Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g02550.t01
CDS Infomation

cds chromosome:12X:17:2349564:2352090:-1 gene:VIT_17s0000g02550 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGACCCAGCACCACCCCCACCGCTCCCTCCACCACCGCCACCTCAACCTCCGGCAGCC
TCCGAGGCACACGTAGCTCATGCCGCCAACCCTACCCCTAGCCACGGACCACCGCACAAC
CACCCGCCCTACGCCGAGATGATAACAACGGCAATTGGGGCTTTGAATGAGAGAACGGGG
TCGAGTAAGAAAGCTATAGCGAAGTACATAGAAAGAACTTTCGGCGACTTGCCGCCGAGT
CATCCGGCGTTGTTGACTCACCATCTAAAGAGATTGAGAAGCAGTGGTCAAGTTGTGATG
GTGAAACACTCCTACATGCTCCCCAGATCTGGAGATGATGCTCACGCTCTCCCCCTTCAT
CCTGGGCCTGTCTCTGGGCCCAAGAGGGGTCGTGGCCGGCCCCCCAAGCCCAAGATCCCC
GTCCAGCCCACTTCGGAGTCGGTGCTCGTGGCTGTGGGGTTGGTAGATGGGCCCGTGGTG
CCGAAGAGGGGCCCTGGGCGTCCGCCTAAGTCTGGTGGTGTGCGTGGGCCGAGGCCCAAG
TCGTTAGATGGACCCAAAAGGAGGCCTGGCCGTCCACCCAAGGCCCAGTTGGGTGGGGTG
ATTCCTGGCGGGGTGCCGAGGGAGCGGCCCAGGACGGCAGGTGTTACTAAGGTGAAGGTG
TCCGGGAGGCCACGTGGTAGGCCGCCGAAGATTCTGACTGTTGGTGCCGGCGTCGGTGGA
GGTCTCTCTGTGAAACGGCGGGGCCGGCCTCCTAAGGCTGACGGACCGAAGAGGCCCAAG
AAGCTTACTGGAAGGCCAGTGGGCCGGCCCAGAAAGAAACTTGCAACTGGGGAAATTCTG
CCAGCTGCTTCCGAACAACCAGTGGCAGAGTGGATGAACTACGAGGATCTTAAGCAAAAA
CTGGAGCACATTCAAGGAAAGATCAAACTGTCTGTCGGTGTGCTAAGGACCCAGTTCAGC
GAGAACAATGTGAGTGCGATGTCAGCATTACAGGAGTTGGAAGACCTGGCGACTATGGAC
ATTAGTGCGCCACTAAATATCGAAGGTCAGCTGTTCTTTGGAAATTGA

Peptide Sequence

PEP ID

VIT_17s0000g02550.t01
PEP Infomation

pep chromosome:12X:17:2349564:2352090:-1 gene:VIT_17s0000g02550 transcript:VIT_17s0000g02550.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDPAPPPPLPPPPPPQPPAASEAHVAHAANPTPSHGPPHNHPPYAEMITTAIGALNERTG
SSKKAIAKYIERTFGDLPPSHPALLTHHLKRLRSSGQVVMVKHSYMLPRSGDDAHALPLH
PGPVSGPKRGRGRPPKPKIPVQPTSESVLVAVGLVDGPVVPKRGPGRPPKSGGVRGPRPK
SLDGPKRRPGRPPKAQLGGVIPGGVPRERPRTAGVTKVKVSGRPRGRPPKILTVGAGVGG
GLSVKRRGRPPKADGPKRPKKLTGRPVGRPRKKLATGEILPAASEQPVAEWMNYEDLKQK
LEHIQGKIKLSVGVLRTQFSENNVSAMSALQELEDLATMDISAPLNIEGQLFFGN

Transcript Sequence

Transcript ID

VIT_17s0000g02550.t01
Transcript Infomation

cdna chromosome:12X:17:2349564:2352090:-1 gene:VIT_17s0000g02550 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCTCTCTCCCTCTCCCTCTCCCTCTCCCCGTCTCTCTCCTCTCTCTTTTCTCCGCTTTCT
CTCTCTACATGGACCCAGCACCACCCCCACCGCTCCCTCCACCACCGCCACCTCAACCTC
CGGCAGCCTCCGAGGCACACGTAGCTCATGCCGCCAACCCTACCCCTAGCCACGGACCAC
CGCACAACCACCCGCCCTACGCCGAGATGATAACAACGGCAATTGGGGCTTTGAATGAGA
GAACGGGGTCGAGTAAGAAAGCTATAGCGAAGTACATAGAAAGAACTTTCGGCGACTTGC
CGCCGAGTCATCCGGCGTTGTTGACTCACCATCTAAAGAGATTGAGAAGCAGTGGTCAAG
TTGTGATGGTGAAACACTCCTACATGCTCCCCAGATCTGGAGATGATGCTCACGCTCTCC
CCCTTCATCCTGGGCCTGTCTCTGGGCCCAAGAGGGGTCGTGGCCGGCCCCCCAAGCCCA
AGATCCCCGTCCAGCCCACTTCGGAGTCGGTGCTCGTGGCTGTGGGGTTGGTAGATGGGC
CCGTGGTGCCGAAGAGGGGCCCTGGGCGTCCGCCTAAGTCTGGTGGTGTGCGTGGGCCGA
GGCCCAAGTCGTTAGATGGACCCAAAAGGAGGCCTGGCCGTCCACCCAAGGCCCAGTTGG
GTGGGGTGATTCCTGGCGGGGTGCCGAGGGAGCGGCCCAGGACGGCAGGTGTTACTAAGG
TGAAGGTGTCCGGGAGGCCACGTGGTAGGCCGCCGAAGATTCTGACTGTTGGTGCCGGCG
TCGGTGGAGGTCTCTCTGTGAAACGGCGGGGCCGGCCTCCTAAGGCTGACGGACCGAAGA
GGCCCAAGAAGCTTACTGGAAGGCCAGTGGGCCGGCCCAGAAAGAAACTTGCAACTGGGG
AAATTCTGCCAGCTGCTTCCGAACAACCAGTGGCAGAGTGGATGAACTACGAGGATCTTA
AGCAAAAACTGGAGCACATTCAAGGAAAGATCAAACTGTCTGTCGGTGTGCTAAGGACCC
AGTTCAGCGAGAACAATGTGAGTGCGATGTCAGCATTACAGGAGTTGGAAGACCTGGCGA
CTATGGACATTAGTGCGCCACTAAATATCGAAGGTCAGCTGTTCTTTGGAAATTGAGAGA
AGATGTGATGTGCAGGGATGGAGGACCCAACCTCAATGTGACACCAAGAGCTGGAGGGGG
GAGTAGTTTAACAAAGAGCTCAGGGAAAGGTTCAGGCAAGAGGTGAGAAAAATGGATGCG
GTTTAATGGTCAAGAATGGAGATTAACATGAGGTTGGTGGTTGGTGCCACTTATGGGATG
CCCATGAGTCATGTTGTATCTGAACTGATTTTGAACTAATTTGGAGACTTTTGTAATGTG
GGACTTGTCGAATTGAAGAGCAATGACAGGCTTCATCGCCCTTTCTTTCTT