Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g03410.t01
CDS Infomation

cds chromosome:12X:17:3280282:3282615:-1 gene:VIT_17s0000g03410 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAAGATGCGGAGTTGCTATGGAGAGCTTCAATGGTGCCTCGGGTTGGAGAGTTCCCC
TTCAAGCGTGTCCCCAAGATTGCATTCTTGTTTTTGACGAGAGGGTCATTGCCATTAGCT
CCTCTTTGGGAGATGTTCTTCAGAGGGCATGAGGCGCTGTATTCAATTTATGTGCATTCA
GATCCATCTTTCAATCGAACAGTGCCTAAAAGCTCTGTGTTTTATGGCCGGAGTATCCCC
AGTCAGGAAGTGCAGTGGGGAAACTTCAGCATGCTCGAAGCCGAGCGCCGTCTATTAGCC
AATGCACTTCTCGACATCTCCAACCACCGCTTTGTCCTCCTCTCTGAGTCATGCATTCCC
CTATTCAACTTCTCCACCATCTACTCTTACTTAATGGCCTCTACAAAATCCTTCATAGAG
GCCTATGATTTACCAGGGCCCGTGGGGCGTGCCCGTTACGACCATAGAATGAAGCCTATT
GTCACTATTGGGCAATGGCGAAAGGGGTCCCAGTGGTTCGAGATGGACCGTGGCCTAGCC
ATTGAGGTAATATCTGATCGGAAATATTTTGCAGTGTTCCGAGAATGTTGCGAGGCCTCG
TGTTATGCAGACGAGCACTACTTGCCTACACTTGTGAGTATCGAATTTTGGAGGAGGAAT
GCGAATAGGAGCTTGACATGGGTTGATTGGTCCAATGGCGGTGCCCACCCAGCTGGGTTT
TGGAGAAGAGATGTGACCGTCGAATTCTTACAGAGCTTGAGGACTGAAAGTCATTGCCAG
TACAATGGGAACAACACCGATATTTGCTTCTTGTTCGCTAGGAAATTCTTGCCTGGCACT
CTGAATAGGCTTTTGAGGGTTGCTCCTAAGCTCATGAAATTCAATTGA

Peptide Sequence

PEP ID

VIT_17s0000g03410.t01
PEP Infomation

pep chromosome:12X:17:3280282:3282615:-1 gene:VIT_17s0000g03410 transcript:VIT_17s0000g03410.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKDAELLWRASMVPRVGEFPFKRVPKIAFLFLTRGSLPLAPLWEMFFRGHEALYSIYVHS
DPSFNRTVPKSSVFYGRSIPSQEVQWGNFSMLEAERRLLANALLDISNHRFVLLSESCIP
LFNFSTIYSYLMASTKSFIEAYDLPGPVGRARYDHRMKPIVTIGQWRKGSQWFEMDRGLA
IEVISDRKYFAVFRECCEASCYADEHYLPTLVSIEFWRRNANRSLTWVDWSNGGAHPAGF
WRRDVTVEFLQSLRTESHCQYNGNNTDICFLFARKFLPGTLNRLLRVAPKLMKFN

Transcript Sequence

Transcript ID

VIT_17s0000g03410.t01
Transcript Infomation

cdna chromosome:12X:17:3280282:3282615:-1 gene:VIT_17s0000g03410 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CGAATTGGATTGAAAGAGTACGTGAAGCCCCCTAATGTTATACATGACATGAAAGATGCG
GAGTTGCTATGGAGAGCTTCAATGGTGCCTCGGGTTGGAGAGTTCCCCTTCAAGCGTGTC
CCCAAGATTGCATTCTTGTTTTTGACGAGAGGGTCATTGCCATTAGCTCCTCTTTGGGAG
ATGTTCTTCAGAGGGCATGAGGCGCTGTATTCAATTTATGTGCATTCAGATCCATCTTTC
AATCGAACAGTGCCTAAAAGCTCTGTGTTTTATGGCCGGAGTATCCCCAGTCAGGAAGTG
CAGTGGGGAAACTTCAGCATGCTCGAAGCCGAGCGCCGTCTATTAGCCAATGCACTTCTC
GACATCTCCAACCACCGCTTTGTCCTCCTCTCTGAGTCATGCATTCCCCTATTCAACTTC
TCCACCATCTACTCTTACTTAATGGCCTCTACAAAATCCTTCATAGAGGCCTATGATTTA
CCAGGGCCCGTGGGGCGTGCCCGTTACGACCATAGAATGAAGCCTATTGTCACTATTGGG
CAATGGCGAAAGGGGTCCCAGTGGTTCGAGATGGACCGTGGCCTAGCCATTGAGGTAATA
TCTGATCGGAAATATTTTGCAGTGTTCCGAGAATGTTGCGAGGCCTCGTGTTATGCAGAC
GAGCACTACTTGCCTACACTTGTGAGTATCGAATTTTGGAGGAGGAATGCGAATAGGAGC
TTGACATGGGTTGATTGGTCCAATGGCGGTGCCCACCCAGCTGGGTTTTGGAGAAGAGAT
GTGACCGTCGAATTCTTACAGAGCTTGAGGACTGAAAGTCATTGCCAGTACAATGGGAAC
AACACCGATATTTGCTTCTTGTTCGCTAGGAAATTCTTGCCTGGCACTCTGAATAGGCTT
TTGAGGGTTGCTCCTAAGCTCATGAAATTCAATTGAT