Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g02600.t01
CDS Infomation

cds chromosome:12X:17:2401206:2402977:1 gene:VIT_17s0000g02600 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCCCAAGCTCTTCTCCTTCTCGTCTTTTGCTTTCTTCTGCCAATCTTTCAGGCACTG
CCGGAGCCAGACCCAGTTAAGATCCATCCGTTCCACCCAAACCCATCTCCGCCGGAGACC
ATTCCGGCGTTCCCCGAGCAGTCCGACGTCGCCGGCTGCCCGCTCAACCTCCCGGACGAG
CTCTTCCACGGGATAAAGACCGCCTGCAGCGCGGGGAAAGGGGCGTCCGGGGAGCTACGA
CGGAGCCGGTGCTGCCCGGTCCTGGCGGCCTGGCTGTACTCCGCGTACTCGGGGACTGCG
CTGGGGAGGGCAAAGAGGGGGTTGGCTCCCGAAGCGACGCCGTACGACCTGCCGTTGTTG
CCCGACGATTCGGAGACGTGTGTGAATGACTTGGAAAAATCTCTGAAGAGCAGAGGCGTG
GAATTGGTGAAGCCAAACGAGACTTGCGATGTTGTGTACTGCTTCTGTGGCATTCGGCTT
CACCCCCTGAGTTGCCCGGAGGCGTTCTCAGTGTCGTCCAAAGGCAAGCTCGTCGGGGAC
GAGAGTGTGAAGAAATTAGAAAGAGATTGCCTGAGCACCAATGGATTTCCAGGCCTTGGC
GGCTGTTCCAAATGCTTGAACACCCTCTACCTGCTTGGTAAGGACAAAACTGGGAATTCA
AGCAAATTGGAGGCCAGATCACGTAAGATGCACAACAGGGACTGCGAGCTCATGGGTCTG
ACGTGGCTCCTCGCCAAGAACCGAACCGCCTACATCCACACAGTCTCAGCCGTCTTAAGA
GCCATCATGATGAGCACCGACGGCTCTGATCCTCTGTCGTGCACTCTCAACAGTGACGGA
ATGCCCCTGGCCGTTGATTCCGCTGAAATTTCTTCTCACTCCTCGTCAACCTCCCTCCAT
TTCTCCATCCATCTCTGCATCTTATCCCTCTCTTTCCTGTACGCTCACCTCGCTGTATCA
TTCCCCGAGGCCTCCCTTTGGTGA

Peptide Sequence

PEP ID

VIT_17s0000g02600.t01
PEP Infomation

pep chromosome:12X:17:2401206:2402977:1 gene:VIT_17s0000g02600 transcript:VIT_17s0000g02600.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSQALLLLVFCFLLPIFQALPEPDPVKIHPFHPNPSPPETIPAFPEQSDVAGCPLNLPDE
LFHGIKTACSAGKGASGELRRSRCCPVLAAWLYSAYSGTALGRAKRGLAPEATPYDLPLL
PDDSETCVNDLEKSLKSRGVELVKPNETCDVVYCFCGIRLHPLSCPEAFSVSSKGKLVGD
ESVKKLERDCLSTNGFPGLGGCSKCLNTLYLLGKDKTGNSSKLEARSRKMHNRDCELMGL
TWLLAKNRTAYIHTVSAVLRAIMMSTDGSDPLSCTLNSDGMPLAVDSAEISSHSSSTSLH
FSIHLCILSLSFLYAHLAVSFPEASLW

Transcript Sequence

Transcript ID

VIT_17s0000g02600.t01
Transcript Infomation

cdna chromosome:12X:17:2401206:2402977:1 gene:VIT_17s0000g02600 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACACAACCATCCGCCAGCAATGTCCCAAGCTCTTCTCCTTCTCGTCTTTTGCTTTCTTCT
GCCAATCTTTCAGGCACTGCCGGAGCCAGACCCAGTTAAGATCCATCCGTTCCACCCAAA
CCCATCTCCGCCGGAGACCATTCCGGCGTTCCCCGAGCAGTCCGACGTCGCCGGCTGCCC
GCTCAACCTCCCGGACGAGCTCTTCCACGGGATAAAGACCGCCTGCAGCGCGGGGAAAGG
GGCGTCCGGGGAGCTACGACGGAGCCGGTGCTGCCCGGTCCTGGCGGCCTGGCTGTACTC
CGCGTACTCGGGGACTGCGCTGGGGAGGGCAAAGAGGGGGTTGGCTCCCGAAGCGACGCC
GTACGACCTGCCGTTGTTGCCCGACGATTCGGAGACGTGTGTGAATGACTTGGAAAAATC
TCTGAAGAGCAGAGGCGTGGAATTGGTGAAGCCAAACGAGACTTGCGATGTTGTGTACTG
CTTCTGTGGCATTCGGCTTCACCCCCTGAGTTGCCCGGAGGCGTTCTCAGTGTCGTCCAA
AGGCAAGCTCGTCGGGGACGAGAGTGTGAAGAAATTAGAAAGAGATTGCCTGAGCACCAA
TGGATTTCCAGGCCTTGGCGGCTGTTCCAAATGCTTGAACACCCTCTACCTGCTTGGTAA
GGACAAAACTGGGAATTCAAGCAAATTGGAGGCCAGATCACGTAAGATGCACAACAGGGA
CTGCGAGCTCATGGGTCTGACGTGGCTCCTCGCCAAGAACCGAACCGCCTACATCCACAC
AGTCTCAGCCGTCTTAAGAGCCATCATGATGAGCACCGACGGCTCTGATCCTCTGTCGTG
CACTCTCAACAGTGACGGAATGCCCCTGGCCGTTGATTCCGCTGAAATTTCTTCTCACTC
CTCGTCAACCTCCCTCCATTTCTCCATCCATCTCTGCATCTTATCCCTCTCTTTCCTGTA
CGCTCACCTCGCTGTATCATTCCCCGAGGCCTCCCTTTGGTGAACTCATCTGTAACGCAC
GTACATTGTATTGTATTCGTTTGTTGTAATTTTGGTGATTTGACGAGGGTAGATAAGGAA
AACTTTTATATGGTAGTTGGAGTTGGGCCACGCGGCCCACCACAGACGTGGTCCATGGCC
CATGTGCGTGGGCCAAGGTTTTTGACAACGTTTTTTTGTTTTTTTGGTGGCATTATTTGA
TGGGCAGCCTACAAAACGGTTGGGCCTCATGCACAATTTAAGGGAATGTCAACATCATAC
TTGGTGGTAGAGGGCCATTTTATCATA