Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g04620.t01
CDS Infomation

cds chromosome:12X:17:4829683:4831828:-1 gene:VIT_17s0000g04620 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mediator of RNA polymerase II transcription subunit 11 [Source:UniProtKB/TrEMBL;Acc:D7SIR5]
Sequence

ATGGATTCGCAGACCCCAAACACTTCTCTGCAACGCCTTCAAAATGTTGAAAAGAGAATT
ATTAAGGTTTTGGAACTAGCCGGAGGAGTGATGGATGAACTCTGTAATCCTTCTGGTCCA
AGGAAGGAATTGCTCAGTATCCACTGTGGCGAGTTCATGCAATTAATCAAGGACATCCAA
ATGACCCTGCGGGATGAAATCAAAAGTGCATGTGAGTACCGTCCATTTGAGAAGTGCGAT
TACATTTCAAGAATATCTAATGAGATCTGTTGCAAGAAGCTGGAATATGTCATTTCACAG
TTGGATGGAATGAAAGAAACCATTGATGAATATCACGATGCAGTTTGA

Peptide Sequence

PEP ID

VIT_17s0000g04620.t01
PEP Infomation

pep chromosome:12X:17:4829683:4831828:-1 gene:VIT_17s0000g04620 transcript:VIT_17s0000g04620.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mediator of RNA polymerase II transcription subunit 11 [Source:UniProtKB/TrEMBL;Acc:D7SIR5]
Sequence

MDSQTPNTSLQRLQNVEKRIIKVLELAGGVMDELCNPSGPRKELLSIHCGEFMQLIKDIQ
MTLRDEIKSACEYRPFEKCDYISRISNEICCKKLEYVISQLDGMKETIDEYHDAV

Transcript Sequence

Transcript ID

VIT_17s0000g04620.t01
Transcript Infomation

cdna chromosome:12X:17:4829683:4831828:-1 gene:VIT_17s0000g04620 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mediator of RNA polymerase II transcription subunit 11 [Source:UniProtKB/TrEMBL;Acc:D7SIR5]
Sequence

ACTTTCTGATTGAGTGAATAACAATTGAAGCTGTAAGCCCGAAACCTCCCAACCCTAGAC
CCCTTCAACCTAAGAAAAAATACGCTCTGGTTCTTTGACGTCTCAAGTGGAAGCCCTACT
ACATGGATTCGCAGACCCCAAACACTTCTCTGCAACGCCTTCAAAATGTTGAAAAGAGAA
TTATTAAGGTTTTGGAACTAGCCGGAGGAGTGATGGATGAACTCTGTAATCCTTCTGGTC
CAAGGAAGGAATTGCTCAGTATCCACTGTGGCGAGTTCATGCAATTAATCAAGGACATCC
AAATGACCCTGCGGGATGAAATCAAAAGTGCATGTGAGTACCGTCCATTTGAGAAGTGCG
ATTACATTTCAAGAATATCTAATGAGATCTGTTGCAAGAAGCTGGAATATGTCATTTCAC
AGTTGGATGGAATGAAAGAAACCATTGATGAATATCACGATGCAGTTTGAAGGTTCTACT
GTAGCATTTGCAAGTTACTCTATTTCTCCCTTTGTATTAGATAAAAGAGTGTAATAATTT
TACAATTGTGAGATCCAATCCAGACTTGTACTTAGAGATACAATTATACTGAATTCAATA
CAAGAATCTGATGTCTTCCCTATGCCA