Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g04630.t01
CDS Infomation

cds chromosome:12X:17:4833384:4884118:-1 gene:VIT_17s0000g04630 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCTACTGTTAGCGTTGGGAGGGATCATCTGTTCGAAGCCCTGGGACGAACCTACGAA
CAAGAGGAATTTGAGGAGCTATGCTTCGAATTTGGAATTGAGCTGGACGATGTTACTACT
GAAAAGGAAATTATGAGGAAAGAAAAGCATTTGGAAGAAGAAGCATCTGCCAACGAAGAA
GTTATCTATAAAATCGAAGTGCCAGCAAATAGATATGACTTGCTGTGCCTTGAAGGGCTT
GTTCAAGCTCTGCGGATTTTTAAAAAGGCTGATCAGATACCTACTTATACATTGGCTGAT
GTTAGTAAGGAATCAATGCTTAAAATGCATGTAAAACCAGAGACCTCTTTAATTCGGCCA
TTTGTTGTATGTGCTGTTTTACGAGGTATAACTTTTGATGAATCAAGATACAACAGCTTT
ATTGATCTTCAAGATAGGCTTCATCAGAACATCTGCCGGCGAAGAACCTTGGTTGCAATT
GGAACTCATGACTTGGATACAATTCAAGGTCCTTTTACATATGAGGCTTTGCCCCCCTCA
GATATCAATTTTGTGCCATTGAAACAGGTTAAAAAGTTCAGAGCTGATGAGCTGATGGAG
TTTTACAAATCAGATTTAAAGCTGAAGAAATTCTTGCACATAATTGAGAATTCACCTGTG
TTCCCCGTTATATATGATCATAACAGGACCGTTCTGTCTTTACCCCCAATTATAAATGGT
GCCCATTCTGCAATCAATCTAAAGACAAAAAATGTGTTCATTGAATGTACAGCCACTGAT
TTGACAAAGGCCAAGATTGTTTTAAACACAATGGTGACAATGTTTTCAATGTACTGTGAA
AGAAAGTTTGAGGTCGAACCAGTTGAAGTGATATATCCTGATGGAAAGTCATGTCTTTAT
CCTGATCTGTCAGTCTACAGTATGGAAGTTCCTCTATCTTATATCATAGATACAGTTGGG
GTTTCTTTGGAGGCGGACGAGGTTACTAGTTTGTTAAATCGAATGCAATTGCATGCCAAG
CAGTCCTTATCAGAAGATAAAGAGTGCAAAATCATTGTCTCTGTTCCCCCAACAAGAAGT
GATGTTCTTCATCCATGCGATGTGGTTGAGGACGTTGGTATAGCATATGGGTATAATAAT
GTTCCAAGGAGGAAACTTGCATCGTTGAAGCCACTGCCATTGAACCAACTGAGTGATCTC
ATCAGATTGGAGATTGCAATGAATGGTTTTACAGAGATATTGACATGGATATTATGCTCT
TACAAAGAAAATTTCTCCATGTTGAACCGTAAAGATGACAAATCAACAGCAGTGATAATT
GGAAATCCTCGTTCTGCTGATTTTGAGGTTGTCCGGACAAGTCTTATGCCAGGTGCATTA
AAAACAGTTGCGCATAACAAAGACCACCCCAAGCCCATAAAGATATTTGAGGTTGGTGAT
ATAGCGGTATTGGATGAGGCAAAAGATGTTGGTGCAACAAATCGTCGTCAACTTGCAGCT
CTATATTGTGGTGCTAATTCTGGATTTGAGCTAATTCACTGCCTTGTCGACAGAATTATG
GAAATTATTGGATGTCCTTTTGTTGCAGTTGGAGACGATACTGGGTACTACATAAAGCTT
TCAAATGAACCCGAGTTTCTTCCAGGTCGACAAGCTAGCATCATTTACAGAGGGAAGCAC
ATAGGCACCTTTGGCATTGTGCACCCAGAGATCCTGAACAACTTCGACATTTCAGATCCA
TGCTCCTTTCTGGAACTCAACATGGAGAGCTTTTTGTAG

Peptide Sequence

PEP ID

VIT_17s0000g04630.t01
PEP Infomation

pep chromosome:12X:17:4833384:4884118:-1 gene:VIT_17s0000g04630 transcript:VIT_17s0000g04630.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPTVSVGRDHLFEALGRTYEQEEFEELCFEFGIELDDVTTEKEIMRKEKHLEEEASANEE
VIYKIEVPANRYDLLCLEGLVQALRIFKKADQIPTYTLADVSKESMLKMHVKPETSLIRP
FVVCAVLRGITFDESRYNSFIDLQDRLHQNICRRRTLVAIGTHDLDTIQGPFTYEALPPS
DINFVPLKQVKKFRADELMEFYKSDLKLKKFLHIIENSPVFPVIYDHNRTVLSLPPIING
AHSAINLKTKNVFIECTATDLTKAKIVLNTMVTMFSMYCERKFEVEPVEVIYPDGKSCLY
PDLSVYSMEVPLSYIIDTVGVSLEADEVTSLLNRMQLHAKQSLSEDKECKIIVSVPPTRS
DVLHPCDVVEDVGIAYGYNNVPRRKLASLKPLPLNQLSDLIRLEIAMNGFTEILTWILCS
YKENFSMLNRKDDKSTAVIIGNPRSADFEVVRTSLMPGALKTVAHNKDHPKPIKIFEVGD
IAVLDEAKDVGATNRRQLAALYCGANSGFELIHCLVDRIMEIIGCPFVAVGDDTGYYIKL
SNEPEFLPGRQASIIYRGKHIGTFGIVHPEILNNFDISDPCSFLELNMESFL

Transcript Sequence

Transcript ID

VIT_17s0000g04630.t01
Transcript Infomation

cdna chromosome:12X:17:4833384:4884118:-1 gene:VIT_17s0000g04630 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTACCATGCCTACTGTTAGCGTTGGGAGGGATCATCTGTTCGAAGCCCTGGGACGAACCT
ACGAACAAGAGGAATTTGAGGAGCTATGCTTCGAATTTGGAATTGAGCTGGACGATGTTA
CTACTGAAAAGGAAATTATGAGGAAAGAAAAGCATTTGGAAGAAGAAGCATCTGCCAACG
AAGAAGTTATCTATAAAATCGAAGTGCCAGCAAATAGATATGACTTGCTGTGCCTTGAAG
GGCTTGTTCAAGCTCTGCGGATTTTTAAAAAGGCTGATCAGATACCTACTTATACATTGG
CTGATGTTAGTAAGGAATCAATGCTTAAAATGCATGTAAAACCAGAGACCTCTTTAATTC
GGCCATTTGTTGTATGTGCTGTTTTACGAGGTATAACTTTTGATGAATCAAGATACAACA
GCTTTATTGATCTTCAAGATAGGCTTCATCAGAACATCTGCCGGCGAAGAACCTTGGTTG
CAATTGGAACTCATGACTTGGATACAATTCAAGGTCCTTTTACATATGAGGCTTTGCCCC
CCTCAGATATCAATTTTGTGCCATTGAAACAGGTTAAAAAGTTCAGAGCTGATGAGCTGA
TGGAGTTTTACAAATCAGATTTAAAGCTGAAGAAATTCTTGCACATAATTGAGAATTCAC
CTGTGTTCCCCGTTATATATGATCATAACAGGACCGTTCTGTCTTTACCCCCAATTATAA
ATGGTGCCCATTCTGCAATCAATCTAAAGACAAAAAATGTGTTCATTGAATGTACAGCCA
CTGATTTGACAAAGGCCAAGATTGTTTTAAACACAATGGTGACAATGTTTTCAATGTACT
GTGAAAGAAAGTTTGAGGTCGAACCAGTTGAAGTGATATATCCTGATGGAAAGTCATGTC
TTTATCCTGATCTGTCAGTCTACAGTATGGAAGTTCCTCTATCTTATATCATAGATACAG
TTGGGGTTTCTTTGGAGGCGGACGAGGTTACTAGTTTGTTAAATCGAATGCAATTGCATG
CCAAGCAGTCCTTATCAGAAGATAAAGAGTGCAAAATCATTGTCTCTGTTCCCCCAACAA
GAAGTGATGTTCTTCATCCATGCGATGTGGTTGAGGACGTTGGTATAGCATATGGGTATA
ATAATGTTCCAAGGAGGAAACTTGCATCGTTGAAGCCACTGCCATTGAACCAACTGAGTG
ATCTCATCAGATTGGAGATTGCAATGAATGGTTTTACAGAGATATTGACATGGATATTAT
GCTCTTACAAAGAAAATTTCTCCATGTTGAACCGTAAAGATGACAAATCAACAGCAGTGA
TAATTGGAAATCCTCGTTCTGCTGATTTTGAGGTTGTCCGGACAAGTCTTATGCCAGGTG
CATTAAAAACAGTTGCGCATAACAAAGACCACCCCAAGCCCATAAAGATATTTGAGGTTG
GTGATATAGCGGTATTGGATGAGGCAAAAGATGTTGGTGCAACAAATCGTCGTCAACTTG
CAGCTCTATATTGTGGTGCTAATTCTGGATTTGAGCTAATTCACTGCCTTGTCGACAGAA
TTATGGAAATTATTGGATGTCCTTTTGTTGCAGTTGGAGACGATACTGGGTACTACATAA
AGCTTTCAAATGAACCCGAGTTTCTTCCAGGTCGACAAGCTAGCATCATTTACAGAGGGA
AGCACATAGGCACCTTTGGCATTGTGCACCCAGAGATCCTGAACAACTTCGACATTTCAG
ATCCATGCTCCTTTCTGGAACTCAACATGGAGAGCTTTTTGTAGGATGGCACAGCTATAT
TGGCATTGGGTGCTAAAAGCCAACTGATCCAGCAGCCCGCTGCTGGGGAGGTAAATTATA
TGCTTATATTTGTAAGCAGTGACCCATCTAACCGAAAGGGAGGCAAATCATTTGTTTCTG
TCGTGGACTCTTAATTTTTCTGATAGGCAAATTTGTGGTCTATATTTTAACTACAATTTT
GTTAATCATTGGATTAAAGTGGTGAGTGTTTCTTCCCACTTTGGTCATCTTCAGCTGTAG
GTTGTTAGTTTGTCATTGCAATTTAGCTGGGCAATACTTATGCCACTTT