Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g04150.t01
CDS Infomation

cds chromosome:12X:17:4274480:4277475:1 gene:VIT_17s0000g04150 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACTGTTTTGTCTGTGAGTACTCCTCCGGCTCCTCAGGCTCCTCTGGCGGCCACCGGA
CCTCGGACACTGGTGGTGGGTGCATCCGGGTTCATAGGGCGGTTTGTGGCGGAAGCCAGC
CTCTCCTCCGGCCACCCCACCTATGTCCTAGTCCGCTCCTCCGCCACGACCTCCTCTTCC
AAGGCCAGCACCATCAAGTCCCTCGAAGACCAGGGCGCCATCCTTGTTACCGGTTCAATA
GGGGACAAGGAAGTAATGATAGAGATTCTGAGGAAGTATGAGATAGAAGTGGTGATATCA
GCTGTGGGTGGAGCCACTATATTGGACCAGCTCACCCTAGCGGAAGCCATTAAAGCGGTT
GGTAGCATTAAGAGGTTCCTTCCATCAGAATTTGGGCACGACATCGACCGAGCGGAACCA
GTGGAGCCGGGGCTGACCATGTACATGGAGAAGAGAAAAGTCAGACGGTTCATTGAGGAG
GCCGCCATCCCCTACACCTACATCTGCTGCAACTCCATCGCCGCTTGGCCCTACCATGAC
AATACCCACCCTGCTGACGTCCTCCCACCCTTGGATCGTTTCCATATCTACGGTGATGGC
TCTGTCAAAGCTTACTTCGTGGCGGGTACCGACATCGGAAAATTCACAATCAAAACCATA
AACGACGATCGAACAGTGAACAAATCGCTTCATTTCCGACCTCCCAGCAATCTTGTAAGC
ATAAACGAGCTGGCATCACTGTGGGAGAAGAAGATCGGGCGGACGCTCCCCCGTGTAACC
GTGGAAGAAGATGACCTACTAGCCGCTGCCGCAGAGATGTGCATTCCCGATAGCATCGTC
GCGTCCTTCACTCACGACATCTTCATAAAGGGATGCCAAGTAAATTTCAGCTTGGATAAA
CCTACAGACCTAGAAGCCACGTCTCTTTATCCGGAGATGCAGTTCAGGACCATAGATGAG
TGCTTCGATGAGTTCGTGGAGAAGATAATGGGAGGTCAAGCAGCAGCCGAGAAGGAGGGC
ATTGTGGTGCCCGCTTCTGCCCCGGATGCTTTGGTCATCACTGCTACCTGCGCCTGA

Peptide Sequence

PEP ID

VIT_17s0000g04150.t01
PEP Infomation

pep chromosome:12X:17:4274480:4277475:1 gene:VIT_17s0000g04150 transcript:VIT_17s0000g04150.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTVLSVSTPPAPQAPLAATGPRTLVVGASGFIGRFVAEASLSSGHPTYVLVRSSATTSSS
KASTIKSLEDQGAILVTGSIGDKEVMIEILRKYEIEVVISAVGGATILDQLTLAEAIKAV
GSIKRFLPSEFGHDIDRAEPVEPGLTMYMEKRKVRRFIEEAAIPYTYICCNSIAAWPYHD
NTHPADVLPPLDRFHIYGDGSVKAYFVAGTDIGKFTIKTINDDRTVNKSLHFRPPSNLVS
INELASLWEKKIGRTLPRVTVEEDDLLAAAAEMCIPDSIVASFTHDIFIKGCQVNFSLDK
PTDLEATSLYPEMQFRTIDECFDEFVEKIMGGQAAAEKEGIVVPASAPDALVITATCA

Transcript Sequence

Transcript ID

VIT_17s0000g04150.t01
Transcript Infomation

cdna chromosome:12X:17:4274480:4277475:1 gene:VIT_17s0000g04150 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTTTTCCCCCCCTCCTGCACACCCTCTTCTTCTTTTTCTTCTTTCTCAGAAAATTAACAC
CGATATGACTGTTTTGTCTGTGAGTACTCCTCCGGCTCCTCAGGCTCCTCTGGCGGCCAC
CGGACCTCGGACACTGGTGGTGGGTGCATCCGGGTTCATAGGGCGGTTTGTGGCGGAAGC
CAGCCTCTCCTCCGGCCACCCCACCTATGTCCTAGTCCGCTCCTCCGCCACGACCTCCTC
TTCCAAGGCCAGCACCATCAAGTCCCTCGAAGACCAGGGCGCCATCCTTGTTACCGGTTC
AATAGGGGACAAGGAAGTAATGATAGAGATTCTGAGGAAGTATGAGATAGAAGTGGTGAT
ATCAGCTGTGGGTGGAGCCACTATATTGGACCAGCTCACCCTAGCGGAAGCCATTAAAGC
GGTTGGTAGCATTAAGAGGTTCCTTCCATCAGAATTTGGGCACGACATCGACCGAGCGGA
ACCAGTGGAGCCGGGGCTGACCATGTACATGGAGAAGAGAAAAGTCAGACGGTTCATTGA
GGAGGCCGCCATCCCCTACACCTACATCTGCTGCAACTCCATCGCCGCTTGGCCCTACCA
TGACAATACCCACCCTGCTGACGTCCTCCCACCCTTGGATCGTTTCCATATCTACGGTGA
TGGCTCTGTCAAAGCTTACTTCGTGGCGGGTACCGACATCGGAAAATTCACAATCAAAAC
CATAAACGACGATCGAACAGTGAACAAATCGCTTCATTTCCGACCTCCCAGCAATCTTGT
AAGCATAAACGAGCTGGCATCACTGTGGGAGAAGAAGATCGGGCGGACGCTCCCCCGTGT
AACCGTGGAAGAAGATGACCTACTAGCCGCTGCCGCAGAGATGTGCATTCCCGATAGCAT
CGTCGCGTCCTTCACTCACGACATCTTCATAAAGGGATGCCAAGTAAATTTCAGCTTGGA
TAAACCTACAGACCTAGAAGCCACGTCTCTTTATCCGGAGATGCAGTTCAGGACCATAGA
TGAGTGCTTCGATGAGTTCGTGGAGAAGATAATGGGAGGTCAAGCAGCAGCCGAGAAGGA
GGGCATTGTGGTGCCCGCTTCTGCCCCGGATGCTTTGGTCATCACTGCTACCTGCGCCTG
ATCACCGCCACTTCTCTCGACATAAATGATGATGTGGCCAGCTCCCCAATCTTATTGGAA
TCTAGTAATATTGGTGCTTGTGTATCATTGATTTGTTTTTAAGCCTTATCTCATTTTTAT
TTAAGAAAACAATCATGGGTTTCTCTTAAATTAAATTTGAACTCAATCAAAGAAACTGCA
GAAATTCTGGAAATTCAAAAGAGCGAGTACAGAAGCTCCTTTAT