCTTTCAGAAGTGAGATCAAGAGTGAAAGCATCCCTCTAGATA
TTGATTCATCTATAGCCACAATCAGCAGCAGAGAAAAAGAGCCGCGAGTAGTGGACTGTC
AACAACATTTTGAAACCGAAAATTTGTTTAGACTTGATGACGGTGCTTCAGAAAGTTTAA
CAGTTTCAACTCAAAGTCTTGTTATTCAAAATGGTCATGAAGAGTCCAGTTTCTCTACAC
CTGGCCCTCTTTCAAACTCCATAGCATTCTCAGGACCAATATCATATTCTGGCAGCATGT
CTCTCCGGTCAAATAGCAGCACACGGTCCTTCGCTTTTCCCATATTACAATCTGAATGGA
ATGGAAGCCCGGTGAAAATGATAGAACCTGACAGAAGACACTCTAGGAAGTGCCGACCTT
GGAAGTTACATTATCTCTGCTGTAAATTCTAA