Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g04360.t01
CDS Infomation

cds chromosome:12X:17:4566359:4568980:-1 gene:VIT_17s0000g04360 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATTGGGTCACTGTTGCTCCATCTCATCTCGATACTATGCTTGACACAAGCATCGGCA
GCTGCTCCATCTTCGGCTAAACCAGGCTGCGAAGATCGCTGCGGAAACTACTCCATCCCC
TACCCTTTCGGCGTAGGCAAGGACTGCTACTATAACGAATGGTTCGCCATCAGCTGCAAC
AGTTCTTCTTCTTTCCCAACACCCCTCTTGAGTCATCCGAGGATCAATCTGGAGGTGCAG
CAGATTTCAGTGGAATACCAAACTGTTTCAGTTCAAACTCCCATGCCTGCCTACTGCCAA
AACCAGGAGGAGACCAACCGGACGTGGGACAGCATCGACTTGAAAGAAACCCCCTTCTTT
TTCTCTGCAGAACGCAATAGTTTGAGGGTGATAGGGTGTGGGAACGCTGTCCTCGTCACC
CGCAGTGGGGTTACCTTGGCGGGCTGCTCGTCCTTTTGCCAGAATACAAGTAACAATTTT
GTTGGTAATGGTGGTTGCTTTGGCATCAACTGCTGCCAAGCCACAATCCCATCTAACCTC
AATTTTTTCCGTCTAAATACTACTGCTACTTCTTATTTGAGCAGTGAGTCGCCTTGTACG
TTTGCTGCCTTGGGAAACGGATTCTCAACGGATCAAGCCTCTCCCCAGCAATCTTGGGCT
TCAATCGAACTGACCTGGATGATAGAAGAAGCAGTAGAGGGCAGTCAGTGTCAGAAGAAC
ACATTGAACGGAGCGGAAGTGGGAAATTATACTTACTACAATTGCTCCTGTCTGCCTTAC
GAGGAAGGCAACCCTTATCGACCCCATGCTTTATGCAAGAACTGCGCCGAATGTCGCAAG
GAAGCCGATGGCAGTTTCTCTTGCGTGGTTAGAGGTTCAACTTCAACTTCATCCACTTCT
CCAAAGCCTTTGATTCTAGGTCTCAGCTTTGGGATAGGAGGATCGGTATTTCTAATTATT
GGTTCATGCTGGTTGTATAAATTTATAAAGAAACAAAGGGTTATCAAGCGCAAAGAACAT
TTCTTTAAACGAAATGGTGGTTTATTGTTGCAACAAGAAATGTCTTCGGATAGGATTGCT
GTTGAGAAGACAAAAATTTTCTCTTCAGAAGAATTGGCAATAGCAACGGAAAACTTCAAC
AAGAATCGAATTCTTGGGCAAGGAGGACAAGGAACTGTATATAAAGGTATGTTAATTGAT
GGAAAAATCGTGGCTATTAAAAAATCAAAGATAGTTGATGAAGACCAATTGGAGCAATTC
ATTAATGAGATTATGATTTTATCACAAATAAATCATAGAAATATAATGAAGTTATTGGGT
TGTTGCTTAGAAACCGAGGTTCCTCTATTAGTGTTTGAGTTCATCTCTAATGGAACTCTC
TTCCAGCTTATCCATGATAAGAACAATGAATTTCCATTTTCATGGGAGATGCGATTGCAA
ATAGCAGCTGAAGTTGCCGATGCAATTACATATTTGCATTCAGCATCTTCCGTACCCATA
TATCATAGAGATATTAAGTCTTCAAACATACTTTTAGATGATAAATATAAAGCAAAAGTA
TCTGATTTTGGAATATCAAGGTCGGTCTCTTTAGGTCAAACCCACTTGACCACCCTCGTA
CAAGGAACCTTTGGCTACTTAGATCCAGAATATTTTGTAACAAATCACTTTACTGAAAAA
AGTGATGTCTATAGTTTTGGCGTTGTCCTTGTTGAATTGTTAACCGGTCAGAAGCCAATT
CCTTCAACAAGATCGGAAGAAGAAAGAAGCTTGGTTGCATATTTTACATCGTCACTGGAA
CAAGGTCGTCTATTCGATATCATTGATAATCGTGTTATGAAGGAGGGAGGAAAAGATGAG
ATCTTAGCCGTTGCTAACCTTGCAAGTCGATGCTTGCACTTCAAAGGAAAGGAAAGACCC
ACCATGAAAGAAGTAACAAAGGAGTTAGAACATTTCAGAACATCTTTTCTACCTTTCAGT
CATGTACCACAAAATATCCACAAGGGTGAATCCATGGTAACTGAAATGACGGGGCCTTTG
GATAGCACTTCTACATCGACAGAATGGTTTCAGCATGACAAGAAATCATCTTCATATGAT
GTATAG

Peptide Sequence

PEP ID

VIT_17s0000g04360.t01
PEP Infomation

pep chromosome:12X:17:4566359:4568980:-1 gene:VIT_17s0000g04360 transcript:VIT_17s0000g04360.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MIGSLLLHLISILCLTQASAAAPSSAKPGCEDRCGNYSIPYPFGVGKDCYYNEWFAISCN
SSSSFPTPLLSHPRINLEVQQISVEYQTVSVQTPMPAYCQNQEETNRTWDSIDLKETPFF
FSAERNSLRVIGCGNAVLVTRSGVTLAGCSSFCQNTSNNFVGNGGCFGINCCQATIPSNL
NFFRLNTTATSYLSSESPCTFAALGNGFSTDQASPQQSWASIELTWMIEEAVEGSQCQKN
TLNGAEVGNYTYYNCSCLPYEEGNPYRPHALCKNCAECRKEADGSFSCVVRGSTSTSSTS
PKPLILGLSFGIGGSVFLIIGSCWLYKFIKKQRVIKRKEHFFKRNGGLLLQQEMSSDRIA
VEKTKIFSSEELAIATENFNKNRILGQGGQGTVYKGMLIDGKIVAIKKSKIVDEDQLEQF
INEIMILSQINHRNIMKLLGCCLETEVPLLVFEFISNGTLFQLIHDKNNEFPFSWEMRLQ
IAAEVADAITYLHSASSVPIYHRDIKSSNILLDDKYKAKVSDFGISRSVSLGQTHLTTLV
QGTFGYLDPEYFVTNHFTEKSDVYSFGVVLVELLTGQKPIPSTRSEEERSLVAYFTSSLE
QGRLFDIIDNRVMKEGGKDEILAVANLASRCLHFKGKERPTMKEVTKELEHFRTSFLPFS
HVPQNIHKGESMVTEMTGPLDSTSTSTEWFQHDKKSSSYDV

Transcript Sequence

Transcript ID

VIT_17s0000g04360.t01
Transcript Infomation

cdna chromosome:12X:17:4566359:4568980:-1 gene:VIT_17s0000g04360 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATTGGGTCACTGTTGCTCCATCTCATCTCGATACTATGCTTGACACAAGCATCGGCA
GCTGCTCCATCTTCGGCTAAACCAGGCTGCGAAGATCGCTGCGGAAACTACTCCATCCCC
TACCCTTTCGGCGTAGGCAAGGACTGCTACTATAACGAATGGTTCGCCATCAGCTGCAAC
AGTTCTTCTTCTTTCCCAACACCCCTCTTGAGTCATCCGAGGATCAATCTGGAGGTGCAG
CAGATTTCAGTGGAATACCAAACTGTTTCAGTTCAAACTCCCATGCCTGCCTACTGCCAA
AACCAGGAGGAGACCAACCGGACGTGGGACAGCATCGACTTGAAAGAAACCCCCTTCTTT
TTCTCTGCAGAACGCAATAGTTTGAGGGTGATAGGGTGTGGGAACGCTGTCCTCGTCACC
CGCAGTGGGGTTACCTTGGCGGGCTGCTCGTCCTTTTGCCAGAATACAAGTAACAATTTT
GTTGGTAATGGTGGTTGCTTTGGCATCAACTGCTGCCAAGCCACAATCCCATCTAACCTC
AATTTTTTCCGTCTAAATACTACTGCTACTTCTTATTTGAGCAGTGAGTCGCCTTGTACG
TTTGCTGCCTTGGGAAACGGATTCTCAACGGATCAAGCCTCTCCCCAGCAATCTTGGGCT
TCAATCGAACTGACCTGGATGATAGAAGAAGCAGTAGAGGGCAGTCAGTGTCAGAAGAAC
ACATTGAACGGAGCGGAAGTGGGAAATTATACTTACTACAATTGCTCCTGTCTGCCTTAC
GAGGAAGGCAACCCTTATCGACCCCATGCTTTATGCAAGAACTGCGCCGAATGTCGCAAG
GAAGCCGATGGCAGTTTCTCTTGCGTGGTTAGAGGTTCAACTTCAACTTCATCCACTTCT
CCAAAGCCTTTGATTCTAGGTCTCAGCTTTGGGATAGGAGGATCGGTATTTCTAATTATT
GGTTCATGCTGGTTGTATAAATTTATAAAGAAACAAAGGGTTATCAAGCGCAAAGAACAT
TTCTTTAAACGAAATGGTGGTTTATTGTTGCAACAAGAAATGTCTTCGGATAGGATTGCT
GTTGAGAAGACAAAAATTTTCTCTTCAGAAGAATTGGCAATAGCAACGGAAAACTTCAAC
AAGAATCGAATTCTTGGGCAAGGAGGACAAGGAACTGTATATAAAGGTATGTTAATTGAT
GGAAAAATCGTGGCTATTAAAAAATCAAAGATAGTTGATGAAGACCAATTGGAGCAATTC
ATTAATGAGATTATGATTTTATCACAAATAAATCATAGAAATATAATGAAGTTATTGGGT
TGTTGCTTAGAAACCGAGGTTCCTCTATTAGTGTTTGAGTTCATCTCTAATGGAACTCTC
TTCCAGCTTATCCATGATAAGAACAATGAATTTCCATTTTCATGGGAGATGCGATTGCAA
ATAGCAGCTGAAGTTGCCGATGCAATTACATATTTGCATTCAGCATCTTCCGTACCCATA
TATCATAGAGATATTAAGTCTTCAAACATACTTTTAGATGATAAATATAAAGCAAAAGTA
TCTGATTTTGGAATATCAAGGTCGGTCTCTTTAGGTCAAACCCACTTGACCACCCTCGTA
CAAGGAACCTTTGGCTACTTAGATCCAGAATATTTTGTAACAAATCACTTTACTGAAAAA
AGTGATGTCTATAGTTTTGGCGTTGTCCTTGTTGAATTGTTAACCGGTCAGAAGCCAATT
CCTTCAACAAGATCGGAAGAAGAAAGAAGCTTGGTTGCATATTTTACATCGTCACTGGAA
CAAGGTCGTCTATTCGATATCATTGATAATCGTGTTATGAAGGAGGGAGGAAAAGATGAG
ATCTTAGCCGTTGCTAACCTTGCAAGTCGATGCTTGCACTTCAAAGGAAAGGAAAGACCC
ACCATGAAAGAAGTAACAAAGGAGTTAGAACATTTCAGAACATCTTTTCTACCTTTCAGT
CATGTACCACAAAATATCCACAAGGGTGAATCCATGGTAACTGAAATGACGGGGCCTTTG
GATAGCACTTCTACATCGACAGAATGGTTTCAGCATGACAAGAAATCATCTTCATATGAT
GTATAG