Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g03170.t01
CDS Infomation

cds chromosome:12X:17:3063849:3066518:-1 gene:VIT_17s0000g03170 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCAAGAGAATCAGATGGGAGGTCATACTATAAAATCTCATGGAGCCAAGGTGGCAAGG
ATACATATGCATGACTGGCTGATTCTGATACTTCTTATTGTTATAGATGTTATTTTAAAT
CTCATTGAGCCCTTTCATCGCTTTGTTGGGGAAGAGATGATGATAGATCTGAAATACCCA
ATGAAAGACAATACTGTACCTGTTTGGGCTGTTCCAATTATTGCAATATTGTTGCCTTTT
GCAGCTATTCTTGCAAATTACTTTTACAGAAGGAATGTTTACGATCTACACCATGCAACA
TTAGGCCTCCTCTATTCTGTTCTAATAACTGGAGTTATAACGGATGCAATTAAAGATGCT
GTTGGTCGACCACGACCGAACTTCTTCTGGCGGTGTTTCCCCAATGGAGCTGCATTGTTT
GATCCTCTAACAAAGAATGTCATCTGTCATGGAGACAAGGGTGTTATAAAGGAAGGACAC
AAAAGTTTCCCTAGTGGGCATACTTCATGGTGCTTTGCAGGTCTGAGTTTCCTCTCTTGG
TATTTATCAGGGAAAATTAGAGCATTTGATCGCAAGGGCCATATAGCAAAACTCGCTATT
GTATTGCTTCCATTGCTTATGGCAGCTCTTGTTGGAGTTTCTCGTGTGGATGACTATTGG
CATCATTGGCAGGATGTTTTTGTTGGAGGTCTCATAGGAATGACTGTAGCTTCATTTTGC
TACCTGCAATGCTTTCCTTTCCCACATGTTAAGGATGGTTGGGCACCACATGCCTATTTT
CAAGTTTTGGCAGAGGGGAACCATGTTCAGTCCTCATCCACAAGAATTCCCTCTCTTAGA
TTAAGGCAGCCAGAGATTGAGGCCGCATATATGCAACCTGGATTTAGCAGAGAAAGCACA
GGAAACGATTGTCATTCTACAAGCCCGATTCTTGATGCAATGGAAAATGGGAGGAGATTT
TGA

Peptide Sequence

PEP ID

VIT_17s0000g03170.t01
PEP Infomation

pep chromosome:12X:17:3063849:3066518:-1 gene:VIT_17s0000g03170 transcript:VIT_17s0000g03170.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MQENQMGGHTIKSHGAKVARIHMHDWLILILLIVIDVILNLIEPFHRFVGEEMMIDLKYP
MKDNTVPVWAVPIIAILLPFAAILANYFYRRNVYDLHHATLGLLYSVLITGVITDAIKDA
VGRPRPNFFWRCFPNGAALFDPLTKNVICHGDKGVIKEGHKSFPSGHTSWCFAGLSFLSW
YLSGKIRAFDRKGHIAKLAIVLLPLLMAALVGVSRVDDYWHHWQDVFVGGLIGMTVASFC
YLQCFPFPHVKDGWAPHAYFQVLAEGNHVQSSSTRIPSLRLRQPEIEAAYMQPGFSREST
GNDCHSTSPILDAMENGRRF

Transcript Sequence

Transcript ID

VIT_17s0000g03170.t01
Transcript Infomation

cdna chromosome:12X:17:3063849:3066518:-1 gene:VIT_17s0000g03170 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAATGCAAGAGAATCAGATGGGAGGTCATACTATAAAATCTCATGGAGCCAAGGTGGCAA
GGATACATATGCATGACTGGCTGATTCTGATACTTCTTATTGTTATAGATGTTATTTTAA
ATCTCATTGAGCCCTTTCATCGCTTTGTTGGGGAAGAGATGATGATAGATCTGAAATACC
CAATGAAAGACAATACTGTACCTGTTTGGGCTGTTCCAATTATTGCAATATTGTTGCCTT
TTGCAGCTATTCTTGCAAATTACTTTTACAGAAGGAATGTTTACGATCTACACCATGCAA
CATTAGGCCTCCTCTATTCTGTTCTAATAACTGGAGTTATAACGGATGCAATTAAAGATG
CTGTTGGTCGACCACGACCGAACTTCTTCTGGCGGTGTTTCCCCAATGGAGCTGCATTGT
TTGATCCTCTAACAAAGAATGTCATCTGTCATGGAGACAAGGGTGTTATAAAGGAAGGAC
ACAAAAGTTTCCCTAGTGGGCATACTTCATGGTGCTTTGCAGGTCTGAGTTTCCTCTCTT
GGTATTTATCAGGGAAAATTAGAGCATTTGATCGCAAGGGCCATATAGCAAAACTCGCTA
TTGTATTGCTTCCATTGCTTATGGCAGCTCTTGTTGGAGTTTCTCGTGTGGATGACTATT
GGCATCATTGGCAGGATGTTTTTGTTGGAGGTCTCATAGGAATGACTGTAGCTTCATTTT
GCTACCTGCAATGCTTTCCTTTCCCACATGTTAAGGATGGTTGGGCACCACATGCCTATT
TTCAAGTTTTGGCAGAGGGGAACCATGTTCAGTCCTCATCCACAAGAATTCCCTCTCTTA
GATTAAGGCAGCCAGAGATTGAGGCCGCATATATGCAACCTGGATTTAGCAGAGAAAGCA
CAGGAAACGATTGTCATTCTACAAGCCCGATTCTTGATGCAATGGAAAATGGGAGGAGAT
TTTGA