Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g03990.t01
CDS Infomation

cds chromosome:12X:17:4010086:4011979:-1 gene:VIT_17s0000g03990 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGACAAGTTTTTTATTTTCTCCATTTTCGCTGCCTTCGCTCTCTCTCTTTCTCCT
TTTGTTTTCTCCAGGGAGTTATCGCTGGACACTGATTCTCACAGCTCTGTGCTGGATGTT
TCGGGTTCTATTCGGAAGACTCTCGACGTGCTATCTCACAAGAGCAGTGTCTCGAAACCC
TCTGACCAGAGAGATGAGAAGACCACGTCGTTTTCGCCTACTTCTCTGGCTTCGTCTTTC
TCTCTGGAGCTTCACCCGAGGGAGCTTCTTCATGGAGGCTCGCATAAGGACTACAGGGCT
TTGATGCTTTCGCGACTCGCTCGTGACTCAGCCCGGGTCAAGGCCATCAATACTAAGCTC
CAACTCGCTGTATCCGGCACCGACAAGTCCGATCTCGTGCCGATGGACACGGAGATACTC
CATCCACAGGATTTCTCGACTCCGGTCACCTCCGGTACGAGTCAGGGCAGCGGCGAGTAC
TTTTTGAGAGTTGGAATTGGCCGGCCTTCGAAAACGTTCTACATGGTTATCGACACCGGC
AGCGACGTCAACTGGCTTCAGTGCAAGCCTTGCGACGACTGCTATCAGCAAGTCGATCCG
ATTTTCGATCCGGCTTCATCGTCCTCGTTCTCACGTCTCGGATGCCAAACTCCACAATGC
CGGAATCTCGATGTGTTCGCGTGTCGGAATGATTCGTGTCTCTACCAGGTCTCCTACGGC
GACGGATCGTACACCGTCGGCGACTTCGCCACTGAAACGGTGTCGTTTGGGAACTCTGGA
TCTGTGGATAAGGTGGCCATCGGATGCGGTCACGACAACGAGGGCTTGTTTGTCGGTGCG
GCTGGCTTGATAGGACTTGGCGGCGGCCCACTCTCGCTCACTTCTCAGATCAAAGCCTCC
TCGTTCTCTTACTGCCTCGTCAACCGCGACTCCGTCGACTCGTCGACTCTCGAATTCAAC
TCTGCCAAGCCAAGTGACTCCGTAACCGCGCCGATTTTCAAAAACAGCAAAGTGGACACG
TTCTACTACGTCGGCATCACAGGGATGAGCGTCGGCGGTGAGAAGCTCGCCATCCCGCCC
TCCATCTTCGAGGTCGACGGGAGTGGAAAAGGAGGAATCATCGTAGATTGCGGCACCGCT
GTGACTCGATTGCAGACTCAGGCCTACAACGCGCTCCGAGACACGTTCGTGAAGCTCACC
AAGGACCTGCCATCGACGAGCGGCTTCGCCTTGTTCGACACCTGTTACAATCTCTCCTCG
CGAACCAGCGTTCGTGTCCCAACGGTGGCGTTTCTGTTCGACGGAGGAAAGTCCCTGCCC
TTGCCGCCGAGCAACTACCTGATTCCCGTAGACTCGGCCGGAACATTCTGTTTGGCGTTT
GCTCCAACGACGGCCTCTCTGTCCATCATCGGGAACGTACAGCAGCAGGGGACACGTGTC
ACGTACGATTTGGCCAACTCGCAAGTTTCCTTCTCCTCGCGTAAATGTTAG

Peptide Sequence

PEP ID

VIT_17s0000g03990.t01
PEP Infomation

pep chromosome:12X:17:4010086:4011979:-1 gene:VIT_17s0000g03990 transcript:VIT_17s0000g03990.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MADKFFIFSIFAAFALSLSPFVFSRELSLDTDSHSSVLDVSGSIRKTLDVLSHKSSVSKP
SDQRDEKTTSFSPTSLASSFSLELHPRELLHGGSHKDYRALMLSRLARDSARVKAINTKL
QLAVSGTDKSDLVPMDTEILHPQDFSTPVTSGTSQGSGEYFLRVGIGRPSKTFYMVIDTG
SDVNWLQCKPCDDCYQQVDPIFDPASSSSFSRLGCQTPQCRNLDVFACRNDSCLYQVSYG
DGSYTVGDFATETVSFGNSGSVDKVAIGCGHDNEGLFVGAAGLIGLGGGPLSLTSQIKAS
SFSYCLVNRDSVDSSTLEFNSAKPSDSVTAPIFKNSKVDTFYYVGITGMSVGGEKLAIPP
SIFEVDGSGKGGIIVDCGTAVTRLQTQAYNALRDTFVKLTKDLPSTSGFALFDTCYNLSS
RTSVRVPTVAFLFDGGKSLPLPPSNYLIPVDSAGTFCLAFAPTTASLSIIGNVQQQGTRV
TYDLANSQVSFSSRKC

Transcript Sequence

Transcript ID

VIT_17s0000g03990.t01
Transcript Infomation

cdna chromosome:12X:17:4010086:4011979:-1 gene:VIT_17s0000g03990 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATTACTGCTCCACCTCTGTCTGTGTCTGGCTATCCTCTCTGCAGCCAAAATGGCGGACAA
GTTTTTTATTTTCTCCATTTTCGCTGCCTTCGCTCTCTCTCTTTCTCCTTTTGTTTTCTC
CAGGGAGTTATCGCTGGACACTGATTCTCACAGCTCTGTGCTGGATGTTTCGGGTTCTAT
TCGGAAGACTCTCGACGTGCTATCTCACAAGAGCAGTGTCTCGAAACCCTCTGACCAGAG
AGATGAGAAGACCACGTCGTTTTCGCCTACTTCTCTGGCTTCGTCTTTCTCTCTGGAGCT
TCACCCGAGGGAGCTTCTTCATGGAGGCTCGCATAAGGACTACAGGGCTTTGATGCTTTC
GCGACTCGCTCGTGACTCAGCCCGGGTCAAGGCCATCAATACTAAGCTCCAACTCGCTGT
ATCCGGCACCGACAAGTCCGATCTCGTGCCGATGGACACGGAGATACTCCATCCACAGGA
TTTCTCGACTCCGGTCACCTCCGGTACGAGTCAGGGCAGCGGCGAGTACTTTTTGAGAGT
TGGAATTGGCCGGCCTTCGAAAACGTTCTACATGGTTATCGACACCGGCAGCGACGTCAA
CTGGCTTCAGTGCAAGCCTTGCGACGACTGCTATCAGCAAGTCGATCCGATTTTCGATCC
GGCTTCATCGTCCTCGTTCTCACGTCTCGGATGCCAAACTCCACAATGCCGGAATCTCGA
TGTGTTCGCGTGTCGGAATGATTCGTGTCTCTACCAGGTCTCCTACGGCGACGGATCGTA
CACCGTCGGCGACTTCGCCACTGAAACGGTGTCGTTTGGGAACTCTGGATCTGTGGATAA
GGTGGCCATCGGATGCGGTCACGACAACGAGGGCTTGTTTGTCGGTGCGGCTGGCTTGAT
AGGACTTGGCGGCGGCCCACTCTCGCTCACTTCTCAGATCAAAGCCTCCTCGTTCTCTTA
CTGCCTCGTCAACCGCGACTCCGTCGACTCGTCGACTCTCGAATTCAACTCTGCCAAGCC
AAGTGACTCCGTAACCGCGCCGATTTTCAAAAACAGCAAAGTGGACACGTTCTACTACGT
CGGCATCACAGGGATGAGCGTCGGCGGTGAGAAGCTCGCCATCCCGCCCTCCATCTTCGA
GGTCGACGGGAGTGGAAAAGGAGGAATCATCGTAGATTGCGGCACCGCTGTGACTCGATT
GCAGACTCAGGCCTACAACGCGCTCCGAGACACGTTCGTGAAGCTCACCAAGGACCTGCC
ATCGACGAGCGGCTTCGCCTTGTTCGACACCTGTTACAATCTCTCCTCGCGAACCAGCGT
TCGTGTCCCAACGGTGGCGTTTCTGTTCGACGGAGGAAAGTCCCTGCCCTTGCCGCCGAG
CAACTACCTGATTCCCGTAGACTCGGCCGGAACATTCTGTTTGGCGTTTGCTCCAACGAC
GGCCTCTCTGTCCATCATCGGGAACGTACAGCAGCAGGGGACACGTGTCACGTACGATTT
GGCCAACTCGCAAGTTTCCTTCTCCTCGCGTAAATGTTAGTAGGTTCGATGTGAAATTAC
GAAACTATCTCCGAAATAAGTTAAAAAAATTACGACATAGGAAAGGCGATTTTCACTTGG
TTCCGTAGAAAAATAGTGGGTGGGAAGTGGGAGGCCATCTAAATAAATGTAAAGTAGCTT
TAGTGGGTGTGGCCGTGTGGGCCATTGACTCATAATTATTCGTTATTATAGGCTGTTGTC
CCAGTCAGTGGCATGTATAGGAAATTAATCAAAGTATAGGGGTTAAGGGCAGTAGTTTAG
CATATCATCCCCGGCTGTTATATATGCTTATGCGTTGTGTTTTCGTGTGAAAAACGTCAA
TAAAACAAGGAAGAAGAGAGTCAAAATGATGAAA