Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g03550.t01
CDS Infomation

cds chromosome:12X:17:3428358:3429670:-1 gene:VIT_17s0000g03550 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAACTTACTCAACATGGTTTCTTAGAGGAGTTCCTAGATCTAAGAGGAGAAACTTGG
AACACATATCCTACTATGGATGAGTTCATTCCTGATGGTTGGAACTTTGATACTTTCAAT
GAGAATGTAGTTTTTGCTACAACAAATCCTTCATTGGAAGGATTTTCCATGTCAAAAGGG
CCTGCATTTGAATATCCATTTAATGAAATTCATCCTTCTGTCGGTGGATTTACTGTACCA
GAGATTGATTCATTACATGGCAAGAACATGATGCTACAATTTCCAATTCAGTACCCATCA
GTGGTGAAGGATGAAGAGATCAGCCTACTCAACAATAGTCCTCACATTGTGGAAGAAAGG
GATAATAGCTGCAAATTTGAGATGGAACAAGCTGCCAATACTCCAGTTTTCAGCACAAGT
CCCTTTGGAGAGAGAAAGGCTCGAGTTAAGAAGATGGAGGGGCAGCCTTCAAAGAATCTA
ATGGCAGAAAGAAGGCGAAGGAAGCGACTGAATGATCGCCTTTCCATGCTCAGATCAATT
GTTCCAAAAATAAGCAAGATGGACAGAACATCTATTCTTGGAGATGCCATAGATTATATG
AGAGAGCTCCTAGAAAGAATGAATAAGTTGCAAGAAGAACAAATGCAAGCAGGCACAAGC
AGAACCAACTCACCAGGCATCTTCAAGGAGCTAAAGCCAAATGGTATGATCACGAAAAAT
TCTCCAAAGTTTGATGTGGAAAGAAGAAATTTAGATACCCGGATTGAGATTTGCTGTGCA
GAAAAACAAGGATTGTTGCTGTCAACTGTGAGCACGCTAAAAGCACTAGGACTTGAGATT
CAACAGTGTGTCATAAGTTGCTTCAATGAATTTTCAGTGCAAGCTTCCTGTTCAGATGCA
GCAGAGCAGCAAACAATGCTAAATTCTGAAGATATAAAGCAAGCATTATTCAGAAACGCA
GGTTATTGA

Peptide Sequence

PEP ID

VIT_17s0000g03550.t01
PEP Infomation

pep chromosome:12X:17:3428358:3429670:-1 gene:VIT_17s0000g03550 transcript:VIT_17s0000g03550.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MELTQHGFLEEFLDLRGETWNTYPTMDEFIPDGWNFDTFNENVVFATTNPSLEGFSMSKG
PAFEYPFNEIHPSVGGFTVPEIDSLHGKNMMLQFPIQYPSVVKDEEISLLNNSPHIVEER
DNSCKFEMEQAANTPVFSTSPFGERKARVKKMEGQPSKNLMAERRRRKRLNDRLSMLRSI
VPKISKMDRTSILGDAIDYMRELLERMNKLQEEQMQAGTSRTNSPGIFKELKPNGMITKN
SPKFDVERRNLDTRIEICCAEKQGLLLSTVSTLKALGLEIQQCVISCFNEFSVQASCSDA
AEQQTMLNSEDIKQALFRNAGY

Transcript Sequence

Transcript ID

VIT_17s0000g03550.t01
Transcript Infomation

cdna chromosome:12X:17:3428358:3429670:-1 gene:VIT_17s0000g03550 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGAGAGACATGGAACTTACTCAACATGGTTTCTTAGAGGAGTTCCTAGATCTAAGAG
GAGAAACTTGGAACACATATCCTACTATGGATGAGTTCATTCCTGATGGTTGGAACTTTG
ATACTTTCAATGAGAATGTAGTTTTTGCTACAACAAATCCTTCATTGGAAGGATTTTCCA
TGTCAAAAGGGCCTGCATTTGAATATCCATTTAATGAAATTCATCCTTCTGTCGGTGGAT
TTACTGTACCAGAGATTGATTCATTACATGGCAAGAACATGATGCTACAATTTCCAATTC
AGTACCCATCAGTGGTGAAGGATGAAGAGATCAGCCTACTCAACAATAGTCCTCACATTG
TGGAAGAAAGGGATAATAGCTGCAAATTTGAGATGGAACAAGCTGCCAATACTCCAGTTT
TCAGCACAAGTCCCTTTGGAGAGAGAAAGGCTCGAGTTAAGAAGATGGAGGGGCAGCCTT
CAAAGAATCTAATGGCAGAAAGAAGGCGAAGGAAGCGACTGAATGATCGCCTTTCCATGC
TCAGATCAATTGTTCCAAAAATAAGCAAGATGGACAGAACATCTATTCTTGGAGATGCCA
TAGATTATATGAGAGAGCTCCTAGAAAGAATGAATAAGTTGCAAGAAGAACAAATGCAAG
CAGGCACAAGCAGAACCAACTCACCAGGCATCTTCAAGGAGCTAAAGCCAAATGGTATGA
TCACGAAAAATTCTCCAAAGTTTGATGTGGAAAGAAGAAATTTAGATACCCGGATTGAGA
TTTGCTGTGCAGAAAAACAAGGATTGTTGCTGTCAACTGTGAGCACGCTAAAAGCACTAG
GACTTGAGATTCAACAGTGTGTCATAAGTTGCTTCAATGAATTTTCAGTGCAAGCTTCCT
GTTCAGATGCAGCAGAGCAGCAAACAATGCTAAATTCTGAAGATATAAAGCAAGCATTAT
TCAGAAACGCAGGTTATTGAAAACGATG