Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g03100.t01
CDS Infomation

cds chromosome:12X:17:2913010:2945502:1 gene:VIT_17s0000g03100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGATGAACCCAGATCGACCTCATTGAATGAGAACACAAATGTTGTACCTGATAGT
TGCAAGCGGGGAGGTGATTTTGAGGACGCGGACTCCGTATTGGTTGTCAAGAAGTTAAAA
ACTGAGGCATTGAGTGTGGAAAATGCGAGGGAAGTAGGGAAAAGGCATTTAGATGTGGCA
AGTTGTCAAGAATACTGCAAACCAGAAGTTTCTAATCAAGGAAACAATGACAGTCAGGTG
TGTGAGCAGAATGGTTGTTCGCAGGAGAAGCAAAGTGCGAGGAAAGAGCATTTTGAGATT
GAAGCGGATGCTGCAGAAGATAAGGGTTCTAGGCACAGCATGGAGGATGCATGGGTTGTG
CTTCCTGATGCAAGCTTGGAATTTCCAGGGAAATTGAGATGCGCACATTTTGCAATCTAT
GATGGACATGGTGGTAGGTTAGCTGCTCAGTATGCCCAGAAGCATTTACATGCAAATGTT
CTTTCGGCAGGCTTACCACGTGAGTTGTTGGATGTTAAAGCTGCCAAAAAGGCCATACTA
GATGGTTTTCGAAGAACTGATGAGAGTCTTCTTCAAGAAAGTTTGGCAGGGGGATGGCAG
GATGGTTCAACAGCTGTATGTGTTTGGATATTAGGACAAAAGGTTTTTGTTGCCAACATT
GGAGATGCAAAAGCAGTTGTAGCACGATCATCTACCACCGATGGATCAGAGAATCAGTCA
GATGGAGTAAGTCAATTAAAGGCCATTGTTTTGACAAGGGAACACAAAGCCATTTATCCA
CAAGAACGTGCTCGCATTCAGAAGGCTGGTGGGTCTGTGAGTTCAAATGGACGATTGCAG
GGACGCCTTGAAGTTTCTAGGGCCTTTGGAGATCGCCAGTTCAAAAAGGTGGGCGTTGTT
GCTACTCCAGATGTTCATTCCTTTGACCTCACAGAAAGAGAACACTTCATTATTCTTGGC
TGTGATGGCCTGTGGGGGGTTTTTGGACCTAGTGATGCTGTTGATTTTGTTCATAAAATG
TTGAAGGAGGGCCTACCTGTTGCAACTGTGAGTCGCCGTCTTGTAAGGGAAGCTGTCCGT
GAGCGGCGCTGCAAGGATAACTGTACTGCAATTGTCATTGTTTTCAGGCCCAAGTAG

Peptide Sequence

PEP ID

VIT_17s0000g03100.t01
PEP Infomation

pep chromosome:12X:17:2913010:2945502:1 gene:VIT_17s0000g03100 transcript:VIT_17s0000g03100.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MADEPRSTSLNENTNVVPDSCKRGGDFEDADSVLVVKKLKTEALSVENAREVGKRHLDVA
SCQEYCKPEVSNQGNNDSQVCEQNGCSQEKQSARKEHFEIEADAAEDKGSRHSMEDAWVV
LPDASLEFPGKLRCAHFAIYDGHGGRLAAQYAQKHLHANVLSAGLPRELLDVKAAKKAIL
DGFRRTDESLLQESLAGGWQDGSTAVCVWILGQKVFVANIGDAKAVVARSSTTDGSENQS
DGVSQLKAIVLTREHKAIYPQERARIQKAGGSVSSNGRLQGRLEVSRAFGDRQFKKVGVV
ATPDVHSFDLTEREHFIILGCDGLWGVFGPSDAVDFVHKMLKEGLPVATVSRRLVREAVR
ERRCKDNCTAIVIVFRPK

Transcript Sequence

Transcript ID

VIT_17s0000g03100.t01
Transcript Infomation

cdna chromosome:12X:17:2913010:2945502:1 gene:VIT_17s0000g03100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTTTGCCCCAAACAGTTCCAGTGCTACAATCCAAAGCTAAAGCTAGGGTTTTAGGATTCA
TCCAAAAGAAATTACAGAAGTTTTTCAGGATAGCATGGCTGATGAACCCAGATCGACCTC
ATTGAATGAGAACACAAATGTTGTACCTGATAGTTGCAAGCGGGGAGGTGATTTTGAGGA
CGCGGACTCCGTATTGGTTGTCAAGAAGTTAAAAACTGAGGCATTGAGTGTGGAAAATGC
GAGGGAAGTAGGGAAAAGGCATTTAGATGTGGCAAGTTGTCAAGAATACTGCAAACCAGA
AGTTTCTAATCAAGGAAACAATGACAGTCAGGTGTGTGAGCAGAATGGTTGTTCGCAGGA
GAAGCAAAGTGCGAGGAAAGAGCATTTTGAGATTGAAGCGGATGCTGCAGAAGATAAGGG
TTCTAGGCACAGCATGGAGGATGCATGGGTTGTGCTTCCTGATGCAAGCTTGGAATTTCC
AGGGAAATTGAGATGCGCACATTTTGCAATCTATGATGGACATGGTGGTAGGTTAGCTGC
TCAGTATGCCCAGAAGCATTTACATGCAAATGTTCTTTCGGCAGGCTTACCACGTGAGTT
GTTGGATGTTAAAGCTGCCAAAAAGGCCATACTAGATGGTTTTCGAAGAACTGATGAGAG
TCTTCTTCAAGAAAGTTTGGCAGGGGGATGGCAGGATGGTTCAACAGCTGTATGTGTTTG
GATATTAGGACAAAAGGTTTTTGTTGCCAACATTGGAGATGCAAAAGCAGTTGTAGCACG
ATCATCTACCACCGATGGATCAGAGAATCAGTCAGATGGAGTAAGTCAATTAAAGGCCAT
TGTTTTGACAAGGGAACACAAAGCCATTTATCCACAAGAACGTGCTCGCATTCAGAAGGC
TGGTGGGTCTGTGAGTTCAAATGGACGATTGCAGGGACGCCTTGAAGTTTCTAGGGCCTT
TGGAGATCGCCAGTTCAAAAAGGTGGGCGTTGTTGCTACTCCAGATGTTCATTCCTTTGA
CCTCACAGAAAGAGAACACTTCATTATTCTTGGCTGTGATGGCCTGTGGGGGGTTTTTGG
ACCTAGTGATGCTGTTGATTTTGTTCATAAAATGTTGAAGGAGGGCCTACCTGTTGCAAC
TGTGAGTCGCCGTCTTGTAAGGGAAGCTGTCCGTGAGCGGCGCTGCAAGGATAACTGTAC
TGCAATTGTCATTGTTTTCAGGCCCAAGTAGTTTCAAAATGCAACTGACTTCATGCTAAA
AAGAAAATTTTTGTTGCTGGATGTCATGCAAAGTGAGGCTCTGCTCTTTGGTTTTGTGTA
CCACAAATGTTGCTCTTGTCCTGTTTATTTCTGCCTAATGTTATGGCAGGTCAGGAA