Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g03960.t01
CDS Infomation

cds chromosome:12X:17:3953004:3954418:-1 gene:VIT_17s0000g03960 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTCGCATCCAAGATCAATCGCAGAACCAAGCTGAGTACGAGCTACAGCCTCAAGAA
TATCAATCCGAATCAACACAGGACTTGACACTCGCTCTGGATCATGATCAACTCCAGCAA
GAGGAGTATCCACAAGGGCCAAAACACCCATCCGACGCCATGGAAAGCGAGCCACAAGCT
CAGCAACAGTTCCAGCAACCACCACAATACGGTAACCCACAAGCACAGCCCAACCCTGCT
TACATGCCTCAACAGACTCAGCAAGTCTCGCGTCCGCAGAACCCGCAAATGAATGCGATG
AACGCCAACCAGCTTGCTCCGTTCCCCCCACAGAGCCCACAATCATTGCCTCTGCAGCAG
TCGCCGCAACTCCATGTGTTTCCTCATGGTCCATTCCAACCGCAGGGCTTCGGTACTGGT
ATGCATGGTTACCAATCTCCATCACCGGTGCCATTTCCGCCGGCGAGTGGTGAATATCAG
GGTGTTCTGGCTTCTCCCCACAAACCTCCGGCTGCTGCTGAGTATTGGACAAGTGGGCTG
TTTGATTGCATGAATGATCCTACCAATGCACTAGTCACAGTTTTCTTCCCATGCGTGACA
TTCGGGCAAGTCGCGGAGATTGTGGACCGTGGTCACACTTCATGCGGGACCAGCGGACTA
CTCTATGGATTGATAGCCTTCCTCATCGGATTGCCATGCATAATGTCATGCACGTACCGC
ACAAAGATGAGGAGCATGTACAACCTCTCCGAATCTCCAGGACCTGATTGGGTTGTTCAT
TGTCTCTGTGAGTGTTGTGCTCTTTGCCAGGAATACAGAGAACTTCAAGCAAGAGGCTTC
GACCCTTCAATTGGATGGATTGGAAATGTAGCCAAAAGTCAGAACATCCAGATGCAGCAT
GGTGCCATGGTGCCACCAGGGAGCCAAACTATGATGGGTTAA

Peptide Sequence

PEP ID

VIT_17s0000g03960.t01
PEP Infomation

pep chromosome:12X:17:3953004:3954418:-1 gene:VIT_17s0000g03960 transcript:VIT_17s0000g03960.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGRIQDQSQNQAEYELQPQEYQSESTQDLTLALDHDQLQQEEYPQGPKHPSDAMESEPQA
QQQFQQPPQYGNPQAQPNPAYMPQQTQQVSRPQNPQMNAMNANQLAPFPPQSPQSLPLQQ
SPQLHVFPHGPFQPQGFGTGMHGYQSPSPVPFPPASGEYQGVLASPHKPPAAAEYWTSGL
FDCMNDPTNALVTVFFPCVTFGQVAEIVDRGHTSCGTSGLLYGLIAFLIGLPCIMSCTYR
TKMRSMYNLSESPGPDWVVHCLCECCALCQEYRELQARGFDPSIGWIGNVAKSQNIQMQH
GAMVPPGSQTMMG

Transcript Sequence

Transcript ID

VIT_17s0000g03960.t01
Transcript Infomation

cdna chromosome:12X:17:3953004:3954418:-1 gene:VIT_17s0000g03960 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACTAATATCAAATCTCCCTCTCTGTATCTCTCTCTTCCTAATTCTCTGCAGATGGGTCGC
ATCCAAGATCAATCGCAGAACCAAGCTGAGTACGAGCTACAGCCTCAAGAATATCAATCC
GAATCAACACAGGACTTGACACTCGCTCTGGATCATGATCAACTCCAGCAAGAGGAGTAT
CCACAAGGGCCAAAACACCCATCCGACGCCATGGAAAGCGAGCCACAAGCTCAGCAACAG
TTCCAGCAACCACCACAATACGGTAACCCACAAGCACAGCCCAACCCTGCTTACATGCCT
CAACAGACTCAGCAAGTCTCGCGTCCGCAGAACCCGCAAATGAATGCGATGAACGCCAAC
CAGCTTGCTCCGTTCCCCCCACAGAGCCCACAATCATTGCCTCTGCAGCAGTCGCCGCAA
CTCCATGTGTTTCCTCATGGTCCATTCCAACCGCAGGGCTTCGGTACTGGTATGCATGGT
TACCAATCTCCATCACCGGTGCCATTTCCGCCGGCGAGTGGTGAATATCAGGGTGTTCTG
GCTTCTCCCCACAAACCTCCGGCTGCTGCTGAGTATTGGACAAGTGGGCTGTTTGATTGC
ATGAATGATCCTACCAATGCACTAGTCACAGTTTTCTTCCCATGCGTGACATTCGGGCAA
GTCGCGGAGATTGTGGACCGTGGTCACACTTCATGCGGGACCAGCGGACTACTCTATGGA
TTGATAGCCTTCCTCATCGGATTGCCATGCATAATGTCATGCACGTACCGCACAAAGATG
AGGAGCATGTACAACCTCTCCGAATCTCCAGGACCTGATTGGGTTGTTCATTGTCTCTGT
GAGTGTTGTGCTCTTTGCCAGGAATACAGAGAACTTCAAGCAAGAGGCTTCGACCCTTCA
ATTGGATGGATTGGAAATGTAGCCAAAAGTCAGAACATCCAGATGCAGCATGGTGCCATG
GTGCCACCAGGGAGCCAAACTATGATGGGTTAATT