Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g03690.t01
CDS Infomation

cds chromosome:12X:17:3623303:3624351:-1 gene:VIT_17s0000g03690 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribulose bisphosphate carboxylase small chain [Source:UniProtKB/TrEMBL;Acc:A5C718]
Sequence

ATGGCTTCCTCCATGGTCTCCTCCGCCACCGTGGCTACAATCAACCGTGCTACCCCGGCT
CAGGCCAACATGGTGGCCCCCTTCACCGGACTCAAATCTTTGTCGACTTTCCCTGGCACC
CGAAAAGCCAACACCGACATCACCTCCGTCGCTAGCAATGGTGGCCGAGTTCGCTGCATG
AAGGTTTGGCCTACAGAAGGGTTGATGAAGTTCGAGACTCTCTCATACCTCCCACCCCTC
AACGACGAACAGCTATGCAAGGAAGTGGATTACCTTCTCCGCATGAAATGGATTCCTTGC
TTGGAATTCACCAAGCTGTACCCATACCCCCACAGAGAGCACAACAGATCGCCAGGATAC
TACGACGGAAGGTACTGGACCATGTGGAAGCTGCCCATGTTCGGGTGCACTGACTCAGCC
CAGGTGATTAAGGAGGTGCAAGAAGCCAGGACCGCGTACCCTGACGCCCACATCCGAATC
ATCGGATTCGACAATAACCGCCAAGTGCAATGCATCGCTTTCATTGCCTACAAGCCCAGC
TGA

Peptide Sequence

PEP ID

VIT_17s0000g03690.t01
PEP Infomation

pep chromosome:12X:17:3623303:3624351:-1 gene:VIT_17s0000g03690 transcript:VIT_17s0000g03690.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribulose bisphosphate carboxylase small chain [Source:UniProtKB/TrEMBL;Acc:A5C718]
Sequence

MASSMVSSATVATINRATPAQANMVAPFTGLKSLSTFPGTRKANTDITSVASNGGRVRCM
KVWPTEGLMKFETLSYLPPLNDEQLCKEVDYLLRMKWIPCLEFTKLYPYPHREHNRSPGY
YDGRYWTMWKLPMFGCTDSAQVIKEVQEARTAYPDAHIRIIGFDNNRQVQCIAFIAYKPS

Transcript Sequence

Transcript ID

VIT_17s0000g03690.t01
Transcript Infomation

cdna chromosome:12X:17:3623303:3624351:-1 gene:VIT_17s0000g03690 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribulose bisphosphate carboxylase small chain [Source:UniProtKB/TrEMBL;Acc:A5C718]
Sequence

CAGTGGTGGTGTTAGCAAAACCCAAAAGGCGAAAATGGCTTCCTCCATGGTCTCCTCCGC
CACCGTGGCTACAATCAACCGTGCTACCCCGGCTCAGGCCAACATGGTGGCCCCCTTCAC
CGGACTCAAATCTTTGTCGACTTTCCCTGGCACCCGAAAAGCCAACACCGACATCACCTC
CGTCGCTAGCAATGGTGGCCGAGTTCGCTGCATGAAGGTTTGGCCTACAGAAGGGTTGAT
GAAGTTCGAGACTCTCTCATACCTCCCACCCCTCAACGACGAACAGCTATGCAAGGAAGT
GGATTACCTTCTCCGCATGAAATGGATTCCTTGCTTGGAATTCACCAAGCTGTACCCATA
CCCCCACAGAGAGCACAACAGATCGCCAGGATACTACGACGGAAGGTACTGGACCATGTG
GAAGCTGCCCATGTTCGGGTGCACTGACTCAGCCCAGGTGATTAAGGAGGTGCAAGAAGC
CAGGACCGCGTACCCTGACGCCCACATCCGAATCATCGGATTCGACAATAACCGCCAAGT
GCAATGCATCGCTTTCATTGCCTACAAGCCCAGCTGATCCTGTTTCCGCAATATTTGATG
TCCATGTTTTTTCACTCTCATGTTTAGGACCCTTGTGGAATTTTATTTTTTGTGTCTGTT
TTTTGTTTTTTCTTTGCTTATTCGAAGTCTCCGATGGAGTAATGCAATGGAATATTGTAT
GAGGATATGGTGTATCATCATCGTCGGATGTTTTAATCGTTGGTGGCCATGTAAACGCCA
CCACTTTTAATAATACCTATGCTCTTTGCTTTCAGCT