Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g02680.t01
CDS Infomation

cds chromosome:12X:17:2495970:2498824:1 gene:VIT_17s0000g02680 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAACAAGAAGGGAGCATGGGCGGTGCTGTGGGTGATCGTTGTAATCCAATGCGTCGCA
GATGCAGCGGAGCACAATGAGGAGTCGCTGATATTCAACACCCATGGACTGAGCAGAGAG
AGCTTCCCCAAGGGCTTCGTCTTCGGCACCGCCACGTCAGCTTACCAGGTCGAGGGCATG
GCTGACAAGGACGGCCGAGGACCAAGCATTTGGGATGTCTTCATTCGAAAACCCGGGATT
GTGGCGAATAATGGCACTGGAGAGGTGGCGGTTGACCAGTATCACCGGTACAAGGAAGAT
ATAGACCTGATGAAGAGTCTTAATTTTGAAGCATACCGCTTCTCAATCTCATGGTCCAGG
ATTTTCCCAGAGGGAACTGGGAAAGTGAATTGGAAGGGAGTTGCTTACTACAATAGACTG
ATCAACTACCTGCTCAAAAAAGGCATTACCCCATATGCAAATCTCTATCACTATGACCTT
CCTTTGGCACTTGAGAAGAAATACAATGGGTTATTGAGTTACAGAGTAGTGAAAGATTTT
GCGGATTATGCTGACTTTTGCTTCAAGATGTTTGGAGACAGAGTGAAGAATTGGATGACA
TTTAATGAGCCAAGAGTGGTGGCTGCTCTTGGCTATGATAATGGTTTCTTTGCTCCAGGG
AGGTGCTCCAAGGAGTATGGAAACTGTACTGCTGGGAACTCTGGAACAGAGCCTTACATT
GTGGCACATCATTTGATTTTGTCCCATGCAGCTGCCGTTCAGAGATACAGGGAGAAATAT
CAAAAAGAACAAAAGGGGAGGATTGGAATTCTCTTGGATTTTGTTTGGTATGAGCCTCTT
ACAAGATCAAAGGCTGACAACCTAGCAGCTCAAAGATCCAGAGACTTTCATGTTGGATGG
TTTATTCACCCCATTGTATATGGAGAGTATCCGAGAACAATGCAAGAGATTGTTGGAGAT
AGACTGCCCAAGTTCACAAAAGCGGAGGTGAAGATGGTGAAAGGATCGATGGATTTCGTG
GGAATCAACCAGTATACAGCCTACTACATGTATGATAAGCCGAAACCCAAAGTCCCTGGC
TACCAGGAGGACTGGCATGCTGGATTTGCTTATGAAAAGCATGGAGTGCCAATTGGTCCA
AGGGCATATTCTAGCTGGCTCTACAAAGTTCCTTGGGGTCTTTACAAAGCTGTGACCTAC
ATAAAAGAGCGATATGGAAACCCCACTGTGATTTTGTCAGAAAATGGCATGGATGATCCG
GGTAATGTCACCCTTTCTCAGGGATTGCATGACACAAAAAGGGTCAACTTCTACACAAAC
TATTTGACTGAGCTAAAGAAGGCAATCGATGATGGAGCAAATGTAATTGGCTACTTTGCA
TGGTCATTGCTGGACAACTTTGAATGGAGACTAGGATACACTTCAAGGTTCGGCATTGTC
TACGTTGACTGGAGGACCCTCAAGAGGTATCCTAAAATGTCTGCCAAGTGGTTCAAGCAG
ATGCTTGCTCAGAAGGGGCATTAG

Peptide Sequence

PEP ID

VIT_17s0000g02680.t01
PEP Infomation

pep chromosome:12X:17:2495970:2498824:1 gene:VIT_17s0000g02680 transcript:VIT_17s0000g02680.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MNKKGAWAVLWVIVVIQCVADAAEHNEESLIFNTHGLSRESFPKGFVFGTATSAYQVEGM
ADKDGRGPSIWDVFIRKPGIVANNGTGEVAVDQYHRYKEDIDLMKSLNFEAYRFSISWSR
IFPEGTGKVNWKGVAYYNRLINYLLKKGITPYANLYHYDLPLALEKKYNGLLSYRVVKDF
ADYADFCFKMFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSKEYGNCTAGNSGTEPYI
VAHHLILSHAAAVQRYREKYQKEQKGRIGILLDFVWYEPLTRSKADNLAAQRSRDFHVGW
FIHPIVYGEYPRTMQEIVGDRLPKFTKAEVKMVKGSMDFVGINQYTAYYMYDKPKPKVPG
YQEDWHAGFAYEKHGVPIGPRAYSSWLYKVPWGLYKAVTYIKERYGNPTVILSENGMDDP
GNVTLSQGLHDTKRVNFYTNYLTELKKAIDDGANVIGYFAWSLLDNFEWRLGYTSRFGIV
YVDWRTLKRYPKMSAKWFKQMLAQKGH

Transcript Sequence

Transcript ID

VIT_17s0000g02680.t01
Transcript Infomation

cdna chromosome:12X:17:2495970:2498824:1 gene:VIT_17s0000g02680 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAGCTTACTGAAAAATATGAACAAGAAGGGAGCATGGGCGGTGCTGTGGGTGATCGTTGT
AATCCAATGCGTCGCAGATGCAGCGGAGCACAATGAGGAGTCGCTGATATTCAACACCCA
TGGACTGAGCAGAGAGAGCTTCCCCAAGGGCTTCGTCTTCGGCACCGCCACGTCAGCTTA
CCAGGTCGAGGGCATGGCTGACAAGGACGGCCGAGGACCAAGCATTTGGGATGTCTTCAT
TCGAAAACCCGGGATTGTGGCGAATAATGGCACTGGAGAGGTGGCGGTTGACCAGTATCA
CCGGTACAAGGAAGATATAGACCTGATGAAGAGTCTTAATTTTGAAGCATACCGCTTCTC
AATCTCATGGTCCAGGATTTTCCCAGAGGGAACTGGGAAAGTGAATTGGAAGGGAGTTGC
TTACTACAATAGACTGATCAACTACCTGCTCAAAAAAGGCATTACCCCATATGCAAATCT
CTATCACTATGACCTTCCTTTGGCACTTGAGAAGAAATACAATGGGTTATTGAGTTACAG
AGTAGTGAAAGATTTTGCGGATTATGCTGACTTTTGCTTCAAGATGTTTGGAGACAGAGT
GAAGAATTGGATGACATTTAATGAGCCAAGAGTGGTGGCTGCTCTTGGCTATGATAATGG
TTTCTTTGCTCCAGGGAGGTGCTCCAAGGAGTATGGAAACTGTACTGCTGGGAACTCTGG
AACAGAGCCTTACATTGTGGCACATCATTTGATTTTGTCCCATGCAGCTGCCGTTCAGAG
ATACAGGGAGAAATATCAAAAAGAACAAAAGGGGAGGATTGGAATTCTCTTGGATTTTGT
TTGGTATGAGCCTCTTACAAGATCAAAGGCTGACAACCTAGCAGCTCAAAGATCCAGAGA
CTTTCATGTTGGATGGTTTATTCACCCCATTGTATATGGAGAGTATCCGAGAACAATGCA
AGAGATTGTTGGAGATAGACTGCCCAAGTTCACAAAAGCGGAGGTGAAGATGGTGAAAGG
ATCGATGGATTTCGTGGGAATCAACCAGTATACAGCCTACTACATGTATGATAAGCCGAA
ACCCAAAGTCCCTGGCTACCAGGAGGACTGGCATGCTGGATTTGCTTATGAAAAGCATGG
AGTGCCAATTGGTCCAAGGGCATATTCTAGCTGGCTCTACAAAGTTCCTTGGGGTCTTTA
CAAAGCTGTGACCTACATAAAAGAGCGATATGGAAACCCCACTGTGATTTTGTCAGAAAA
TGGCATGGATGATCCGGGTAATGTCACCCTTTCTCAGGGATTGCATGACACAAAAAGGGT
CAACTTCTACACAAACTATTTGACTGAGCTAAAGAAGGCAATCGATGATGGAGCAAATGT
AATTGGCTACTTTGCATGGTCATTGCTGGACAACTTTGAATGGAGACTAGGATACACTTC
AAGGTTCGGCATTGTCTACGTTGACTGGAGGACCCTCAAGAGGTATCCTAAAATGTCTGC
CAAGTGGTTCAAGCAGATGCTTGCTCAGAAGGGGCATTAGGCATTTGGAGTATGCCTTTC
GTCTGTTTTAGTTTTAGGTCTAGTTTAAATGTAAATGGTGCCTTTGTTGAAGAACTGGGA
ACTCCATCAGGCATCCAGAACGTTTCCTTCTTTAGGTTTAGTGTTCTATGGAATGGCGGT
TTGTAATACTCAAAACACCATTAAATAAATCTGTTACTCAATACTTGAGTTTCAGGCTTT
CTTT