Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g03850.t01
CDS Infomation

cds chromosome:12X:17:3767971:3773085:1 gene:VIT_17s0000g03850 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACCGCGAAACTTGGGTCGTTCAGACACACTTTTGCAGAGAAGAGGGAGAGAGACAGA
TTGTTATCATGCAAGGGGTATTCAGAGCTAGGGTTCGTCCATTTAGAAGAAAATGAAGAA
GCAACACCCAGGTGGTGTTCTTTCCGATCGATTCGCCACAAATTTGCGAATTGGTGGAAG
ACCACGAAAGATGTTGCCGCCAAAGGATGGGAAATGGGTCTGTCCGATCCTCGGAAAATT
GTCTTTTCTGCGAAAATGGGTCTGGCTTTGATGCTTATAACGTTGTTGATTTTCTTGAAA
GAGCCCGTGAAGGATCTGGGTCGGTACTCTGTTTGGGCCATTCTTACTGTTGTGGTTGTC
TTTGAATTCAGTATAGGAGCGACCCTAAGCAAAGGATTTAACCGTGGGTTGGGAACGTTC
TCTGCAGGAGGCCTTGCTCTAGCCATGGCTGAGTTGTCTACATTGGCTGGAAAATGGGAA
GAAGTTGTCATTATTATCAGTATTTTTATCATAGGATTTTGTGCAACTTATGCAAAGCTG
TACCCAACAATGAAGGCATATGAATATGGGTTCCGAGTTTTCACGTTGACATATTGTTTC
ATAATGGTATCTGGGTATAGGACAAGAGAATTTATCGAAACAGCCATTACTCGATTCTTG
CTCATTGCCTTGGGTGCTGGGGTATGTTTGCTTGTAAATATATGCATCTATCCCATCTGG
GCTGGTGAGGATCTGCACAACTTGGTAGCGAAGAATTTCATGGGTGTTGCTAATTCCCTG
GAAGGTTGTGTCAATGGGTACCTCAATTGTGTTGAATATGAGAGGGTTCCTTCCAAGATC
CTTACTTACCAAGCTTCAGACGATCCACTTTATGCGGGGTATAGATCAGCTGTTGAATCT
ACAAGTACAGAGGAAGCTTTGGTGAGCTTTGCCATCTGGGAGCCACCTCATGGTCCTTAC
AAAATGCTTAAATATCCTTGGAAGAATTACATCAAACTAAGCGGGGCACTGAGGCATTGT
GCATTCATGGTTATGGCATTGCATGGATGCATACTTTCAGAAATACAGGCATCAGCTGAA
CGAAGGCAGGTCTTTAGGAATGAGCTTCAGAGGTTAGGTAATGAAGGTGCTAAAGTGTTA
CGGGAGCTAGGAAGCAAAGTTAAAAGGTTGGAGAAATTAGGACCAGTGGACATTCTCTAT
GAAGTTCATGAGGCAGCAGAAGCATTGCAGAAGAAGGTAGACCAGAAATCATATCTTCTT
GTCAATTCAGAAAACTGGGAAATTGGAAAACGGCCAAAGGAGGTGATAGATCAGCAAGAG
ATTCTCAACATGGAAAATGAAGAAAACAAATTTCTTGAATTCAAGTCCCTCAGTGAAGCT
GTGCTTGATCTCAGATCACTTCCAGGGGCACGAGGTTGGGATTTCCAGATCCCTGACATG
GGTGGCTACTCACCACTGCCTGATGGTGCTCCCCCAGAGAAGCCAGCCAATTCACAGGTT
CCCCGGTCTTCCTTTTTATCATCTGATGCTAAGGCTGAGCCTAAGGAAGAAGAATCAAAA
ACATATGAAAATGCTAGTGCATTGTCTTTAGCAACGTTTACGTCACTTTTGATTGAATTT
GTTGCGAGGCTTCAAAATATTGTTGATTCATTTGAAGAATTAAGTGAGAAAGCAAATTTT
AAGGATCCTGCTGATCAAACAGCCGTGCCTGCAGCAGTGGAGTATGTTGGGTTTGGAACA
AGATTGCGCAGGTGGCTGAAGTTGTAG

Peptide Sequence

PEP ID

VIT_17s0000g03850.t01
PEP Infomation

pep chromosome:12X:17:3767971:3773085:1 gene:VIT_17s0000g03850 transcript:VIT_17s0000g03850.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTAKLGSFRHTFAEKRERDRLLSCKGYSELGFVHLEENEEATPRWCSFRSIRHKFANWWK
TTKDVAAKGWEMGLSDPRKIVFSAKMGLALMLITLLIFLKEPVKDLGRYSVWAILTVVVV
FEFSIGATLSKGFNRGLGTFSAGGLALAMAELSTLAGKWEEVVIIISIFIIGFCATYAKL
YPTMKAYEYGFRVFTLTYCFIMVSGYRTREFIETAITRFLLIALGAGVCLLVNICIYPIW
AGEDLHNLVAKNFMGVANSLEGCVNGYLNCVEYERVPSKILTYQASDDPLYAGYRSAVES
TSTEEALVSFAIWEPPHGPYKMLKYPWKNYIKLSGALRHCAFMVMALHGCILSEIQASAE
RRQVFRNELQRLGNEGAKVLRELGSKVKRLEKLGPVDILYEVHEAAEALQKKVDQKSYLL
VNSENWEIGKRPKEVIDQQEILNMENEENKFLEFKSLSEAVLDLRSLPGARGWDFQIPDM
GGYSPLPDGAPPEKPANSQVPRSSFLSSDAKAEPKEEESKTYENASALSLATFTSLLIEF
VARLQNIVDSFEELSEKANFKDPADQTAVPAAVEYVGFGTRLRRWLKL

Transcript Sequence

Transcript ID

VIT_17s0000g03850.t01
Transcript Infomation

cdna chromosome:12X:17:3767971:3773085:1 gene:VIT_17s0000g03850 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACCGCGAAACTTGGGTCGTTCAGACACACTTTTGCAGAGAAGAGGGAGAGAGACAGA
TTGTTATCATGCAAGGGGTATTCAGAGCTAGGGTTCGTCCATTTAGAAGAAAATGAAGAA
GCAACACCCAGGTGGTGTTCTTTCCGATCGATTCGCCACAAATTTGCGAATTGGTGGAAG
ACCACGAAAGATGTTGCCGCCAAAGGATGGGAAATGGGTCTGTCCGATCCTCGGAAAATT
GTCTTTTCTGCGAAAATGGGTCTGGCTTTGATGCTTATAACGTTGTTGATTTTCTTGAAA
GAGCCCGTGAAGGATCTGGGTCGGTACTCTGTTTGGGCCATTCTTACTGTTGTGGTTGTC
TTTGAATTCAGTATAGGAGCGACCCTAAGCAAAGGATTTAACCGTGGGTTGGGAACGTTC
TCTGCAGGAGGCCTTGCTCTAGCCATGGCTGAGTTGTCTACATTGGCTGGAAAATGGGAA
GAAGTTGTCATTATTATCAGTATTTTTATCATAGGATTTTGTGCAACTTATGCAAAGCTG
TACCCAACAATGAAGGCATATGAATATGGGTTCCGAGTTTTCACGTTGACATATTGTTTC
ATAATGGTATCTGGGTATAGGACAAGAGAATTTATCGAAACAGCCATTACTCGATTCTTG
CTCATTGCCTTGGGTGCTGGGGTATGTTTGCTTGTAAATATATGCATCTATCCCATCTGG
GCTGGTGAGGATCTGCACAACTTGGTAGCGAAGAATTTCATGGGTGTTGCTAATTCCCTG
GAAGGTTGTGTCAATGGGTACCTCAATTGTGTTGAATATGAGAGGGTTCCTTCCAAGATC
CTTACTTACCAAGCTTCAGACGATCCACTTTATGCGGGGTATAGATCAGCTGTTGAATCT
ACAAGTACAGAGGAAGCTTTGGTGAGCTTTGCCATCTGGGAGCCACCTCATGGTCCTTAC
AAAATGCTTAAATATCCTTGGAAGAATTACATCAAACTAAGCGGGGCACTGAGGCATTGT
GCATTCATGGTTATGGCATTGCATGGATGCATACTTTCAGAAATACAGGCATCAGCTGAA
CGAAGGCAGGTCTTTAGGAATGAGCTTCAGAGGTTAGGTAATGAAGGTGCTAAAGTGTTA
CGGGAGCTAGGAAGCAAAGTTAAAAGGTTGGAGAAATTAGGACCAGTGGACATTCTCTAT
GAAGTTCATGAGGCAGCAGAAGCATTGCAGAAGAAGGTAGACCAGAAATCATATCTTCTT
GTCAATTCAGAAAACTGGGAAATTGGAAAACGGCCAAAGGAGGTGATAGATCAGCAAGAG
ATTCTCAACATGGAAAATGAAGAAAACAAATTTCTTGAATTCAAGTCCCTCAGTGAAGCT
GTGCTTGATCTCAGATCACTTCCAGGGGCACGAGGTTGGGATTTCCAGATCCCTGACATG
GGTGGCTACTCACCACTGCCTGATGGTGCTCCCCCAGAGAAGCCAGCCAATTCACAGGTT
CCCCGGTCTTCCTTTTTATCATCTGATGCTAAGGCTGAGCCTAAGGAAGAAGAATCAAAA
ACATATGAAAATGCTAGTGCATTGTCTTTAGCAACGTTTACGTCACTTTTGATTGAATTT
GTTGCGAGGCTTCAAAATATTGTTGATTCATTTGAAGAATTAAGTGAGAAAGCAAATTTT
AAGGATCCTGCTGATCAAACAGCCGTGCCTGCAGCAGTGGAGTATGTTGGGTTTGGAACA
AGATTGCGCAGGTGGCTGAAGTTGTAGAATTGAGAGATGGGCAACTCAGTTGTTAAAGAT
CATCTCTAGCTTGAAAGATCAATAACCCAGAAAACAACCGTGTACTTGGAGCCAAAATTC
CAGAATTACAGTCTGTATCCTAGATCTCAACAAATTGGAGTTCACAACTGACATCTCTGC
AGTACAGAATTCCAACCGGAGCTGATTCTACAACTGTCTGAAAGGGAGGCCCTGAAGTTG
TATGATGAACCTTGGTTCATCCAGGGCAAGGCAAATCAGAAACTTCACAAGCCATAAGGA
GCTCAGAGCATGTCTCGAAAGACCAACAATCGGCATGCCTGAATGGAAAGTGTAAATAAC
TAACAAATGAACAAGAACTGATGGGTTCAACTAAGACTTGCCAAGGGATGTCATGACATG
TTTGACATGGAAATGCAAATTTCCTTGTCTGCAGGTATGCCATTATTGACTGCCTTGGAA
GTGTTAGATGAAGCCAGAGAAAGCAGTGATGGTGCTTCTCATTTAAAACTGCAAATATGC
GGGTTTAATATGCCAAAGGACCCCTTCAACGTCTCAAGGTTATTTTCCTTGTTTTCTGTC
TTGAACTTAATAAAATTGTAGGTTCTATCATCCAAGGTTATTATCCTTGAATAAACCTCT
TTAAGTTTAGCTTTATTTGCCTGCCCCAAGTCTATTTTTTTTTTTTTTTAAT