Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g04380.t01
CDS Infomation

cds chromosome:12X:17:4578143:4582285:-1 gene:VIT_17s0000g04380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTATCACCTTGTTGCTTCAGTTAATCATCTCCTTACTATGCCTAAAAGAAGCTTCA
GCATCTCCATCTTTGGCAAAGCAAGGCTGTGTAGCTCACTGTGGCGATGTTTCCATTCCC
TACCCGTTTGGCATCGGGACAGGTTGCTACTTCAACGATTATTTCTCAATCAACTGCAAC
GATTCTTCTACTCCTCCGAAGCCCTTCTTGAATCACTCTAAACTCAACCTGGAGCTGCTC
AATGTATCGCTGGAATACAAAACAGTGATGGTAAACAGTCCCATAACCCCCCTATGTGGA
GGTAATGGAACATGGAGAACCACTGATGTCGGTGGAAGGCCCTTCCGTTTCTCCAGGGTT
CATAACATATTCATGGTGGTGGGATGTGACACCAACGCTGTCCTCATGACCGATGATCAA
GAAGAAATCTTAGCGGGTTGCACATCCAATTGTAATAGCGGTATTACTAGTACTGGTACA
GGTTGCTATGGCATCCAGTGTTGCCAAACCACAATTCCGTACAGTAATCAATCCACTCAT
CTTGGTATGTACCAAGTGAAATATATCAAGACAAGTGGGGATTGCTCATATGCCTTCTTG
GGCGTTAGGGACTGGTTCGCCAACAACATCTCCAATCCAGCTATTAGTACCAATTCCGGC
TATGCTCCGTTGGTCATGTTCTGGGAGATGGAAACTGGCTCATTAGGACGCTGTTACAGT
CTAAATCTTGACTGGCAGTCTGAAACAGCTATCGATAGTTGCAGCTGTGTGAATAGATAC
GAAGGGAACCCTTATCTTCCCAATGGATGTCAAGTGGTCGAAGCTTGTGCCAACTGCAGC
ATTCTCGACTGTGGCATGATAGGGGCTGAATATCATTGCTTTCCCAGCAACAGAAGGGCG
AAGGAGCTAAAAGCTATGATTTTAGGTCTTGGTATAGGTGGAGGGTCATTGCTTCTACTC
GTTGGAAGTTTTGGACTATACAAAGGAGTCAAAAAGAGAAGGGAAATCATTCGCAAACAA
AAATTCTTTAAACGAAATGGCGGTCTATTATTACAACAACAGTTATCTTCTATTGAAACT
ATTGAAAAAACAAAAATTTTCACATTTAAGGAGTTAGAAATGGCAACTGACAACTTCAAC
AAGAGTCGAATTCTTGGTCAAGGAGGTCAAGGTACAGTTTATAAAGGAATGTTAAATGAT
GGAAGAATTATAGCAGTTAAAAGATCAAAAATAATATATGAAAGTCAACTGGAGCAATTC
ATCAATGAGATTATGATTCTTTCTCAAATCAACCATAGAAATATACTTGGGTTGTTAGGA
TGTTGTTTAGAGACAGAAGTACCTCTATTAGTTTATGAGTTCATCTCCAATGGAACTTTA
TTTCAACTTATCCATGATCAAAACAATGAGTTCCCATTCTCATGGCATATGCGTTTGCAA
ATTGCTTCAGAGGCAGCAGGAGCTCTTGCTTACTTGCATTCATCATCTTCCATGCCCATT
TATCATAGAGACATCAAGTCAACTAATATTCTTATAGATGAGAAGTATAGAGCAAAGGTT
TCAGATTTTGGTACATCAAGGTCCATTTCCATTGAGCAAACTCATTTAACTACTCACGTG
AAAGGGACTTTTGGTTACTTCGATCCGGAATATTTTCAATCAGGTCGATTCACTGAGAAG
AGTGATGTATACAGTTTTGGAGTTGTTTTGGTTGAACTTTTAACAGGGAAAAAACCTGTT
TCTTGGACAACTCTTGAAGAAGAAAAGAGTTTGGTGGCACGATTTATTTTATCATTGGAG
AAGGAGAGTCATCTATATGATATTCTTGATGATCGAGTTAGGAAAGAAGGAGAGAAAGAG
AGGATAATTGCAGTAGCCAACCTTGCAAAGCGGTGCTTGAACTTGAATGGCAAGAAAAGG
CCGACAATGAAAGAAGTAACATTTGAGTTAGAGTATATTAGAATGTCTTCTTTGCCTATA
AATTCTCAACAATATATTCTTAATGAGGATGAATACGGTATTGGGGAAAGAATGAGGCCC
TTGGATAGTGCTACAACTTCTATTTCAATAGCCTCAAATTTGAGTTATAGGAAATCATAT
TCCTCATCATCTAATGTTCAACCATAA

Peptide Sequence

PEP ID

VIT_17s0000g04380.t01
PEP Infomation

pep chromosome:12X:17:4578143:4582285:-1 gene:VIT_17s0000g04380 transcript:VIT_17s0000g04380.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSITLLLQLIISLLCLKEASASPSLAKQGCVAHCGDVSIPYPFGIGTGCYFNDYFSINCN
DSSTPPKPFLNHSKLNLELLNVSLEYKTVMVNSPITPLCGGNGTWRTTDVGGRPFRFSRV
HNIFMVVGCDTNAVLMTDDQEEILAGCTSNCNSGITSTGTGCYGIQCCQTTIPYSNQSTH
LGMYQVKYIKTSGDCSYAFLGVRDWFANNISNPAISTNSGYAPLVMFWEMETGSLGRCYS
LNLDWQSETAIDSCSCVNRYEGNPYLPNGCQVVEACANCSILDCGMIGAEYHCFPSNRRA
KELKAMILGLGIGGGSLLLLVGSFGLYKGVKKRREIIRKQKFFKRNGGLLLQQQLSSIET
IEKTKIFTFKELEMATDNFNKSRILGQGGQGTVYKGMLNDGRIIAVKRSKIIYESQLEQF
INEIMILSQINHRNILGLLGCCLETEVPLLVYEFISNGTLFQLIHDQNNEFPFSWHMRLQ
IASEAAGALAYLHSSSSMPIYHRDIKSTNILIDEKYRAKVSDFGTSRSISIEQTHLTTHV
KGTFGYFDPEYFQSGRFTEKSDVYSFGVVLVELLTGKKPVSWTTLEEEKSLVARFILSLE
KESHLYDILDDRVRKEGEKERIIAVANLAKRCLNLNGKKRPTMKEVTFELEYIRMSSLPI
NSQQYILNEDEYGIGERMRPLDSATTSISIASNLSYRKSYSSSSNVQP

Transcript Sequence

Transcript ID

VIT_17s0000g04380.t01
Transcript Infomation

cdna chromosome:12X:17:4578143:4582285:-1 gene:VIT_17s0000g04380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTATCACCTTGTTGCTTCAGTTAATCATCTCCTTACTATGCCTAAAAGAAGCTTCA
GCATCTCCATCTTTGGCAAAGCAAGGCTGTGTAGCTCACTGTGGCGATGTTTCCATTCCC
TACCCGTTTGGCATCGGGACAGGTTGCTACTTCAACGATTATTTCTCAATCAACTGCAAC
GATTCTTCTACTCCTCCGAAGCCCTTCTTGAATCACTCTAAACTCAACCTGGAGCTGCTC
AATGTATCGCTGGAATACAAAACAGTGATGGTAAACAGTCCCATAACCCCCCTATGTGGA
GGTAATGGAACATGGAGAACCACTGATGTCGGTGGAAGGCCCTTCCGTTTCTCCAGGGTT
CATAACATATTCATGGTGGTGGGATGTGACACCAACGCTGTCCTCATGACCGATGATCAA
GAAGAAATCTTAGCGGGTTGCACATCCAATTGTAATAGCGGTATTACTAGTACTGGTACA
GGTTGCTATGGCATCCAGTGTTGCCAAACCACAATTCCGTACAGTAATCAATCCACTCAT
CTTGGTATGTACCAAGTGAAATATATCAAGACAAGTGGGGATTGCTCATATGCCTTCTTG
GGCGTTAGGGACTGGTTCGCCAACAACATCTCCAATCCAGCTATTAGTACCAATTCCGGC
TATGCTCCGTTGGTCATGTTCTGGGAGATGGAAACTGGCTCATTAGGACGCTGTTACAGT
CTAAATCTTGACTGGCAGTCTGAAACAGCTATCGATAGTTGCAGCTGTGTGAATAGATAC
GAAGGGAACCCTTATCTTCCCAATGGATGTCAAGTGGTCGAAGCTTGTGCCAACTGCAGC
ATTCTCGACTGTGGCATGATAGGGGCTGAATATCATTGCTTTCCCAGCAACAGAAGGGCG
AAGGAGCTAAAAGCTATGATTTTAGGTCTTGGTATAGGTGGAGGGTCATTGCTTCTACTC
GTTGGAAGTTTTGGACTATACAAAGGAGTCAAAAAGAGAAGGGAAATCATTCGCAAACAA
AAATTCTTTAAACGAAATGGCGGTCTATTATTACAACAACAGTTATCTTCTATTGAAACT
ATTGAAAAAACAAAAATTTTCACATTTAAGGAGTTAGAAATGGCAACTGACAACTTCAAC
AAGAGTCGAATTCTTGGTCAAGGAGGTCAAGGTACAGTTTATAAAGGAATGTTAAATGAT
GGAAGAATTATAGCAGTTAAAAGATCAAAAATAATATATGAAAGTCAACTGGAGCAATTC
ATCAATGAGATTATGATTCTTTCTCAAATCAACCATAGAAATATACTTGGGTTGTTAGGA
TGTTGTTTAGAGACAGAAGTACCTCTATTAGTTTATGAGTTCATCTCCAATGGAACTTTA
TTTCAACTTATCCATGATCAAAACAATGAGTTCCCATTCTCATGGCATATGCGTTTGCAA
ATTGCTTCAGAGGCAGCAGGAGCTCTTGCTTACTTGCATTCATCATCTTCCATGCCCATT
TATCATAGAGACATCAAGTCAACTAATATTCTTATAGATGAGAAGTATAGAGCAAAGGTT
TCAGATTTTGGTACATCAAGGTCCATTTCCATTGAGCAAACTCATTTAACTACTCACGTG
AAAGGGACTTTTGGTTACTTCGATCCGGAATATTTTCAATCAGGTCGATTCACTGAGAAG
AGTGATGTATACAGTTTTGGAGTTGTTTTGGTTGAACTTTTAACAGGGAAAAAACCTGTT
TCTTGGACAACTCTTGAAGAAGAAAAGAGTTTGGTGGCACGATTTATTTTATCATTGGAG
AAGGAGAGTCATCTATATGATATTCTTGATGATCGAGTTAGGAAAGAAGGAGAGAAAGAG
AGGATAATTGCAGTAGCCAACCTTGCAAAGCGGTGCTTGAACTTGAATGGCAAGAAAAGG
CCGACAATGAAAGAAGTAACATTTGAGTTAGAGTATATTAGAATGTCTTCTTTGCCTATA
AATTCTCAACAATATATTCTTAATGAGGATGAATACGGTATTGGGGAAAGAATGAGGCCC
TTGGATAGTGCTACAACTTCTATTTCAATAGCCTCAAATTTGAGTTATAGGAAATCATAT
TCCTCATCATCTAATGTTCAACCATAA