Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g03760.t01
CDS Infomation

cds chromosome:12X:17:3695085:3714845:1 gene:VIT_17s0000g03760 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGAGGCGGCGATCGTCGACTCCCTCCATCCGTACACTATCCGGCGACGTCTGGACGC
AAACGCAAGCCCTCTGCCATCCCGAAGCAATGTCATGATCACGTAAAAAGGCAAAGATTG
GTTGTCAAAGAAGAAACCGTAACCCTAATAGCCAACGGAGCTGACGAGCTGCCCACATCA
AACAGATTCAGTTCAATTCAATGTTCACAACGACAGGAGAAGAAGCGGAAGAAGCTAAAA
AGAAGACAAAAATCAGCAACAACAGAGGCTCATCGCAGATGGGTTTTCTCTACTCGCGAT
TTATCCGATTACAAAGATAAGGTTGTTGTTGTTTCCTACAATATACTAGGTGTTGAAAAT
GCATCAAACCATCCAGATTTGTACTCTAAAGTCCCAACAAAATTGTTGGATTGGAACCGG
CGAAGAAAGCTCATTAATAAGGAGATCAATCAGTATAATCCAAGCATTCTTTGTTTTCAG
GAGGTTGACCGTTTCAATGATTTAAATAATCTTCTGAAAAAAGGGGGTTTTAAAGGAGTT
TATAAGGCTCGCACAGGTGAAGCATATGATGGGTGTGCTATGTTCTGGAAAGATGATCTC
TTTACTCTTTTGCATCAAGAGAACATAGAGTTTCAAAATTTTGGTCTCCGTCACAATGTT
GCTCAACTTTGTGTTTTGAAGATGAATCGAAATCAGTCCAATTCCGATGTAGATACTAAA
GCATCACAGATTCCACCTACTCGAAGTTTAATTGTTGGAAATATACATGTGCTCTTCAAC
CCAAATCGAGGAGACATCAAGCTAGGTCAGATGCGGCTGTTTCTCGAGAAGGCTCACAAA
CTATCACAAGAATGGGGCTGCATCCCTGTTGTACTTGCTGGAGACCTTAACAGCATGCCA
CAGAGTGCACTGTATCAGTTTCTGGCCTCATCTGAGTTGGACGTCCGGTTACATGATCGC
AGAAAAATTTCTGGGCAGGTGGAACATCAGTCACAACATAGAGCCTACAGATATCAGAAT
GAAGATGCATCCAGATCAAGGCCATTGGTGCATAGATGGAGCAATGAAGAATTAAGACTT
GCCACTGGCAGTGATGGAGTTACTCATCTTCAGCACTGTTTAAAGCTATGTAGTGCATAC
TATGGCATTCCTGGAAGCTGTAGAACAAGAGATAATTATGGAGAACCCTTAGCAACGTCA
TACCACTCCAAGTTTATGGGAACTGTTGATTATATATGGCATACTGAGGAACTTGTTCCT
GTGAGAGTTCTTGAAACCTTACCTGTTGATATTTTAAGAAAAACAGGAGGGCTCCCAAGT
GAGAAATGGGGCAGCGACCATCTTGCTCTCGTGTGTGAATTGGCCTTTGCAGATGATGGC
AGTAGTTCTTGA

Peptide Sequence

PEP ID

VIT_17s0000g03760.t01
PEP Infomation

pep chromosome:12X:17:3695085:3714845:1 gene:VIT_17s0000g03760 transcript:VIT_17s0000g03760.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MRGGDRRLPPSVHYPATSGRKRKPSAIPKQCHDHVKRQRLVVKEETVTLIANGADELPTS
NRFSSIQCSQRQEKKRKKLKRRQKSATTEAHRRWVFSTRDLSDYKDKVVVVSYNILGVEN
ASNHPDLYSKVPTKLLDWNRRRKLINKEINQYNPSILCFQEVDRFNDLNNLLKKGGFKGV
YKARTGEAYDGCAMFWKDDLFTLLHQENIEFQNFGLRHNVAQLCVLKMNRNQSNSDVDTK
ASQIPPTRSLIVGNIHVLFNPNRGDIKLGQMRLFLEKAHKLSQEWGCIPVVLAGDLNSMP
QSALYQFLASSELDVRLHDRRKISGQVEHQSQHRAYRYQNEDASRSRPLVHRWSNEELRL
ATGSDGVTHLQHCLKLCSAYYGIPGSCRTRDNYGEPLATSYHSKFMGTVDYIWHTEELVP
VRVLETLPVDILRKTGGLPSEKWGSDHLALVCELAFADDGSSS

Transcript Sequence

Transcript ID

VIT_17s0000g03760.t01
Transcript Infomation

cdna chromosome:12X:17:3695085:3714845:1 gene:VIT_17s0000g03760 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TAAAGTTAGGGGTTGGGGGGAACAACGGCATTTGATAATCGACGGCCAAGCACAGAATAT
CCCCGCTCATGAGAGGCGGCGATCGTCGACTCCCTCCATCCGTACACTATCCGGCGACGT
CTGGACGCAAACGCAAGCCCTCTGCCATCCCGAAGCAATGTCATGATCACGTAAAAAGGC
AAAGATTGGTTGTCAAAGAAGAAACCGTAACCCTAATAGCCAACGGAGCTGACGAGCTGC
CCACATCAAACAGATTCAGTTCAATTCAATGTTCACAACGACAGGAGAAGAAGCGGAAGA
AGCTAAAAAGAAGACAAAAATCAGCAACAACAGAGGCTCATCGCAGATGGGTTTTCTCTA
CTCGCGATTTATCCGATTACAAAGATAAGGTTGTTGTTGTTTCCTACAATATACTAGGTG
TTGAAAATGCATCAAACCATCCAGATTTGTACTCTAAAGTCCCAACAAAATTGTTGGATT
GGAACCGGCGAAGAAAGCTCATTAATAAGGAGATCAATCAGTATAATCCAAGCATTCTTT
GTTTTCAGGAGGTTGACCGTTTCAATGATTTAAATAATCTTCTGAAAAAAGGGGGTTTTA
AAGGAGTTTATAAGGCTCGCACAGGTGAAGCATATGATGGGTGTGCTATGTTCTGGAAAG
ATGATCTCTTTACTCTTTTGCATCAAGAGAACATAGAGTTTCAAAATTTTGGTCTCCGTC
ACAATGTTGCTCAACTTTGTGTTTTGAAGATGAATCGAAATCAGTCCAATTCCGATGTAG
ATACTAAAGCATCACAGATTCCACCTACTCGAAGTTTAATTGTTGGAAATATACATGTGC
TCTTCAACCCAAATCGAGGAGACATCAAGCTAGGTCAGATGCGGCTGTTTCTCGAGAAGG
CTCACAAACTATCACAAGAATGGGGCTGCATCCCTGTTGTACTTGCTGGAGACCTTAACA
GCATGCCACAGAGTGCACTGTATCAGTTTCTGGCCTCATCTGAGTTGGACGTCCGGTTAC
ATGATCGCAGAAAAATTTCTGGGCAGGTGGAACATCAGTCACAACATAGAGCCTACAGAT
ATCAGAATGAAGATGCATCCAGATCAAGGCCATTGGTGCATAGATGGAGCAATGAAGAAT
TAAGACTTGCCACTGGCAGTGATGGAGTTACTCATCTTCAGCACTGTTTAAAGCTATGTA
GTGCATACTATGGCATTCCTGGAAGCTGTAGAACAAGAGATAATTATGGAGAACCCTTAG
CAACGTCATACCACTCCAAGTTTATGGGAACTGTTGATTATATATGGCATACTGAGGAAC
TTGTTCCTGTGAGAGTTCTTGAAACCTTACCTGTTGATATTTTAAGAAAAACAGGAGGGC
TCCCAAGTGAGAAATGGGGCAGCGACCATCTTGCTCTCGTGTGTGAATTGGCCTTTGCAG
ATGATGGCAGTAGTTCTTGACCTAGTTCAAGTCCTCTGATTGGCATTTATTGGAAGCTAG
TGTACAAAATGCCATTTTATGCGGTTTCTTGGAGCTGGGCTGCTGCTCTTAAGTTTCCAT
TGTAAGTTATATGGCGCAAGCAATGTGATTCACACTACACTATAAACATCAAGCATCTGA
ATGCACCCTGATGCATGGTATGAGTTCCTCCTCCTACCACATCTTATATTTATGGATATG
ATAACCATGTGCCC