Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g03390.t01
CDS Infomation

cds chromosome:12X:17:3261882:3265509:-1 gene:VIT_17s0000g03390 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAGCTAAACGGTTTCACGAAGAATCGGGTTCTGACCCAGATCAACCTGACGAAAAG
CGGATCAGGGGGAGGCCTTCTCTGATGTCAGTATTTGGAGAAGTTCTTACGGGGAATTTC
GTGGAGAACTTCTGCACGACCTTGGAGCCAATGCTCAGAAAAGTGGTGGTTGAAGAGGTG
GAGAAGGGAATTCGCAAGTGCCGCTTCACCAAGTCTCCTTCTTTTCGAATCCAAGCACCA
GAACCATCAACCATGCGGCTGACTTTCACTAAGAACCTTTCACTTCCTATATTCACGGGG
ACCAAGATTGTGAATGATGAAAACAAACCTCTTCAACTCATTATTGAGGACACAAGTGGT
GATAATCAAAATATTCTGAGAGCTTTATCTCATTCTTTCAAAGTAGAGATAATTGTTCTC
GACGGTGACTTTCCTGGAGGAGACCGTGAGAACTGGTCCACCGAAGAATTCGATAACAGT
ATCGTGAAGGAGAGGGCCGGAAAGCGCCCGTTGCTGGCCGGAGATGTGCTTGTCACTATG
AGGGGTGGGGCTGCGGTGATCGGAGACATTGAGTTTACTGATAATTCGAGCTGGATTCGT
AGCAGAAACTTCAGGCTTGGTGCAAGAGTTGTTCCTGATAGCTGCAAGGAATTTAGGATT
CGTGAAGCCATTACAGAAGCCTTTGTGGTCAAAGACCACCGTGGAGAGTTGTACAAGAAG
CACTATCCACCAATGCTGGATGATGAAGTATGGCGTCTTGAGAAGATTGGAAAAGATGGG
GCTTTTCACAAGAAGCTAGCCTCGATAAACGTCAACAGTGTGCAAGACTTCTTGAAGCTG
TCAATCGTTGATCCAGCCAAACTAAAAAATATATTAGGTGTTGGGATGTCAGACAGAATG
TGGGAATCAACCATAAAGCATGCAAGAACATGCATGATAGGAAACAAACTGTATATTTAC
CGTGGATCCCATTTCACCATGACCTTGAATCCTATATGTACGGTTGTTAAGGTTAAGATT
AATGGGCAGACATATGCTACTCCTCAAGAACTATCCTCTATTAGGACCTATCTCGAGGAG
TTGGTTCGACAAGCATACGCTAATTGGGATTCATTAGAAGTTGTTGACGAAGTCCTGAAT
GAGACTGCTCTCCTAACTCAAGGTGAGCAGATAGTGGAGCAATATCCCAATCATGAGGTG
ACCATGGCAATACCATTTCAGCAACTTGGGAACCCAGCTGATACAAGTATGGGGGTGGGG
TACACAGATGTAGGATGTAGCCATTGGCAGATGAATCCTTTATACCATGGCATACCATTT
GATCATAGCAGCGTCCACTGTTACATCACACGCTCATCATCAGAAGGGGATGGAACATCT
TCTTCAGGGGCGCCTTTTCCAAATGGAAGTTGA

Peptide Sequence

PEP ID

VIT_17s0000g03390.t01
PEP Infomation

pep chromosome:12X:17:3261882:3265509:-1 gene:VIT_17s0000g03390 transcript:VIT_17s0000g03390.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAAKRFHEESGSDPDQPDEKRIRGRPSLMSVFGEVLTGNFVENFCTTLEPMLRKVVVEEV
EKGIRKCRFTKSPSFRIQAPEPSTMRLTFTKNLSLPIFTGTKIVNDENKPLQLIIEDTSG
DNQNILRALSHSFKVEIIVLDGDFPGGDRENWSTEEFDNSIVKERAGKRPLLAGDVLVTM
RGGAAVIGDIEFTDNSSWIRSRNFRLGARVVPDSCKEFRIREAITEAFVVKDHRGELYKK
HYPPMLDDEVWRLEKIGKDGAFHKKLASINVNSVQDFLKLSIVDPAKLKNILGVGMSDRM
WESTIKHARTCMIGNKLYIYRGSHFTMTLNPICTVVKVKINGQTYATPQELSSIRTYLEE
LVRQAYANWDSLEVVDEVLNETALLTQGEQIVEQYPNHEVTMAIPFQQLGNPADTSMGVG
YTDVGCSHWQMNPLYHGIPFDHSSVHCYITRSSSEGDGTSSSGAPFPNGS

Transcript Sequence

Transcript ID

VIT_17s0000g03390.t01
Transcript Infomation

cdna chromosome:12X:17:3261882:3265509:-1 gene:VIT_17s0000g03390 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATTAATGGCAGCTAAACGGTTTCACGAAGAATCGGGTTCTGACCCAGATCAACCTGACGA
AAAGCGGATCAGGGGGAGGCCTTCTCTGATGTCAGTATTTGGAGAAGTTCTTACGGGGAA
TTTCGTGGAGAACTTCTGCACGACCTTGGAGCCAATGCTCAGAAAAGTGGTGGTTGAAGA
GGTGGAGAAGGGAATTCGCAAGTGCCGCTTCACCAAGTCTCCTTCTTTTCGAATCCAAGC
ACCAGAACCATCAACCATGCGGCTGACTTTCACTAAGAACCTTTCACTTCCTATATTCAC
GGGGACCAAGATTGTGAATGATGAAAACAAACCTCTTCAACTCATTATTGAGGACACAAG
TGGTGATAATCAAAATATTCTGAGAGCTTTATCTCATTCTTTCAAAGTAGAGATAATTGT
TCTCGACGGTGACTTTCCTGGAGGAGACCGTGAGAACTGGTCCACCGAAGAATTCGATAA
CAGTATCGTGAAGGAGAGGGCCGGAAAGCGCCCGTTGCTGGCCGGAGATGTGCTTGTCAC
TATGAGGGGTGGGGCTGCGGTGATCGGAGACATTGAGTTTACTGATAATTCGAGCTGGAT
TCGTAGCAGAAACTTCAGGCTTGGTGCAAGAGTTGTTCCTGATAGCTGCAAGGAATTTAG
GATTCGTGAAGCCATTACAGAAGCCTTTGTGGTCAAAGACCACCGTGGAGAGTTGTACAA
GAAGCACTATCCACCAATGCTGGATGATGAAGTATGGCGTCTTGAGAAGATTGGAAAAGA
TGGGGCTTTTCACAAGAAGCTAGCCTCGATAAACGTCAACAGTGTGCAAGACTTCTTGAA
GCTGTCAATCGTTGATCCAGCCAAACTAAAAAATATATTAGGTGTTGGGATGTCAGACAG
AATGTGGGAATCAACCATAAAGCATGCAAGAACATGCATGATAGGAAACAAACTGTATAT
TTACCGTGGATCCCATTTCACCATGACCTTGAATCCTATATGTACGGTTGTTAAGGTTAA
GATTAATGGGCAGACATATGCTACTCCTCAAGAACTATCCTCTATTAGGACCTATCTCGA
GGAGTTGGTTCGACAAGCATACGCTAATTGGGATTCATTAGAAGTTGTTGACGAAGTCCT
GAATGAGACTGCTCTCCTAACTCAAGGTGAGCAGATAGTGGAGCAATATCCCAATCATGA
GGTGACCATGGCAATACCATTTCAGCAACTTGGGAACCCAGCTGATACAAGTATGGGGGT
GGGGTACACAGATGTAGGATGTAGCCATTGGCAGATGAATCCTTTATACCATGGCATACC
ATTTGATCATAGCAGCGTCCACTGTTACATCACACGCTCATCATCAGAAGGGGATGGAAC
ATCTTCTTCAGGGGCGCCTTTTCCAAATGGAAGTTGATGGAATATCATTATCCAACAATC
TTGGAGTTAATGAATGTCGTCTGGGGCAGAATCCTCTCGTTGCTGCCCAGGGTGAAATCT
TGTGGTGGCTTTGGTACTGAGATGTGATTTAAATGCTGTCCTTGTAAATGGTAAAAGAGA
AGCAAAGCTAG