Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g04560.t01
CDS Infomation

cds chromosome:12X:17:4792628:4798711:1 gene:VIT_17s0000g04560 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAGGCAGCGAAAGCGAAGCCATTTTTGAATCTCTAAACCTCAATCCCCAGCTCTTC
ATCAATGAAGTCCTTAACCTAGTCGATGATTTGCTTGATGGAGCTTTTGATTTCTATCAA
CAGGAAGCATCGAATCTTTTGAGAACGGACGGAACCGATCGCTCTGGTGATATAAACAAG
GGTATTGGTTATATTCGTAATATGATTCAAGGAGTTTTGGATAAGCGGCTGGAGATGTGG
GAGAAGTATTGCCTAAGACACTGTTTTGCTGTTCCTGAGGGATTCTTGATGCCTAAAGCT
AGTGAAACACCTGGTGACAGTTCAATTAACAAAGATGTGCTGTCTGGTCTCGAGCTGGAT
GCGCAGTTGGATTCATTGAGGGATAAACTTACAGTGGTTGCAAAGGAATCTGCTGAGCTG
AACAGAGAGCTCCAAGCATTGGAAAGGCAGTCTGTCTTAAGCAATCAATGTACTGGGTCT
GTTAATGAGGCATTGCAGTTATATGAACAAAACAAAGTGCATGACATGTTTCAGGAGATG
ATGAGAACTGCATCAGAACTTCGTACTAAAATGGAGAAGATGAAGACCAAGAGGATGGAA
GGGATTGAACGTGTTAAAACAGAGAGGATATACAACCCAGACAGAGATTTGTCTATGAGG
AATCGTGACAAAGGCCTATTCAATGCAGAGTTGGAAGATCTTCAAGAATTTTTAGCCAAC
ATAAAGAACATGTGA

Peptide Sequence

PEP ID

VIT_17s0000g04560.t01
PEP Infomation

pep chromosome:12X:17:4792628:4798711:1 gene:VIT_17s0000g04560 transcript:VIT_17s0000g04560.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEGSESEAIFESLNLNPQLFINEVLNLVDDLLDGAFDFYQQEASNLLRTDGTDRSGDINK
GIGYIRNMIQGVLDKRLEMWEKYCLRHCFAVPEGFLMPKASETPGDSSINKDVLSGLELD
AQLDSLRDKLTVVAKESAELNRELQALERQSVLSNQCTGSVNEALQLYEQNKVHDMFQEM
MRTASELRTKMEKMKTKRMEGIERVKTERIYNPDRDLSMRNRDKGLFNAELEDLQEFLAN
IKNM

Transcript Sequence

Transcript ID

VIT_17s0000g04560.t01
Transcript Infomation

cdna chromosome:12X:17:4792628:4798711:1 gene:VIT_17s0000g04560 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAGCCATTCTCTCCCATTCAAATTTTCTTCTATTTTGAAGTTTTTCTCTTGGCGGGAAAG
AACTTCCAACTTTCCTCTCTCTTCTAGAGTTAGGTTTTTGGGAAATGGAAGGCAGCGAAA
GCGAAGCCATTTTTGAATCTCTAAACCTCAATCCCCAGCTCTTCATCAATGAAGTCCTTA
ACCTAGTCGATGATTTGCTTGATGGAGCTTTTGATTTCTATCAACAGGAAGCATCGAATC
TTTTGAGAACGGACGGAACCGATCGCTCTGGTGATATAAACAAGGGTATTGGTTATATTC
GTAATATGATTCAAGGAGTTTTGGATAAGCGGCTGGAGATGTGGGAGAAGTATTGCCTAA
GACACTGTTTTGCTGTTCCTGAGGGATTCTTGATGCCTAAAGCTAGTGAAACACCTGGTG
ACAGTTCAATTAACAAAGATGTGCTGTCTGGTCTCGAGCTGGATGCGCAGTTGGATTCAT
TGAGGGATAAACTTACAGTGGTTGCAAAGGAATCTGCTGAGCTGAACAGAGAGCTCCAAG
CATTGGAAAGGCAGTCTGTCTTAAGCAATCAATGTACTGGGTCTGTTAATGAGGCATTGC
AGTTATATGAACAAAACAAAGTGCATGACATGTTTCAGGAGATGATGAGAACTGCATCAG
AACTTCGTACTAAAATGGAGAAGATGAAGACCAAGAGGATGGAAGGGATTGAACGTGTTA
AAACAGAGAGGATATACAACCCAGACAGAGATTTGTCTATGAGGAATCGTGACAAAGGCC
TATTCAATGCAGAGTTGGAAGATCTTCAAGAATTTTTAGCCAACATAAAGAACATGTGAG
TTAAAATATTGTTACGTCAATCTTGTGGCACAGGAGTGATACATTATGCTTGCTGTAGAT
AATTACTAGTAAGTTTTCCTTACATGCTGTGTAATGGATAGTTATTGGGCCTTATTATAT
CATCTAGAGTTCTGGTGTTTCCTTTCTACAATATGAAAAATATAATATCC