Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g03710.t01
CDS Infomation

cds chromosome:12X:17:3638197:3654846:-1 gene:VIT_17s0000g03710 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATTCAGGAATTGAAGTTGTTGAAGAAAGATTGAACTCTTTCACTGGTCAGCTCCAA
TCTGAGTGTGCCATTCTTGAAAGAATTGTATACAAGAACAAGAATCAACACCGTAGATGC
TCCTACTTTCAATACCTTCTAAAGGTGAGGAGGGACTTGAAACTCCTGCAATCAGCTAAC
TTGGAAGAGCTTTTGAGTTCATGCTTTCAAGTTATCCATGGAAAGAAACCCCAACAAAAG
GTCCATCTTTTAGAAAGTTTAAAGAAGAGAAAAGGCGATGGTGGTAAATATAATTTTATG
GAGCGGCTTCTGGGAGCTGCACGTTTACTATCTGAAATGGTGGAACCGATGTTGAAGGCA
GCTATTGAGATATCTACTTTGCTTGCTCGGTCATTTTTCATGGGATTCTCTCTAACAATC
TTGGCTCTTCTTGCTCGCCTTCGAGTTTTGGTTCAGCAAACACTACTTGATGTTGTTTCT
GTCTTCAACATGGTTTCTTCTCTCTCCCAAAAGGAGCAGTCTGTAAAATTGACTCAAGCA
GGAATTGAGTTTTTTAGGGAGTATTATCCAACAAATGAAGAATTTGTCACCCTTGAATGT
GTGTGGGAAGCGGATAAGTTTGTATTGCTTGAGAGGATCAAGAAAATCGAGATGAAAAAT
CTAGATGGGGATCCCAGAGAAGATGTTTCTCTGGGAACATCAACCATACAATATCAAAGT
ATTGAGGCTTTACTTGCAGATGATGAACTTGGCTCCAAGAAGACAGACATGCTCCACAGT
TCAGAAGAGGGTCCAACTCTGGTCAGTGAGGACAAATCTCTACTGGTGAATCCTTCCCTT
GAAAGTGATGATGGGAAGCGGGTTGAAGATAGTGTGCAAGTTAGCAATGGTTCAGAAGTT
GAAGGATCCTCTATTGAGAATCTCCTCCCAGAACAAGGCTTGCTTCCACACACAAGCTCA
TTTCCGAGTTCAAATCCTTTAAAACGTAAATTTGATTCAAGCAATAAAGTGGCTTTTGTC
TCCGTGAAGAGACCTACAGTATCAGCAGCTACCACACCCTTTTTCCCTGTTGAGGAAATC
AAAAGTGACAATGAAAACAAGGAAGATCCTTTTTTCAGTCTGCTTACTGGTGGAAACATA
AAGGATAGCATCTTCTAA

Peptide Sequence

PEP ID

VIT_17s0000g03710.t01
PEP Infomation

pep chromosome:12X:17:3638197:3654846:-1 gene:VIT_17s0000g03710 transcript:VIT_17s0000g03710.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDSGIEVVEERLNSFTGQLQSECAILERIVYKNKNQHRRCSYFQYLLKVRRDLKLLQSAN
LEELLSSCFQVIHGKKPQQKVHLLESLKKRKGDGGKYNFMERLLGAARLLSEMVEPMLKA
AIEISTLLARSFFMGFSLTILALLARLRVLVQQTLLDVVSVFNMVSSLSQKEQSVKLTQA
GIEFFREYYPTNEEFVTLECVWEADKFVLLERIKKIEMKNLDGDPREDVSLGTSTIQYQS
IEALLADDELGSKKTDMLHSSEEGPTLVSEDKSLLVNPSLESDDGKRVEDSVQVSNGSEV
EGSSIENLLPEQGLLPHTSSFPSSNPLKRKFDSSNKVAFVSVKRPTVSAATTPFFPVEEI
KSDNENKEDPFFSLLTGGNIKDSIF

Transcript Sequence

Transcript ID

VIT_17s0000g03710.t01
Transcript Infomation

cdna chromosome:12X:17:3638197:3654846:-1 gene:VIT_17s0000g03710 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGTTTCTGTTTACACAAATGCAACGAATCATTTAGCCTTCAAACGCTGCGTTTCAGTCGA
TCTCTGAGTTCAAGCTTCAGAGTACACCGGTCACTGCACAAAAGCATTCAACTTCTCGTT
ACACAAAAGAATTCAATCATCCTTAGACGATCGATCTCTGTGTTAAAGTCCCATGCATGG
ATTCAGGAATTGAAGTTGTTGAAGAAAGATTGAACTCTTTCACTGGTCAGCTCCAATCTG
AGTGTGCCATTCTTGAAAGAATTGTATACAAGAACAAGAATCAACACCGTAGATGCTCCT
ACTTTCAATACCTTCTAAAGGTGAGGAGGGACTTGAAACTCCTGCAATCAGCTAACTTGG
AAGAGCTTTTGAGTTCATGCTTTCAAGTTATCCATGGAAAGAAACCCCAACAAAAGGTCC
ATCTTTTAGAAAGTTTAAAGAAGAGAAAAGGCGATGGTGGTAAATATAATTTTATGGAGC
GGCTTCTGGGAGCTGCACGTTTACTATCTGAAATGGTGGAACCGATGTTGAAGGCAGCTA
TTGAGATATCTACTTTGCTTGCTCGGTCATTTTTCATGGGATTCTCTCTAACAATCTTGG
CTCTTCTTGCTCGCCTTCGAGTTTTGGTTCAGCAAACACTACTTGATGTTGTTTCTGTCT
TCAACATGGTTTCTTCTCTCTCCCAAAAGGAGCAGTCTGTAAAATTGACTCAAGCAGGAA
TTGAGTTTTTTAGGGAGTATTATCCAACAAATGAAGAATTTGTCACCCTTGAATGTGTGT
GGGAAGCGGATAAGTTTGTATTGCTTGAGAGGATCAAGAAAATCGAGATGAAAAATCTAG
ATGGGGATCCCAGAGAAGATGTTTCTCTGGGAACATCAACCATACAATATCAAAGTATTG
AGGCTTTACTTGCAGATGATGAACTTGGCTCCAAGAAGACAGACATGCTCCACAGTTCAG
AAGAGGGTCCAACTCTGGTCAGTGAGGACAAATCTCTACTGGTGAATCCTTCCCTTGAAA
GTGATGATGGGAAGCGGGTTGAAGATAGTGTGCAAGTTAGCAATGGTTCAGAAGTTGAAG
GATCCTCTATTGAGAATCTCCTCCCAGAACAAGGCTTGCTTCCACACACAAGCTCATTTC
CGAGTTCAAATCCTTTAAAACGTAAATTTGATTCAAGCAATAAAGTGGCTTTTGTCTCCG
TGAAGAGACCTACAGTATCAGCAGCTACCACACCCTTTTTCCCTGTTGAGGAAATCAAAA
GTGACAATGAAAACAAGGAAGATCCTTTTTTCAGTCTGCTTACTGGTGGAAACATAAAGG
ATAGCATCTTCTAATTACTGATTAATTCA