Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g04320.t01
CDS Infomation

cds chromosome:12X:17:4537858:4542922:1 gene:VIT_17s0000g04320 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCAATCCAACGAACCAGCCACTTCCATGGAGGTTGAAAATGTTTTATCGGAACCAAAT
CCCACATCTGGGACTTTTCCATCAAAGCCAAAGTTTGAGCCTCTAAAGGCTCATGAGATG
TCTGAAGGCCGAGTTCAGTTTCGGAAGGTCTCCGTTCCACCCCATCGATATACTCCTCTG
AAGAAAGCATGGATGGAAATCTATACTCCAATATATGAGCAGATGAAAATAGACATTCGA
ATGAATCTCAAAGCTCGCAAAGTTGAATTGAAAACCAGGGCAGACACTCCTGACATTAGC
AACTTGCAGAAGTGCACTGATTTTGTCCATGCTTTTATGCTAGGGTTTGGTGTGGTAGAT
GCCATTGCCCTCTTGCGTCTGGATGAGCTTTACGTAGAATCTTTTGAGATCAAAGATGTT
AAAACTCTTCGAGGTGAGCACCTGTCTCGTGCCATAGGAAGACTGTCTGGTAAAGGAGGC
AAAACAAAGTTTGCAATTGAGAATGCTACAAGGACGAGGATTGTAATTGCGGACACCAAG
ATTCACATATTAGGATCTTTTTCCAACATTAAAATTGCAAGAGATTCTCTTTGTAGCCTC
ATTTTAGGGTCCCCTGCTGGAAAGGTATATTCAAAACTCAGAGCAGTTACTGCTAGACTT
GCTGAGAGGTTTTGA

Peptide Sequence

PEP ID

VIT_17s0000g04320.t01
PEP Infomation

pep chromosome:12X:17:4537858:4542922:1 gene:VIT_17s0000g04320 transcript:VIT_17s0000g04320.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MQSNEPATSMEVENVLSEPNPTSGTFPSKPKFEPLKAHEMSEGRVQFRKVSVPPHRYTPL
KKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCTDFVHAFMLGFGVVD
AIALLRLDELYVESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATRTRIVIADTK
IHILGSFSNIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF

Transcript Sequence

Transcript ID

VIT_17s0000g04320.t01
Transcript Infomation

cdna chromosome:12X:17:4537858:4542922:1 gene:VIT_17s0000g04320 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAGAAGAAGAAGAGCTCATTTCCATACGACCTTTCTTCTCTCTTCAACAGAGCCAGCATT
TAACTGAACCACACCATGCAATCCAACGAACCAGCCACTTCCATGGAGGTTGAAAATGTT
TTATCGGAACCAAATCCCACATCTGGGACTTTTCCATCAAAGCCAAAGTTTGAGCCTCTA
AAGGCTCATGAGATGTCTGAAGGCCGAGTTCAGTTTCGGAAGGTCTCCGTTCCACCCCAT
CGATATACTCCTCTGAAGAAAGCATGGATGGAAATCTATACTCCAATATATGAGCAGATG
AAAATAGACATTCGAATGAATCTCAAAGCTCGCAAAGTTGAATTGAAAACCAGGGCAGAC
ACTCCTGACATTAGCAACTTGCAGAAGTGCACTGATTTTGTCCATGCTTTTATGCTAGGG
TTTGGTGTGGTAGATGCCATTGCCCTCTTGCGTCTGGATGAGCTTTACGTAGAATCTTTT
GAGATCAAAGATGTTAAAACTCTTCGAGGTGAGCACCTGTCTCGTGCCATAGGAAGACTG
TCTGGTAAAGGAGGCAAAACAAAGTTTGCAATTGAGAATGCTACAAGGACGAGGATTGTA
ATTGCGGACACCAAGATTCACATATTAGGATCTTTTTCCAACATTAAAATTGCAAGAGAT
TCTCTTTGTAGCCTCATTTTAGGGTCCCCTGCTGGAAAGGTATATTCAAAACTCAGAGCA
GTTACTGCTAGACTTGCTGAGAGGTTTTGATCTTTCATTTCTGTTGTTGTTTTGAGGCTT
TGTTTTGAGTTTTCGATTTTGGAAGGTTTGCATTAAAGATTAGAAGGCAGAGTGAGCTCA
GTGGGAAATTTTCCGCATCTGGGGTTGTGTCAAATATTGAGATTAGACCATTGTAGAGAG
ATTTTATTCACTTTTCATGTGTTTAATTTTTTCTAATTCCTATAAACGATCTAAACTAAA
CTATTGATGCTTGGATTCTGGTGGATTCCCTCATTACTCATGTCCTGCTTTTGAGGACTC
ATCTTCTCCAG