Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g03300.t01
CDS Infomation

cds chromosome:12X:17:3169117:3179280:-1 gene:VIT_17s0000g03300 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTGGGGACTAGTTTGCAGCTTCGGCGGGCTCATGGTGAGGATCGGTTCTACATTCCC
GTGAAAGCGAGGAAGAATCAGAATCAACAAAGGCAACAGCTTCAGAAAGCTAAGAGTGAT
GTGACTGAGAAAACCGCTTCATCTGCAAAGAGCAAAACTGCGATTTCTGAGAATAGAAAC
CCTGAGGCATCCTCATGTTCGATTGCTAAGCCTTCTTCCGAGCCGTCCACAGCTCCTTCT
AACCTTGATCGGTTCTTGGAATCGACGACTCCTTCAGTGCCGGCGCAGTACTTCTCTAAG
ACTACAATGAGGGGATTGAGGACTTGTGACATTGAGTTTCAACATTACTTCACATTGGGT
GATTTGTGGGAATCTTTTATGGAATGGAGTGCGTATGGGGCAGGAGTGCCTTTGGTATTG
GATGGGAGTGATCCTGTTGTTCAATACTATGTCCCATATTTATCAGGCATACAATTATAT
GTTGAATCTACAACTTCGAATGCTAAATCAAGGCAAGCTGGCGAGGACAGTGATGGTGAC
TATTACAGGGACTCAAGTAGTGATGGAAGTAATGATTACGAATTTGAAAAAGGGATGAAG
TTTTCTAGGGAGCAGCAGGCTTGTCACCATCCAGCAAGTGATGTTCCTATTCAAATGGGC
AGGTTGTCTTTAAGGGAAAAACACAATACAATTCAAGAAGGCTTTTCTAGTGATGATAGT
GAGGCTAGCAATTCTCATGGTCACCTGATTTTTGAGTTTCTTGAGCACAATCCTCCTTAT
GGTCGAGAACCGTTCGCCGACAAGATACTAGATCTTGCACGTGAGTATCCTGAGCTGAAA
ACACTAAGAAGTTGTGACCTGCTGCCTGTCAGTTGGATGTCTGTGGCATGGTATCCCATA
TACCGAATACCCATGGGACAGACATTAAGGGATTTGGATGCTTGCTTTCTAACTTACCAT
TCTCTTTCTACACCCATGAAAGATGGTGGAAGCACACAAGCTGCAGTAGAGGTCTATCCC
AGTGAGATGGAGGGTATCCCAAAGATTTCATTACCTGTTTTTGGCATGGCTTCCTATAAG
TTCAAGGGTTCCATATGGAGGCAAAATGGGACATGTGAGCATCAACGGGTGAATTCTCTC
GTGCAGGCTGCAGATAACCGGTTAAGACTGCTGGAGGTCAATCACCCAGATTTCCAGTTC
TTTGTTTCACATGGTATGTACCGCAGGTGA

Peptide Sequence

PEP ID

VIT_17s0000g03300.t01
PEP Infomation

pep chromosome:12X:17:3169117:3179280:-1 gene:VIT_17s0000g03300 transcript:VIT_17s0000g03300.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLGTSLQLRRAHGEDRFYIPVKARKNQNQQRQQLQKAKSDVTEKTASSAKSKTAISENRN
PEASSCSIAKPSSEPSTAPSNLDRFLESTTPSVPAQYFSKTTMRGLRTCDIEFQHYFTLG
DLWESFMEWSAYGAGVPLVLDGSDPVVQYYVPYLSGIQLYVESTTSNAKSRQAGEDSDGD
YYRDSSSDGSNDYEFEKGMKFSREQQACHHPASDVPIQMGRLSLREKHNTIQEGFSSDDS
EASNSHGHLIFEFLEHNPPYGREPFADKILDLAREYPELKTLRSCDLLPVSWMSVAWYPI
YRIPMGQTLRDLDACFLTYHSLSTPMKDGGSTQAAVEVYPSEMEGIPKISLPVFGMASYK
FKGSIWRQNGTCEHQRVNSLVQAADNRLRLLEVNHPDFQFFVSHGMYRR

Transcript Sequence

Transcript ID

VIT_17s0000g03300.t01
Transcript Infomation

cdna chromosome:12X:17:3169117:3179280:-1 gene:VIT_17s0000g03300 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGCATTTCTCGCAAATTACTGTACCTGTTCTTTCTTTGATCTGATCACTGGCAACATATC
TTCGATTCTGCTTGCTTGGTCACTGAGAAACCTCCCAGGAAAGAAAAGAAACTCCAAATT
TTGAATTTTTTTTAATAGATTTGGAGAACTATGAGAAACTGAAATCTTAGCTCAACCGCG
AGTGATAGTGAACAGAGGTATTATTATTATTTTTTAAATTTTGGGAGCCAGAATTTTCTG
TTCTTCTCCTCCGTTTCCTGCCGAAAGGGTTTTGTGGCTGTGGAGATGTTGGGGACTAGT
TTGCAGCTTCGGCGGGCTCATGGTGAGGATCGGTTCTACATTCCCGTGAAAGCGAGGAAG
AATCAGAATCAACAAAGGCAACAGCTTCAGAAAGCTAAGAGTGATGTGACTGAGAAAACC
GCTTCATCTGCAAAGAGCAAAACTGCGATTTCTGAGAATAGAAACCCTGAGGCATCCTCA
TGTTCGATTGCTAAGCCTTCTTCCGAGCCGTCCACAGCTCCTTCTAACCTTGATCGGTTC
TTGGAATCGACGACTCCTTCAGTGCCGGCGCAGTACTTCTCTAAGACTACAATGAGGGGA
TTGAGGACTTGTGACATTGAGTTTCAACATTACTTCACATTGGGTGATTTGTGGGAATCT
TTTATGGAATGGAGTGCGTATGGGGCAGGAGTGCCTTTGGTATTGGATGGGAGTGATCCT
GTTGTTCAATACTATGTCCCATATTTATCAGGCATACAATTATATGTTGAATCTACAACT
TCGAATGCTAAATCAAGGCAAGCTGGCGAGGACAGTGATGGTGACTATTACAGGGACTCA
AGTAGTGATGGAAGTAATGATTACGAATTTGAAAAAGGGATGAAGTTTTCTAGGGAGCAG
CAGGCTTGTCACCATCCAGCAAGTGATGTTCCTATTCAAATGGGCAGGTTGTCTTTAAGG
GAAAAACACAATACAATTCAAGAAGGCTTTTCTAGTGATGATAGTGAGGCTAGCAATTCT
CATGGTCACCTGATTTTTGAGTTTCTTGAGCACAATCCTCCTTATGGTCGAGAACCGTTC
GCCGACAAGATACTAGATCTTGCACGTGAGTATCCTGAGCTGAAAACACTAAGAAGTTGT
GACCTGCTGCCTGTCAGTTGGATGTCTGTGGCATGGTATCCCATATACCGAATACCCATG
GGACAGACATTAAGGGATTTGGATGCTTGCTTTCTAACTTACCATTCTCTTTCTACACCC
ATGAAAGATGGTGGAAGCACACAAGCTGCAGTAGAGGTCTATCCCAGTGAGATGGAGGGT
ATCCCAAAGATTTCATTACCTGTTTTTGGCATGGCTTCCTATAAGTTCAAGGGTTCCATA
TGGAGGCAAAATGGGACATGTGAGCATCAACGGGTGAATTCTCTCGTGCAGGCTGCAGAT
AACCGGTTAAGACTGCTGGAGGTCAATCACCCAGATTTCCAGTTCTTTGTTTCACATGGT
ATGTACCGCAGGTGAATTCGAGAGATTATTCACCCTCCAAATGGTCCTCTTGTCCATGCT
GCAAACATGGCCTGAAAGAACGACATTTCTTGCATGCTCAAGCTGAGGTTAAAAATGTCT
TTGTTATGGAGATTATAGTGGCATGCTGTGCAAGGGAGCTTTATCTGATTTGGATTTCCT
GTTACTTGACAAAGAAAAAGAAAAAAAGAGAAAGAAGGAAAAAGGCAAAAACCACATGAT
TAAAAAAAGGGAACAAAAGAGAAAAAGATAAAGCTTCCATGGAATAGGACGAAGCAGAAT
AAGGGCGAAGATGAGTGGCAAAAACAAAAAATAAAGGCAAATACAATATGAACATGGAGA
TTTATATATATGAGATTAAGCTAAATTGTCCTGATAGATGCTTCTGGGTACTGCTAGCGG
GCATAAGTTCCTTTTGGTTGCAAGATTTCTTTTATATATATTATGTCCTGATAAAGAGAA
TATTTGGTACTTCTATATGTTTCTGTCGGGATTTTGATTTGAATGATGTATAATAGGGCT
TTAAGTAGAGCCTCCCCTCTGGGACACTAACTCATGTGTTGTTTGATTAGTAGGAAAAGC
AAAAAGAAGTGTTTAAATTATATAACTGTTTCAAATAGTTCTTCAATT