Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g04550.t01
CDS Infomation

cds chromosome:12X:17:4784875:4791493:-1 gene:VIT_17s0000g04550 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGAAGAAGAGCACATCCATACAAGCCTTATACGACCTCTGCAAAAAGACCTTTTCT
CCTTCAGGAACACCTCCTCCTTCTCAAGCTATTCACAAACTCTCCTCTCTTTTGGACACA
ATTGGTCCTGCTGATGTTGGGCTGAGAGAGGACAATCCAGAGGATGACCGAGGGCATGGC
ATCTTTGGACTTAATGGATTTAATAGGATAGCTCGATGGGCTCAACCAATAACATACTTG
GATATCTTTGAATGTAATAGTTTTACGATGTGCATATTCTGCTTTCCTACTTCTTCAGTT
ATTCCACTTCATGACCATCCTGGGATGACTGTTTTGAGCAAAGTTCTATATGGCTCCTTG
CATGTGAAAGCTTATGATTGGGTTGAGCCTGCCCGCATCCAGAAAGGCAAGGGACCAGGT
TACTTTACAGTAAGATTGGCAAAGTTGGCTGTGGATAAAGTTCTAACAGCACCAGTTGGG
ACCTCGATTCTATATCCTAAGAGTGGGGGGAATCTGCATTATTTCACTGCAATCACTCCT
TGTGCTGTGCTTGACGTTCTTGCACCTCCTTACCAAGAAGCTTCTGGCAGGAAATGTACT
TACTACCATGACTACCCTTATTCCAGCTTCTCAACTGGAAATGAAGCTGAGATAAGTGGA
AAAGAAGAGGACTATGCATGGCTTGCAGAGATAGAAACACCAGATGATCTTTACATGCGC
CAGGGTGTATATGCTGGGCCAGCTATTCAGGTTTAG

Peptide Sequence

PEP ID

VIT_17s0000g04550.t01
PEP Infomation

pep chromosome:12X:17:4784875:4791493:-1 gene:VIT_17s0000g04550 transcript:VIT_17s0000g04550.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAKKSTSIQALYDLCKKTFSPSGTPPPSQAIHKLSSLLDTIGPADVGLREDNPEDDRGHG
IFGLNGFNRIARWAQPITYLDIFECNSFTMCIFCFPTSSVIPLHDHPGMTVLSKVLYGSL
HVKAYDWVEPARIQKGKGPGYFTVRLAKLAVDKVLTAPVGTSILYPKSGGNLHYFTAITP
CAVLDVLAPPYQEASGRKCTYYHDYPYSSFSTGNEAEISGKEEDYAWLAEIETPDDLYMR
QGVYAGPAIQV

Transcript Sequence

Transcript ID

VIT_17s0000g04550.t01
Transcript Infomation

cdna chromosome:12X:17:4784875:4791493:-1 gene:VIT_17s0000g04550 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAAAAAAGGGAAAGCCCATTTTCTGTGAAAATGGCGAAGAAGAGCACATCCATACAAGCC
TTATACGACCTCTGCAAAAAGACCTTTTCTCCTTCAGGAACACCTCCTCCTTCTCAAGCT
ATTCACAAACTCTCCTCTCTTTTGGACACAATTGGTCCTGCTGATGTTGGGCTGAGAGAG
GACAATCCAGAGGATGACCGAGGGCATGGCATCTTTGGACTTAATGGATTTAATAGGATA
GCTCGATGGGCTCAACCAATAACATACTTGGATATCTTTGAATGTAATAGTTTTACGATG
TGCATATTCTGCTTTCCTACTTCTTCAGTTATTCCACTTCATGACCATCCTGGGATGACT
GTTTTGAGCAAAGTTCTATATGGCTCCTTGCATGTGAAAGCTTATGATTGGGTTGAGCCT
GCCCGCATCCAGAAAGGCAAGGGACCAGGTTACTTTACAGTAAGATTGGCAAAGTTGGCT
GTGGATAAAGTTCTAACAGCACCAGTTGGGACCTCGATTCTATATCCTAAGAGTGGGGGG
AATCTGCATTATTTCACTGCAATCACTCCTTGTGCTGTGCTTGACGTTCTTGCACCTCCT
TACCAAGAAGCTTCTGGCAGGAAATGTACTTACTACCATGACTACCCTTATTCCAGCTTC
TCAACTGGAAATGAAGCTGAGATAAGTGGAAAAGAAGAGGACTATGCATGGCTTGCAGAG
ATAGAAACACCAGATGATCTTTACATGCGCCAGGGTGTATATGCTGGGCCAGCTATTCAG
GTTTAGCGCACAATTATCTTTGTGTCTGAACTGATCCCCGGAACATATTTGATCACAGTG
ACCTGACATTCATGAAAGGAGGTGCTTTATAATCGAGTTCGCCTTCGACCAACAAACATA
TTTGCAACAAGTTGTGTTGTGTGTGGTTTATAGTTCTATTGAGGTTA