Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g04540.t01
CDS Infomation

cds chromosome:12X:17:4778501:4784046:1 gene:VIT_17s0000g04540 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTCTTGCTCCTACCTCTTCCTTCTCTCTTCCCTCCAGGTCCTCCATTGCTCATCCG
CCTCGCCGCCCTTTCACCGTCCGGTGTTCCGTGGCTGTCGCGCCGGCGGCCGCCAGGGCC
TCCAAGGAGCACCTTGTGAAGTCGGTGAAAGCGAGGCAGATCATCGATAGCAGAGGCAAT
CCGACGGTGGAAGTTGATCTGGTCACCGATAATCTGTACCGATCCGCCGTCCCCAGTGGG
GCCTCCACTGGGATCTACGAGGCTTTGGAGCTCAGAGACGGTGATAAGAATGTTTATGGC
GGTAAAGGTGTTCTCAATGCTGTCAGCAACATCAATCACCTCTTGGCTCCCAAACTCGTT
GGTCTTGATGTCAGGAATCAAGCCGAAGTTGATGCCATCATGCTAGAGTTTGATGGAACC
CCAAATAAGTCAAAACTTGGGGCTAATGCAACACTGGGAGTGTCTCTCAGCGTGTGTAGA
GCAGGTGCAGGAGCAAAGGGAGTGCCATTATACAAGCATATCCAAGAATTGTCTGGAACC
AAGGAGCTTGTTATGCCTGTTCCTGCTTTCAATGTGATAAATGGTGGCAGCCATGCTGGA
AATAATCTAGCTATGCAAGAATTCATGATCTTACCAGTGGGTGCAACCTCGTTTGCCGAG
GCCCTCCGCATGGGCAGTGAAGTTTATCATACACTGAAGGGAATTATCAAGGCAAAATAT
GGACAAGATGCATGCAATGTTGGGGATGAGGGGGGATTTGCTCCCAATGTTCAGGATAAT
AGGGAGGGGTTGGTTCTGCTTATGGATGCAATTGAAAAGGCTGGTTACACAGGCAAGATC
AAAATAGGAATGGATGTTGCAGCTTCAGAGTTCTTCACTAAAGATGGGAAATATGATTTG
AATTTTAAGAAACAACCAAATGATGGAGCTCACGTTCGCTCAGCTCAGAGCCTTTGTGAA
CTCTACAAGGAGTTTGTCAAAGATTTCCCTATTGTGTCTATTGAAGATCCCTTTGACCAA
GATGATTGGAGTTCATGGGCTTCATTACAGTCCTCAGTTGATATCCAACTTGTAGGAGAT
GATTTGTTGGTAACAAATCCAAAGAGAATAGCTGAAGCAATAGAGAAGAAAGCTTGCAAT
GCTTTGCTATTAAAGGTTAACCAGATAGGCACCGTGACTGAATCCATTCAAGCTGCACTA
GACTCTAAAGCTGCAGGATGGGGTGTGATGGTCAGTCACCGGAGTGGTGAAACAGAAGAT
AACTTCATAGCTGATCTTTCTGTGGGCTTGGCAAGTGGACAGATCAAGACTGGCGCACCT
TGCCGAAGTGAGCGGTTGGCCAAATATAATCAGCTTTTGCGCATTGAAGAGGAACTTGGA
CATGTGCGTTATGCTGGTGAAGCTTTCAGATCACCCTAG

Peptide Sequence

PEP ID

VIT_17s0000g04540.t01
PEP Infomation

pep chromosome:12X:17:4778501:4784046:1 gene:VIT_17s0000g04540 transcript:VIT_17s0000g04540.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MALAPTSSFSLPSRSSIAHPPRRPFTVRCSVAVAPAAARASKEHLVKSVKARQIIDSRGN
PTVEVDLVTDNLYRSAVPSGASTGIYEALELRDGDKNVYGGKGVLNAVSNINHLLAPKLV
GLDVRNQAEVDAIMLEFDGTPNKSKLGANATLGVSLSVCRAGAGAKGVPLYKHIQELSGT
KELVMPVPAFNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHTLKGIIKAKY
GQDACNVGDEGGFAPNVQDNREGLVLLMDAIEKAGYTGKIKIGMDVAASEFFTKDGKYDL
NFKKQPNDGAHVRSAQSLCELYKEFVKDFPIVSIEDPFDQDDWSSWASLQSSVDIQLVGD
DLLVTNPKRIAEAIEKKACNALLLKVNQIGTVTESIQAALDSKAAGWGVMVSHRSGETED
NFIADLSVGLASGQIKTGAPCRSERLAKYNQLLRIEEELGHVRYAGEAFRSP

Transcript Sequence

Transcript ID

VIT_17s0000g04540.t01
Transcript Infomation

cdna chromosome:12X:17:4778501:4784046:1 gene:VIT_17s0000g04540 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTTTTTAAATATTAAAAAAAGAAAAAGAAAAAGGAAACACCAAATGGTGGGAGCAGCCAC
GAGAGAGAAGGTCGCCACATGCACAGCTACCTGGCAGGAGTGTGGGAATTTCTTTCACTT
AACGTCCCTCCCCAACAACCCCCACCAAAACTCCACATTTGAACACTGCTTTCATCGCCC
TCCAGCGGACTTCTCCACGTTCCCTCTTCGCTCTTCCCCTATTTATATTCCACCCACCTC
CTTCACCCTAACTTTCCCTTCTACTTTCTCGGTTTCTCCCTCCCCAAACTCGTGATGGCT
CTTGCTCCTACCTCTTCCTTCTCTCTTCCCTCCAGGTCCTCCATTGCTCATCCGCCTCGC
CGCCCTTTCACCGTCCGGTGTTCCGTGGCTGTCGCGCCGGCGGCCGCCAGGGCCTCCAAG
GAGCACCTTGTGAAGTCGGTGAAAGCGAGGCAGATCATCGATAGCAGAGGCAATCCGACG
GTGGAAGTTGATCTGGTCACCGATAATCTGTACCGATCCGCCGTCCCCAGTGGGGCCTCC
ACTGGGATCTACGAGGCTTTGGAGCTCAGAGACGGTGATAAGAATGTTTATGGCGGTAAA
GGTGTTCTCAATGCTGTCAGCAACATCAATCACCTCTTGGCTCCCAAACTCGTTGGTCTT
GATGTCAGGAATCAAGCCGAAGTTGATGCCATCATGCTAGAGTTTGATGGAACCCCAAAT
AAGTCAAAACTTGGGGCTAATGCAACACTGGGAGTGTCTCTCAGCGTGTGTAGAGCAGGT
GCAGGAGCAAAGGGAGTGCCATTATACAAGCATATCCAAGAATTGTCTGGAACCAAGGAG
CTTGTTATGCCTGTTCCTGCTTTCAATGTGATAAATGGTGGCAGCCATGCTGGAAATAAT
CTAGCTATGCAAGAATTCATGATCTTACCAGTGGGTGCAACCTCGTTTGCCGAGGCCCTC
CGCATGGGCAGTGAAGTTTATCATACACTGAAGGGAATTATCAAGGCAAAATATGGACAA
GATGCATGCAATGTTGGGGATGAGGGGGGATTTGCTCCCAATGTTCAGGATAATAGGGAG
GGGTTGGTTCTGCTTATGGATGCAATTGAAAAGGCTGGTTACACAGGCAAGATCAAAATA
GGAATGGATGTTGCAGCTTCAGAGTTCTTCACTAAAGATGGGAAATATGATTTGAATTTT
AAGAAACAACCAAATGATGGAGCTCACGTTCGCTCAGCTCAGAGCCTTTGTGAACTCTAC
AAGGAGTTTGTCAAAGATTTCCCTATTGTGTCTATTGAAGATCCCTTTGACCAAGATGAT
TGGAGTTCATGGGCTTCATTACAGTCCTCAGTTGATATCCAACTTGTAGGAGATGATTTG
TTGGTAACAAATCCAAAGAGAATAGCTGAAGCAATAGAGAAGAAAGCTTGCAATGCTTTG
CTATTAAAGGTTAACCAGATAGGCACCGTGACTGAATCCATTCAAGCTGCACTAGACTCT
AAAGCTGCAGGATGGGGTGTGATGGTCAGTCACCGGAGTGGTGAAACAGAAGATAACTTC
ATAGCTGATCTTTCTGTGGGCTTGGCAAGTGGACAGATCAAGACTGGCGCACCTTGCCGA
AGTGAGCGGTTGGCCAAATATAATCAGCTTTTGCGCATTGAAGAGGAACTTGGACATGTG
CGTTATGCTGGTGAAGCTTTCAGATCACCCTAGGAAAAAAAGAAAGCTCCGGCTGCTTTA
TTCGCAATAAGTACTGGATTAAATACACCATAAAACAAGTTGAGCTCCTAGTAAAACCAG
GTTTGTGAGAAAGTAGGAAAGGTTTTTAGGTAACCAATCTGCTGAGATGTCATTTAAAGC
ACCAATGCTAATGAGCTCATTTTTTATTGAAACAATTAGAGTGATCAAATAAGGCAGTTT
TGCTTTGGAACTGTCAG