Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g03200.t01
CDS Infomation

cds chromosome:12X:17:3087526:3092672:1 gene:VIT_17s0000g03200 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGCTTCGGCATTCGGAACCTGTATGCTTCTCCCATTTCTGCCCGGCCCGGTTCCGG
TCCAGACGACAACTTCGAGTCTCGAGGGCCGGCTCGTCGGTCCCGAGGTTGAGGCCGCCG
GCGGTATTGGTGGCGGCGGCGAGGGAAGCGCATGTGAACAAGCCTTCTGTTTGTACTGCG
GATGAGCTTCACCGCGTGGCTGTCACCGACTCCGACTGGAGCCTCGCTCTGTGGCGGTAC
ACACCTTCTCCGAAGGCGGAGCGGAGGAATCACCCGCTGTTGCTGTTGTCTGGCATTGGA
ACCAATGCTATTGGATTTGATCTTGCTCCTGAGTCTTCTTTTGCACGTTACTTGTCCAAC
CAAGGATTTGATACATGGATTCTTGAACTTCGAGGTGCTGGGTTGAGCACATTAGTAGGG
GAATCCAGGGAAGTTAAGAAGCCTTTCAAGGCTATGTCTGATCGGGTAGGAACAAATGGT
GTTCTTCCTGCAGAAGCACCATCAACCGTAATTTCTGGCACTCTTGTGGAAACTTTTATC
CCTTCTGTCAAAGGAAAAAGAATGGTGGTTGAATCTGATGACGCACAATCGGTGTCAAAG
TTGTCAGAAACTTCTACTCACTTATTTCAAAAGCTCTCTAGGTTTCTAAATGAAGGTGTA
TTTGAAGAAAGGCAAAACTTCTCTATTGCTAGTCAGATCAGGGATTTGAGTGGAAGGCAT
GTAAACATTATTAAAGAAGGTCAATGGACGATTTCACCACCCTTGTTTGACTTGAAGGAG
GTTTTTTTAACACTACTCGATGATTTCCAAAAGCAACTTGACCTGATTTTAAAGTACAAC
TGGGACTTTGATCACCATATGAAAGAGGATGTGCCTGCAGCGATGGAGTATATAAGGACT
CTATGCAAACCAAAGGATGGCAAGTTGCTTGCAATTGGTCACTCCATGGGGGGTATATTG
CTGTATGCAATGCTTTCACAATCTGGTTCTGAAGGAAGGGATTCTGGGCTGGCATCAGTC
ATTACATTGGCATCATCACTTGACTTCACATCTTCAAAATCATCACTGAAATTGCTCTTA
CCCCTGGCTGATCCTGCACAAGCTCTAAATGTACCTGCTATTCCATTAGGGGCATTGTTG
GCAGCTGCTCATCCTCTTATGTCTCTTCCTCCTTATGTATTGTCTTGGTTAACTTCTCTG
GTTTCTGCACAGAAGATCCCTCCTGAGTCACTTGAAAAACTTGTCTTGAACAACTTTGGT
ACAGTACCCTCTAAGCTCCTCTTGCAGCTAACAACAGCTTTCCAAGAGGGTGGACTACGT
GACAGAAATGGAACTTTCTTTTATAAGCATCATCTCCACAAAAGCAATGTTCCTGTTCTA
GCAATTGCAGGAGACCGAGACGTAGTCTGTCCACCTGAAGCTGTATATGAGACAGTCAAG
CACATTCCTGGGAATTTAGTTACTTACAAAGTTTTTGGAGAACCAGATGGTCCACATTAT
GGTCACTATGACTTAGTAGGAGGCCCTTCGGCAGCTGATCAAGTGCATCCATGTTTATCT
AAATTTCTCATCCATCATGATATGGCCTGA

Peptide Sequence

PEP ID

VIT_17s0000g03200.t01
PEP Infomation

pep chromosome:12X:17:3087526:3092672:1 gene:VIT_17s0000g03200 transcript:VIT_17s0000g03200.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MALRHSEPVCFSHFCPARFRSRRQLRVSRAGSSVPRLRPPAVLVAAAREAHVNKPSVCTA
DELHRVAVTDSDWSLALWRYTPSPKAERRNHPLLLLSGIGTNAIGFDLAPESSFARYLSN
QGFDTWILELRGAGLSTLVGESREVKKPFKAMSDRVGTNGVLPAEAPSTVISGTLVETFI
PSVKGKRMVVESDDAQSVSKLSETSTHLFQKLSRFLNEGVFEERQNFSIASQIRDLSGRH
VNIIKEGQWTISPPLFDLKEVFLTLLDDFQKQLDLILKYNWDFDHHMKEDVPAAMEYIRT
LCKPKDGKLLAIGHSMGGILLYAMLSQSGSEGRDSGLASVITLASSLDFTSSKSSLKLLL
PLADPAQALNVPAIPLGALLAAAHPLMSLPPYVLSWLTSLVSAQKIPPESLEKLVLNNFG
TVPSKLLLQLTTAFQEGGLRDRNGTFFYKHHLHKSNVPVLAIAGDRDVVCPPEAVYETVK
HIPGNLVTYKVFGEPDGPHYGHYDLVGGPSAADQVHPCLSKFLIHHDMA

Transcript Sequence

Transcript ID

VIT_17s0000g03200.t01
Transcript Infomation

cdna chromosome:12X:17:3087526:3092672:1 gene:VIT_17s0000g03200 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAATGGCGCTTCGGCATTCGGAACCTGTATGCTTCTCCCATTTCTGCCCGGCCCGGTTCC
GGTCCAGACGACAACTTCGAGTCTCGAGGGCCGGCTCGTCGGTCCCGAGGTTGAGGCCGC
CGGCGGTATTGGTGGCGGCGGCGAGGGAAGCGCATGTGAACAAGCCTTCTGTTTGTACTG
CGGATGAGCTTCACCGCGTGGCTGTCACCGACTCCGACTGGAGCCTCGCTCTGTGGCGGT
ACACACCTTCTCCGAAGGCGGAGCGGAGGAATCACCCGCTGTTGCTGTTGTCTGGCATTG
GAACCAATGCTATTGGATTTGATCTTGCTCCTGAGTCTTCTTTTGCACGTTACTTGTCCA
ACCAAGGATTTGATACATGGATTCTTGAACTTCGAGGTGCTGGGTTGAGCACATTAGTAG
GGGAATCCAGGGAAGTTAAGAAGCCTTTCAAGGCTATGTCTGATCGGGTAGGAACAAATG
GTGTTCTTCCTGCAGAAGCACCATCAACCGTAATTTCTGGCACTCTTGTGGAAACTTTTA
TCCCTTCTGTCAAAGGAAAAAGAATGGTGGTTGAATCTGATGACGCACAATCGGTGTCAA
AGTTGTCAGAAACTTCTACTCACTTATTTCAAAAGCTCTCTAGGTTTCTAAATGAAGGTG
TATTTGAAGAAAGGCAAAACTTCTCTATTGCTAGTCAGATCAGGGATTTGAGTGGAAGGC
ATGTAAACATTATTAAAGAAGGTCAATGGACGATTTCACCACCCTTGTTTGACTTGAAGG
AGGTTTTTTTAACACTACTCGATGATTTCCAAAAGCAACTTGACCTGATTTTAAAGTACA
ACTGGGACTTTGATCACCATATGAAAGAGGATGTGCCTGCAGCGATGGAGTATATAAGGA
CTCTATGCAAACCAAAGGATGGCAAGTTGCTTGCAATTGGTCACTCCATGGGGGGTATAT
TGCTGTATGCAATGCTTTCACAATCTGGTTCTGAAGGAAGGGATTCTGGGCTGGCATCAG
TCATTACATTGGCATCATCACTTGACTTCACATCTTCAAAATCATCACTGAAATTGCTCT
TACCCCTGGCTGATCCTGCACAAGCTCTAAATGTACCTGCTATTCCATTAGGGGCATTGT
TGGCAGCTGCTCATCCTCTTATGTCTCTTCCTCCTTATGTATTGTCTTGGTTAACTTCTC
TGGTTTCTGCACAGAAGATCCCTCCTGAGTCACTTGAAAAACTTGTCTTGAACAACTTTG
GTACAGTACCCTCTAAGCTCCTCTTGCAGCTAACAACAGCTTTCCAAGAGGGTGGACTAC
GTGACAGAAATGGAACTTTCTTTTATAAGCATCATCTCCACAAAAGCAATGTTCCTGTTC
TAGCAATTGCAGGAGACCGAGACGTAGTCTGTCCACCTGAAGCTGTATATGAGACAGTCA
AGCACATTCCTGGGAATTTAGTTACTTACAAAGTTTTTGGAGAACCAGATGGTCCACATT
ATGGTCACTATGACTTAGTAGGAGGCCCTTCGGCAGCTGATCAAGTGCATCCATGTTTAT
CTAAATTTCTCATCCATCATGATATGGCCTGATTGATTATGGAGGCTTATATTCTGCATC
GCCTATTTTTTCTATACCGGAACTCTCATTAACACTGAATTCTTTTGTCAATGAAAAAAG
AAGCTTCCTGCTTGCAAAATCCCAAGGGAAAGAGGGCACTCCAAAATCCCTGATCAGTTT
GTGATGCAAGAAAAATGTGGAGATTTGTACATGTACTGTAAGTATGGTGCTGTTGTATCT
AGTTCTATTCATCACTTGTAAAGACAATATTATATCTCAATATAGAAAAGTAAAAAACAC
AATTC