Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g03670.t01
CDS Infomation

cds chromosome:12X:17:3607716:3610714:1 gene:VIT_17s0000g03670 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCATATTCTAAAGAAGCTCTTGCTAGGCTGTTCTACAATGTCTCCAGTTCTTTACAG
CTTCTCTTCCTCTTCTTCTTCTTCTCCTCCATTTTGCTTGCAAAGCTCCTCCACTTCCTC
TGCAACCACCCAATATTCCAAAGGACCCAACATGGATCTGCAGTTGGATTGTTTTTGGAC
GACGAAGAAGAGGAGGACATATATTTTCATGAGGAGGAGTGCATGGAGAAAGATGATCAC
CTGGTGGCCGACATAGTTGATGGTGGAGAATCACTTCTGTTTTTGCCTGTCAACCGTCCT
GTGAAGGATCAAGATCTTGAGCATCATGAAGAAACCATAAGCAGTAGTACTACTCCTCGT
GGCGATTACAACTACTTCTTCCACCAAGAAGAGTCAAGTGATGATCATAACTCACTGGTT
CAAGAATCAGAAGTACATGATGACAAGGAAGATGAGGCTGAAGAAGAGATCCCAACATCA
GATACTGATGCTGATGCGGTATACAATTTTGGCCCCAATGAAGGTGACCCCACCTCGCCG
ATAACCATCAATCTAACCAAAAGTGGCTTGGTGGCCGATGACGAAACCCATGACGAGAAA
CGCGACGAGGAAGATTCCAAAGGTGGTAAGGATAAAATTGAAGATGGGAAGGTGGAAGAG
ACTACAAATTTCACTAAAGATGAAAAGTTCTTAATTTTTGCGCCCCCTCAATCGGAGGCT
AAGAAGTTTCATGTCCAAGAAAAGGATAATGAAGAGACTTGTGGCGACTCGTATACCGTT
GGATCTACTTCTAAGAGCTCGTCTGAATGGAGAAGTTCCATTAATTTCAGGGATTCAGGG
ACAGAAGATCCATTTTCGTCCTCTTCCCGGAGGAGTTGCCCCAAGTGGGAATCTTACACT
GTGTTTCAGAAGTATGATGAAGAGATGACATTCTTAGATAGGATCAGCGCCCAAAAGCTT
CAGGAAACAGGGAGGATTGCTCATAAATTGGGAACAATCAACAAGAGATCATCAGATACC
CATCAGAACCCGTATCATGAACTAGAAGCTGCTTATGTAGCACAAATTTGCTTAACATGG
GAAGCTCTTAATTGGAACTACAAGAACTTTCAGCGCCTGAGAGCTTCGCGTCGTGAATGT
GACCCCGGCAGTCCTGCTCATATTGCCCAGCAGTTTCAGCAATTCCAAGTGCTTTTACAG
CGGTACATTGAGAATGAGCCCTATGAGCATGGCAAGAGACCTGAGATTTATGCTAGGATG
AGAATTTTGGCACCAAAGCTGCTCCAAGTGCCAGAATATCGAGATTCTGAAGATGATCAA
AAGGATGAAAGTCTGAAGTCAAGAATTTCGTCAGATTCATTTCTTATTATATTAGAAGAG
GGAATAAGAACATTCATGAATTTTCTCAAGGGGGATAGGGAGAAACCTTGCCAGATCATA
GCAGCTTTGTTCAAGAGGAACCGAAAAGGTTTGGTTGATCCAACTCTTCTACATCTGATG
AAGAAAGCAAATCAGAAGAAGAAGTTAAGGCTCAAAGATCTCCGCAGAACTGGCAAGTGC
TTAAGGAAAAGAAGGTTAAAGGAGGAGGAAGAAATGGAGATTCTGATGGGACTGATAGAC
ATAAAAGTGGTGTCTAGGGTTTTGAGAATGAGTGACATAACAGAAGAGCAATTACACTGG
TGTGAAGAAAAGATGAGCAAAGTGAGAGTTTTGGAAGGGAAGCTGCAAAGAGATTCCTCA
CCACTTTTCTTCCCTGCACACTGA

Peptide Sequence

PEP ID

VIT_17s0000g03670.t01
PEP Infomation

pep chromosome:12X:17:3607716:3610714:1 gene:VIT_17s0000g03670 transcript:VIT_17s0000g03670.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPYSKEALARLFYNVSSSLQLLFLFFFFSSILLAKLLHFLCNHPIFQRTQHGSAVGLFLD
DEEEEDIYFHEEECMEKDDHLVADIVDGGESLLFLPVNRPVKDQDLEHHEETISSSTTPR
GDYNYFFHQEESSDDHNSLVQESEVHDDKEDEAEEEIPTSDTDADAVYNFGPNEGDPTSP
ITINLTKSGLVADDETHDEKRDEEDSKGGKDKIEDGKVEETTNFTKDEKFLIFAPPQSEA
KKFHVQEKDNEETCGDSYTVGSTSKSSSEWRSSINFRDSGTEDPFSSSSRRSCPKWESYT
VFQKYDEEMTFLDRISAQKLQETGRIAHKLGTINKRSSDTHQNPYHELEAAYVAQICLTW
EALNWNYKNFQRLRASRRECDPGSPAHIAQQFQQFQVLLQRYIENEPYEHGKRPEIYARM
RILAPKLLQVPEYRDSEDDQKDESLKSRISSDSFLIILEEGIRTFMNFLKGDREKPCQII
AALFKRNRKGLVDPTLLHLMKKANQKKKLRLKDLRRTGKCLRKRRLKEEEEMEILMGLID
IKVVSRVLRMSDITEEQLHWCEEKMSKVRVLEGKLQRDSSPLFFPAH

Transcript Sequence

Transcript ID

VIT_17s0000g03670.t01
Transcript Infomation

cdna chromosome:12X:17:3607716:3610714:1 gene:VIT_17s0000g03670 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCATATTCTAAAGAAGCTCTTGCTAGGCTGTTCTACAATGTCTCCAGTTCTTTACAG
CTTCTCTTCCTCTTCTTCTTCTTCTCCTCCATTTTGCTTGCAAAGCTCCTCCACTTCCTC
TGCAACCACCCAATATTCCAAAGGACCCAACATGGATCTGCAGTTGGATTGTTTTTGGAC
GACGAAGAAGAGGAGGACATATATTTTCATGAGGAGGAGTGCATGGAGAAAGATGATCAC
CTGGTGGCCGACATAGTTGATGGTGGAGAATCACTTCTGTTTTTGCCTGTCAACCGTCCT
GTGAAGGATCAAGATCTTGAGCATCATGAAGAAACCATAAGCAGTAGTACTACTCCTCGT
GGCGATTACAACTACTTCTTCCACCAAGAAGAGTCAAGTGATGATCATAACTCACTGGTT
CAAGAATCAGAAGTACATGATGACAAGGAAGATGAGGCTGAAGAAGAGATCCCAACATCA
GATACTGATGCTGATGCGGTATACAATTTTGGCCCCAATGAAGGTGACCCCACCTCGCCG
ATAACCATCAATCTAACCAAAAGTGGCTTGGTGGCCGATGACGAAACCCATGACGAGAAA
CGCGACGAGGAAGATTCCAAAGGTGGTAAGGATAAAATTGAAGATGGGAAGGTGGAAGAG
ACTACAAATTTCACTAAAGATGAAAAGTTCTTAATTTTTGCGCCCCCTCAATCGGAGGCT
AAGAAGTTTCATGTCCAAGAAAAGGATAATGAAGAGACTTGTGGCGACTCGTATACCGTT
GGATCTACTTCTAAGAGCTCGTCTGAATGGAGAAGTTCCATTAATTTCAGGGATTCAGGG
ACAGAAGATCCATTTTCGTCCTCTTCCCGGAGGAGTTGCCCCAAGTGGGAATCTTACACT
GTGTTTCAGAAGTATGATGAAGAGATGACATTCTTAGATAGGATCAGCGCCCAAAAGCTT
CAGGAAACAGGGAGGATTGCTCATAAATTGGGAACAATCAACAAGAGATCATCAGATACC
CATCAGAACCCGTATCATGAACTAGAAGCTGCTTATGTAGCACAAATTTGCTTAACATGG
GAAGCTCTTAATTGGAACTACAAGAACTTTCAGCGCCTGAGAGCTTCGCGTCGTGAATGT
GACCCCGGCAGTCCTGCTCATATTGCCCAGCAGTTTCAGCAATTCCAAGTGCTTTTACAG
CGGTACATTGAGAATGAGCCCTATGAGCATGGCAAGAGACCTGAGATTTATGCTAGGATG
AGAATTTTGGCACCAAAGCTGCTCCAAGTGCCAGAATATCGAGATTCTGAAGATGATCAA
AAGGATGAAAGTCTGAAGTCAAGAATTTCGTCAGATTCATTTCTTATTATATTAGAAGAG
GGAATAAGAACATTCATGAATTTTCTCAAGGGGGATAGGGAGAAACCTTGCCAGATCATA
GCAGCTTTGTTCAAGAGGAACCGAAAAGGTTTGGTTGATCCAACTCTTCTACATCTGATG
AAGAAAGCAAATCAGAAGAAGAAGTTAAGGCTCAAAGATCTCCGCAGAACTGGCAAGTGC
TTAAGGAAAAGAAGGTTAAAGGAGGAGGAAGAAATGGAGATTCTGATGGGACTGATAGAC
ATAAAAGTGGTGTCTAGGGTTTTGAGAATGAGTGACATAACAGAAGAGCAATTACACTGG
TGTGAAGAAAAGATGAGCAAAGTGAGAGTTTTGGAAGGGAAGCTGCAAAGAGATTCCTCA
CCACTTTTCTTCCCTGCACACTGACCCCACCATAGATTGGGTATTTGTTGCTTGATGACT
AGACCATGAATGTGCGGTGACTGCATGCAGATGAATATCCTAAGGCAGACACACCCTTTT
GTAAATACTGTAAAGAAAAATGAGAGGAAGGGGACCCACAAATCAAAGCCATGACATGTG
GGTGACATAGATTTTGAAGATATGGAATCCATGAAAGAAAAGATGGGTTGGCTCTCTGAT
TTCATGAACATTGAAAGTGAAAAGAGCTGGGACAAAGCAAGGAACACGAAGATAGAGACG
AGGTAGCTTTAGTTTGCTTTATCTTTTGAATTAGGGTTTATCTATAAGGGTTTTGAGCTG
AATCAAAAGAGAGAGATTTGGGCAAAGCTGCTGCTACACATGCAGTGGAATAAAAAGGTG
GCACATGGTACACTCAAAGGGTGGGAGCCCGAGCTTCATTTGGTACCACTTTCTTTGGGG
AAAAGATGAATAAATAAATAATCAACCATGTAAGGTGTATTCAGACTTCAGAGAGTTGCG
TCCCTCTCATGATTTCTATAAAAAGTTAATCTTGTAGTTGGGTTATCATGACCTTCATTG
ACTTCCATCATCATTAATAATCTTTGGA