Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g03500.t01
CDS Infomation

cds chromosome:12X:17:3361945:3388600:-1 gene:VIT_17s0000g03500 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCGGCCTTCTTCGGGAGGAATCAACATCGCCGCCAGTGCTCAGAAACTCGATGTCGAT
AATCGGATTTCCCTCCGTTACTACTACCGTATCGCTGATAATATCCTCAAACAGGCTGAC
ATATTTCGAGAAGAGAAGAACATTATAGATCTCTATATTATGCTTCTAAGGTTTTCAAGT
TTAACTTCTGAGACTATACCATGCCATCGTGATTATAAGGCATCTCTACAAAGCAAAAAG
AATTATTTGAAGAAGAACTTATTGAGAGCCCTGTGTGAGTTGGAGGAATTGAAGCCAGCT
GTGCGACAGAAGATTGATGAATTGAACCAGAAACATACATATCAAGTAAACAGATGGGGT
GCTGATTCCTCACTGGAATGGCCTCATGTTAGGAAACAAACTTTGACGAAACATGAGATG
ACAAAGACACCACGACCCACTGCTCGAGATTTTGAATATCAAGGTTCAAAGATTCAGCAG
TTCTCGCGAGCCAAGCCAGTGGAAGAGCAATTCCGCAGACTATCTGTTGGTATCCTGCGC
CCAAGGGAGGAAACTCTATCCAGACACTCTATTTTGGGTCCAAATGGACTTCATGGGCAG
TGGCAGCCACCTACCATTGATAAAAGGGTCCAATATCCAAGCAATTTAGATTTGACTCCA
GTTCAATTTCCAAGTCTGCAGCATCATGTGGAGGATGGACTTATGAATAACAATGAAGCT
AGCAGCTCAGAACATGAGCAATCTAGTTTGGAATCAGTCCTTACACTGAACGAGGATAAT
CAGATTCATCCTGCTGAGGAACTGGGTTCCTTGATTTCTTTTGAAACCACAGAAACTCCT
CATACAGAGATTATCAGACAGCCTTCTCCTCCACCTGTTCTGGCAGACGTACAAGATTTG
ATCCCAGAGACTCCCACCCAAGTTAGTGAGGTAAATGGCCAAATGGAGACCCCATCAACG
GATGGGTTAGTTTGTTCTGAAGCTCCCCTCGAAATGCACATTTCAACTGTATTGATGGAA
AGCTTCTTGAAGCTTGCTAAGTCGAACACTGTCAGGAATTTGGAAACTTGTGGTATCCTT
GCAGGTTCACTTAAGAACAGAAAATTTTATGTCACAGCTCTCATTATTCCGAAGCAGGAG
TCAACATCAGATTCATGTCAGACCACAAATGAAGAGGAAATTTTTGAAGTGCAGGATAAG
CAATCCCTCTTCCCTCTTGGGTGGATACATACTCATCCTACCCAGTCGTGTTTCATGTCT
TCTGTTGATCTTCATACCCATTACTCATATCAGACTATGCTACCGGAAGCCATAGCAATT
GTCATGGCACCAAAGGATGCTTCAAAAAAGCATGGCATTTTCCGCCTGACAACTCCAGGT
GGCATGTCAGTCATAAGACACTGCGACCAACGTGGCTTTCATCCACATCATTCTCCTTCG
GATGGTGGGCCCATCTACAAAAGCTGTACAGATGTTTATATGAATCCCAATATACATTTT
GATGTCATTGATCTTCGGTGA

Peptide Sequence

PEP ID

VIT_17s0000g03500.t01
PEP Infomation

pep chromosome:12X:17:3361945:3388600:-1 gene:VIT_17s0000g03500 transcript:VIT_17s0000g03500.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MRPSSGGINIAASAQKLDVDNRISLRYYYRIADNILKQADIFREEKNIIDLYIMLLRFSS
LTSETIPCHRDYKASLQSKKNYLKKNLLRALCELEELKPAVRQKIDELNQKHTYQVNRWG
ADSSLEWPHVRKQTLTKHEMTKTPRPTARDFEYQGSKIQQFSRAKPVEEQFRRLSVGILR
PREETLSRHSILGPNGLHGQWQPPTIDKRVQYPSNLDLTPVQFPSLQHHVEDGLMNNNEA
SSSEHEQSSLESVLTLNEDNQIHPAEELGSLISFETTETPHTEIIRQPSPPPVLADVQDL
IPETPTQVSEVNGQMETPSTDGLVCSEAPLEMHISTVLMESFLKLAKSNTVRNLETCGIL
AGSLKNRKFYVTALIIPKQESTSDSCQTTNEEEIFEVQDKQSLFPLGWIHTHPTQSCFMS
SVDLHTHYSYQTMLPEAIAIVMAPKDASKKHGIFRLTTPGGMSVIRHCDQRGFHPHHSPS
DGGPIYKSCTDVYMNPNIHFDVIDLR

Transcript Sequence

Transcript ID

VIT_17s0000g03500.t01
Transcript Infomation

cdna chromosome:12X:17:3361945:3388600:-1 gene:VIT_17s0000g03500 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GCGCTCTTTCTCGCTCGACTCCGAGCCCAAGTCGCCATTGACGACGCTTCCCTGAAGCTT
CCGCATCCGAGCGTTAGGGTTCCGTTCCGATCTGGAAAAATGTTGTTTTTGTAGAAAGCA
AGAGGAAGGAAAAGAAAATAAAAGGTCACTGCGACGATGCGGCCTTCTTCGGGAGGAATC
AACATCGCCGCCAGTGCTCAGAAACTCGATGTCGATAATCGGATTTCCCTCCGTTACTAC
TACCGTATCGCTGATAATATCCTCAAACAGGCTGACATATTTCGAGAAGAGAAGAACATT
ATAGATCTCTATATTATGCTTCTAAGGTTTTCAAGTTTAACTTCTGAGACTATACCATGC
CATCGTGATTATAAGGCATCTCTACAAAGCAAAAAGAATTATTTGAAGAAGAACTTATTG
AGAGCCCTGTGTGAGTTGGAGGAATTGAAGCCAGCTGTGCGACAGAAGATTGATGAATTG
AACCAGAAACATACATATCAAGTAAACAGATGGGGTGCTGATTCCTCACTGGAATGGCCT
CATGTTAGGAAACAAACTTTGACGAAACATGAGATGACAAAGACACCACGACCCACTGCT
CGAGATTTTGAATATCAAGGTTCAAAGATTCAGCAGTTCTCGCGAGCCAAGCCAGTGGAA
GAGCAATTCCGCAGACTATCTGTTGGTATCCTGCGCCCAAGGGAGGAAACTCTATCCAGA
CACTCTATTTTGGGTCCAAATGGACTTCATGGGCAGTGGCAGCCACCTACCATTGATAAA
AGGGTCCAATATCCAAGCAATTTAGATTTGACTCCAGTTCAATTTCCAAGTCTGCAGCAT
CATGTGGAGGATGGACTTATGAATAACAATGAAGCTAGCAGCTCAGAACATGAGCAATCT
AGTTTGGAATCAGTCCTTACACTGAACGAGGATAATCAGATTCATCCTGCTGAGGAACTG
GGTTCCTTGATTTCTTTTGAAACCACAGAAACTCCTCATACAGAGATTATCAGACAGCCT
TCTCCTCCACCTGTTCTGGCAGACGTACAAGATTTGATCCCAGAGACTCCCACCCAAGTT
AGTGAGGTAAATGGCCAAATGGAGACCCCATCAACGGATGGGTTAGTTTGTTCTGAAGCT
CCCCTCGAAATGCACATTTCAACTGTATTGATGGAAAGCTTCTTGAAGCTTGCTAAGTCG
AACACTGTCAGGAATTTGGAAACTTGTGGTATCCTTGCAGGTTCACTTAAGAACAGAAAA
TTTTATGTCACAGCTCTCATTATTCCGAAGCAGGAGTCAACATCAGATTCATGTCAGACC
ACAAATGAAGAGGAAATTTTTGAAGTGCAGGATAAGCAATCCCTCTTCCCTCTTGGGTGG
ATACATACTCATCCTACCCAGTCGTGTTTCATGTCTTCTGTTGATCTTCATACCCATTAC
TCATATCAGACTATGCTACCGGAAGCCATAGCAATTGTCATGGCACCAAAGGATGCTTCA
AAAAAGCATGGCATTTTCCGCCTGACAACTCCAGGTGGCATGTCAGTCATAAGACACTGC
GACCAACGTGGCTTTCATCCACATCATTCTCCTTCGGATGGTGGGCCCATCTACAAAAGC
TGTACAGATGTTTATATGAATCCCAATATACATTTTGATGTCATTGATCTTCGGTGATCA
CAATTGCAATGGTTGGGTGAGAAATGATCCACTCGTCCACCTTGCATATACAACTCTTTT
TTTCACTGTTTAGCCTGTAAAATGTTTAAGTACTTGTGTTCCAAAAGACTGAAGGAAAAT
TTTCCAGTTGACTCTACTATCCTCTGCTGCCATTGTTGGAACTGCAGCTTGCTTGCATCT
GGAAAT